EMLSAT00000007149, EMLSAT00000007149-702996 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007149
Unique NameEMLSAT00000007149-702996
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s402supercontigLSalAtl2s402:878025..878915 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007149 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007149EMLSAG00000007149-689915Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000031414EMLSAE00000031414-740342Lepeophtheirus salmonisexon
EMLSAE00000031415EMLSAE00000031415-740343Lepeophtheirus salmonisexon
EMLSAE00000031416EMLSAE00000031416-740344Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779973auto779973Lepeophtheirus salmonispolypeptide
EMLSAP00000007149EMLSAP00000007149Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007149

>EMLSAP00000007149 ID=EMLSAP00000007149|Name=EMLSAP00000007149|organism=Lepeophtheirus salmonis|type=polypeptide|length=231bp
MNSKMIFLLSFFFLGVSYGSPQGELVKKLFADYDLSVHPGSPNSIGKVEF
TANPLCMDLSLDGVLEGRVWIHMSWMDDRLVWNPEDHKGINQLRLINCGS
QTLCHISKIQEEFNALVYSNGKVLYIPDTKLRLYCDNANLTDVWAVHECN
IKYGSWTFDNNLMELVEIKHPVDVSEFVKFCPMKTLEVIKELKIKAYVCC
PEHYASFDYTLKLQRKFLKTDAGLIYNPKLY
back to top

mRNA from alignment at LSalAtl2s402:878025..878915+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007149-702996 ID=EMLSAT00000007149-702996|Name=EMLSAT00000007149|organism=Lepeophtheirus salmonis|type=mRNA|length=891bp|location=Sequence derived from alignment at LSalAtl2s402:878025..878915+ (Lepeophtheirus salmonis)
ATGAATAGCAAAATGATTTTTCTTCTCTCATTTTTTTTTCTCGGAGTCTC
CTATGGAAGCCCTCAAGGGGAATTAGTAAAGAAACTCTTCGCAGACTATG
ACCTCTCTGTTCATCCTGGATCTCCAAACTCCATTGGTAAAGTGGAGTTT
ACAGCCAACCCTCTTTGCATGGATTTATCCCTGGATGGAGTTCTAGAAGG
TCGTGTATGGATTCATATGTCTTGGATGGATGATAGACTAGTCTGGAATC
CAGAAGATCATAAAGGAATCAATCAATTACGAGTACCAGTTAATAAATTG
TGGAAGCCAGACATTGTGCCATATATCAAGTAAATTTTAAGATCATCTAC
ATCTTTCCTAAAATATATCTTTGTCTCAGTTGTACAGTAAGAATATATAT
ACTGGGGGGGGGGGGRGGGGGTCAAGKGTTGTTACTGGATAAATGCCCTT
YTTAGCTGATAACTCTTTTATCTTTTTCTTTTCCTTTTAGAAATTCAAGA
GGAGTTCAATGCTCTCGTTTACTCGAATGGTAAGGTACTATATATTCCTG
ATACAAAGCTTAGACTTTACTGTGACAATGCTAATTTAACCGACGTATGG
GCTGTCCATGAATGTAATATAAAGTATGGTTCTTGGACGTTTGATAACAA
TTTGATGGAATTGGTTGAGATCAAACATCCTGTTGATGTAAGCGAATTTG
TGAAATTTTGCCCAATGAAAACATTGGAAGTAATAAAGGAATTGAAGATA
AAAGCTTATGTGTGCTGTCCCGAGCACTATGCCTCATTTGATTATACATT
GAAACTTCAAAGAAAGTTCTTGAAAACGGATGCTGGACTCATTTACAATC
CAAAATTGTATTAAAAGAAAAATATATTATTTAATTCTAAA
back to top
Add to Basket