EMLSAT00000007170, EMLSAT00000007170-703017 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007170
Unique NameEMLSAT00000007170-703017
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s403supercontigLSalAtl2s403:335451..336936 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007170 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007170EMLSAG00000007170-689936Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000031501EMLSAE00000031501-740429Lepeophtheirus salmonisexon
EMLSAE00000031502EMLSAE00000031502-740430Lepeophtheirus salmonisexon
EMLSAE00000031503EMLSAE00000031503-740431Lepeophtheirus salmonisexon
EMLSAE00000031504EMLSAE00000031504-740432Lepeophtheirus salmonisexon
EMLSAE00000031505EMLSAE00000031505-740433Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776524auto776524Lepeophtheirus salmonispolypeptide
EMLSAP00000007170EMLSAP00000007170Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007170

>EMLSAP00000007170 ID=EMLSAP00000007170|Name=EMLSAP00000007170|organism=Lepeophtheirus salmonis|type=polypeptide|length=373bp
MRLITLLLIIFVKYLSTCESENKFGLLYSNIARDREDNYSCCCSSDTKCL
ISPSKSKTCSNPYHSFCCYESYERYMCDKTESTDFYQPCPSHTPLAKNQC
GTRDYQVIRSFDNGQSHPEEFPWVCIILTKNNEYVGTCVIIPEKFDNEIF
HNTHKVLTVAHKLSKVNSYRQLKIRVLEYNIDGFRTPERHQHKEYEVAEM
IIHDKFNRRRLKYDIAILRTNKPIDLHDVGVNAACLPSCDNMFAHTFPNG
SGVRCWIAGWGKNELDKSFNIIQRKVNLPLISDEQCEHQVKSALKNFSLK
VSMKFKLHKTEICAGGEGKTYCQGDGGAPLVCQSKEGYWHVVGLAAWGIG
CARNNVPGVYXKVSQFKKWIERH
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mRNA from alignment at LSalAtl2s403:335451..336936-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007170-703017 ID=EMLSAT00000007170-703017|Name=EMLSAT00000007170|organism=Lepeophtheirus salmonis|type=mRNA|length=1486bp|location=Sequence derived from alignment at LSalAtl2s403:335451..336936- (Lepeophtheirus salmonis)
ATGCGACTTATAACTTTGTTATTAATCATCTTTGTCAAATACCTTTCAAC TTGTGAGTCGGAAAACAAATTTGGCCTTCTTTATTCTAATATAGGTATTT ATTATTTAAATATAAATAATTATTATTTACATTAAACAAAGTATGAATTA TATACATTTACTTTCGTTTTTTAATTAAAAGCCCGAGATCGAGAGGATAA TTACTCATGCTGCTGTTCATCAGATACTAAATGTTTAATTGTAAGTACCT GCATATAAATGAACTAAATCATTAACTTATTATAACTATTATTCATGTAC ATCTTTTTTTTAAATTTTAGTCTCCTTCAAAATCCAAAACTTGTAGCAAT CCTTACCATAGCTTCTGCTGTTATGAATCCTATGAAAGATATATGTGTGA TAAAACAGAATCCACGGATTTCTATCAACCATGTCCCAGTCATACTCCCC TAGCTAAAAATCAATGTGGAACAAGAGACTACCAAGTAATTCGAAGCTTC GATAATGGGCAAAGTCATCCTGAAGAGTTTCCATGGGTTTGTATAATACT CACAAAGAATAACGAATATGTTGGAACTTGCGTTATTATTCCTGAAAAAT TCGACAATGAAATCTTTCACAATACTCATAAAGTATTGACTGTTGCTCAT AAATTATCTAAAGTGAATAGCTATAGGTAGGTAAACCCGTGCATATGTGT ATATTTATATAATTGTTTTTTTTAAATTTCACAAGGCAATTAAAGATTCG AGTATTGGAGTATAATATTGACGGATTCAGGACTCCTGAGAGACATCAAC ACAAAGAATATGAGGTTGCTGAAATGATTATTCATGATAAATTCAACAGG AGAAGATTAAAATATGATATTGCCATTTTGAGAACGAATAAACCAATTGA CTTACATGACGTTGGCGTTAATGCTGCGTGTTTGCCATCTTGTGATAATA TGTTTGCTCATACTTTTCCGAATGGGTCTGGAGTAAGGTGAGATAATAAT TACCTACCTACTATAATTTAAGATTAAGTATTGGAAATGAAATTGCCATT CTTTGAATRTTATATACATGCCTAATTAAAAACGATCATTGATTAATTCG TTTTCTTTTTACTCAATGTGGTAAGATGCTGGATTGCAGGATGGGGAAAG AATGAACTTGATAAATCTTTCAACATAATTCAAAGAAAAGTCAATCTTCC TCTCATCAGTGATGAACAATGTGAGCATCAGGTGAAGTCTGCGTTGAAAA ATTTTAGTCTAAAAGTTTCTATGAAATTTAAGCTACATAAAACTGAAATT TGTGCCGGAGGAGAAGGAAAAACATATTGTCAAGGAGATGGAGGTGCACC ATTAGTGTGCCAGTCAAAAGAAGGTTATTGGCATGTTGTAGGTCTTGCAG CATGGGGAATTGGTTGTGCACGAAATAATGTTCCGGGTGTTTATRCTAAA GTTTCGCAATTTAAAAAATGGATTGAAAGACATTGA
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