EMLSAP00000007004, EMLSAP00000007004 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000007004
Unique NameEMLSAP00000007004
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length500
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015812Integrin beta subunitPRINTSPR01186INTEGRINBcoord: 57..76
score: 49.44
coord: 17..35
score: 38.01
coord: 119..141
score: 54.75
coord: 86..105
score: 33.33
coord: 146..161
score: 59.03
coord: 472..485
score: 64.55
coord: 190..213
score: 37.65
IPR015812Integrin beta subunitPANTHERPTHR10082INTEGRIN BETA SUBUNITcoord: 1..490
IPR015812Integrin beta subunitPROSITEPS00243INTEGRIN_BETAcoord: 383..396
IPR015812Integrin beta subunitPROSITEPS00243INTEGRIN_BETAcoord: 426..439
IPR015812Integrin beta subunitPROSITEPS00243INTEGRIN_BETAcoord: 472..485
IPR002369Integrin beta subunit, N-terminalSMARTSM00187INBcoord: 1..318
e-value: 1.5E-39
score: 147.4
IPR002369Integrin beta subunit, N-terminalPFAMPF00362Integrin_betacoord: 3..274
e-value: 7.7E-80
score: 268.7
NoneNo IPR availableGENE3D2.10.25.10coord: 466..490
e-value: 2.2E-8
score: 33.3
coord: 414..454
e-value: 1.8E-12
score: 46.3
NoneNo IPR availableGENE3D2.10.25.10coord: 372..413
e-value: 5.4E-7
score: 28.9
NoneNo IPR availablePANTHERPTHR10082:SF16INTEGRIN BETAcoord: 1..490
NoneNo IPR availableSUPERFAMILY53300vWA-likecoord: 15..255
NoneNo IPR availableSUPERFAMILY69179Integrin domainscoord: 276..322
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 466..488
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 412..444
IPR002035von Willebrand factor, type AGENE3D3.40.50.410coord: 16..251
e-value: 3.5E-74
score: 249.0
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 20..154
score: 8.738

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000007004 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000007004EMLSAT00000007004-702851Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000007004 ID=EMLSAP00000007004|Name=EMLSAP00000007004|organism=Lepeophtheirus salmonis|type=polypeptide|length=500bp
MNDTYELQLNPRNWTDPPLDIYFLIDATKSMEKYKQSISEQIGILNSTLG
NLTTNCHFGFGEFGEKPLSPYISTIPSKLNKPCAGCEASFGFKNHLSLSR
NISVLRDLITDSPLIGNIDHPEATLDGIMQALVCTEEMGWRKNSIKLLII
ITDAGFHIAGDGKLGGIVGPNDGKCHLNSQGEYTSSTKQDYPSIGHVNYE
AYNRSIQLLFQVSSDQIDFYNSLKDVFNGSKVVLLEEAPSKAAAFVFEQI
HDIISSTEFSDNSTDLFSISYSSASNLTVDIIAPSCPKDLWARNHVIQIT
SKGIQESWLIVVELVCECDCENPGHSSYVESAEHCHFNGDLICGDCQCNL
VMGHGEHCETVCRDYEREDLLDQCRSSENSPVCSNRGVCECGSCFCRPRE
NRNERVYGQYCECDNFSCDRYNGILCSGNGVCECGRCKCRREWRVPGYDA
CECKASLSTFMNPFRKYEGEICSGNGNCVCGECKCEEGYSVFLNFIIYIK
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