EMLSAT00000007176, EMLSAT00000007176-703023 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007176
Unique NameEMLSAT00000007176-703023
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s404supercontigLSalAtl2s404:192541..194702 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007176 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007176EMLSAG00000007176-689942Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000031517EMLSAE00000031517-740445Lepeophtheirus salmonisexon
EMLSAE00000031518EMLSAE00000031518-740446Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774252auto774252Lepeophtheirus salmonispolypeptide
EMLSAP00000007176EMLSAP00000007176Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007176

>EMLSAP00000007176 ID=EMLSAP00000007176|Name=EMLSAP00000007176|organism=Lepeophtheirus salmonis|type=polypeptide|length=673bp
MNLIDSEGGHRYEILSLLGQGGFGKVYRALDENGQDVAIKALDISILLRT
PHLKERVNEEVRIHSKLNHNSILSFKNVFQDSTHVYIILEYCPHGDLAAH
LRKNRGKAFAAQDCLRWFRQYSSFNPLSSILIIQQILSGIEYLHRNLIVH
RDLTLANCLLDSGYNVKIGDFGLATQLRAKNEVHNTMCGTPISIAPEIVS
RVPSDPEPADVWGLGCILYTLLVGTSPFETEGIRSTMRKVVCEEPEFPSS
LSVEAKDLLSRMLKKNPSLRISLKDIGNHPFILGEKLTSTIKNSTASWDS
GIGTTGYSVNNASDVRRSFNKLMNNPTSSLIRQRSWSEISSIPKVDQSRE
PPSTLSIASAPSSSSRPISIASPLKAHRLRPTSKKHQLKVGTACILNGAE
VQLEFPQKKEGHIIETFLVSPDGKNIAISSIKRRENYTYELLPKKYWQKY
NYAARYIKFVREKTPKITYWSDKAKFQLMENGPAASFEAQFYEHLDSTKI
VFTSQTGIRLSTKDGESLGSYSYPLSLKADDSNGEKLRHFEEFHTRCKRI
EDLLESNEATIGSSFPLTVGKKPPSLEFVDSMSNNPQPPIMRSSVSNFSV
RSHGIRSFFSDRTTRVDFEDDTRIELGPDDEIKYYKNGRLIPLSKYELPH
EVKIKLARIDSHIKTLRSNPTPS
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mRNA from alignment at LSalAtl2s404:192541..194702-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007176-703023 ID=EMLSAT00000007176-703023|Name=EMLSAT00000007176|organism=Lepeophtheirus salmonis|type=mRNA|length=2162bp|location=Sequence derived from alignment at LSalAtl2s404:192541..194702- (Lepeophtheirus salmonis)
ATGAATTTGATCGACTCGGAGGGCGGCCATCGTTACGAAATCCTTAGCCT
CTTGGGCCAAGGTGGATTTGGAAAGGTATATCGTGCATTGGATGAGAACG
GTCAGGACGTGGCCATCAAGGCCCTGGACATCTCCATCCTTCTCCGAACG
CCTCATTTGAAGGAACGAGTGAATGAAGAAGTCCGGATTCACTCCAAGTT
GAATCATAACTCCATTCTATCCTTTAAAAACGTGTTCCAAGACTCGACTC
ATGTCTATATTATCCTGGAATATTGTCCACATGGAGATTTGGCCGCGCAT
TTACGGAAAAATCGTGGGAAAGCCTTTGCGGCCCAGGATTGTCTTCGCTG
GTTTAGGCAATACTCAAGCTTCAACCCTTTAAGCTCCATTCTTATTATCC
AGTGCCTTTTCTTTCACTTTTTTATAAGTCAAATACTTCAAAAATGAAGT
TTCATCCATCATATAGTTAGTAATTAATTAATATTCTTGATATGAATGGA
GCTTAAACTAATTTATGATATATTCCCAATTCGACATATAGACAAATATT
ATCTGGAATCGAGTATCTTCATCGCAACTTGATTGTCCATCGAGATTTGA
CACTCGCAAATTGCCTCCTTGATTCAGGTTACAACGTTAAAATCGGAGAT
TTTGGCCTTGCGACTCAACTAAGGGCAAAGAATGAAGTACATAATACAAT
GTGTGGTACTCCAATATCCATTGCTCCCGAAATTGTGTCTCGAGTTCCTT
CTGATCCTGAGCCTGCGGATGTATGGGGCTTAGGATGTATTCTCTATACG
CTTTTAGTAGGAACGTCTCCATTTGAAACAGAAGGGATTCGTAGTACTAT
GAGGAAAGTAGTATGTGAGGAACCCGAGTTTCCTTCATCTTTATCAGTTG
AGGCCAAGGATCTTTTGAGTCGAATGCTTAAAAAGAATCCCTCTCTAAGG
ATTTCTCTTAAAGACATTGGGAATCATCCTTTTATTCTGGGAGAGAAACT
CACCTCTACTATAAAGAACTCAACCGCTTCTTGGGATAGTGGAATTGGAA
CGACGGGATATTCTGTCAACAATGCTTCGGATGTACGTCGCTCCTTTAAT
AAACTAATGAATAACCCCACTTCATCGCTTATTCGCCAGAGAAGCTGGTC
GGAAATCTCTAGTATTCCAAAAGTGGATCAATCTCGAGAGCCTCCCTCGA
CACTGAGCATAGCTTCAGCACCTTCATCTAGTTCAAGACCCATTAGTATT
GCATCCCCTCTTAAGGCACATCGCTTAAGACCCACTTCTAAGAAACATCA
ACTCAAAGTTGGAACTGCCTGTATTTTGAATGGGGCAGAAGTTCAATTGG
AGTTTCCTCAAAAGAAGGAAGGTCACATCATTGAAACCTTCCTCGTCTCT
CCGGATGGTAAAAACATTGCTATTTCATCAATAAAAAGGAGGGAAAACTA
CACCTATGAACTTCTACCCAAAAAATATTGGCAAAAGTACAACTATGCTG
CTCGTTACATCAAATTCGTGCGAGAAAAGACTCCAAAAATTACCTATTGG
AGCGATAAAGCTAAATTCCAATTAATGGAAAATGGACCTGCTGCTTCTTT
TGAGGCACAATTCTATGAACATTTAGACTCTACAAAGATTGTATTTACCT
CGCAAACAGGAATTCGACTTTCTACCAAGGATGGGGAAAGTCTGGGTTCC
TACAGTTATCCCCTATCTCTAAAGGCCGATGACTCCAACGGAGAGAAGCT
TAGGCATTTTGAGGAATTTCATACTCGTTGTAAACGCATTGAAGATCTAT
TAGAATCCAACGAAGCAACCATTGGCTCATCTTTTCCTTTAACAGTTGGT
AAAAAACCACCTAGTCTTGAATTTGTAGATTCCATGAGTAATAATCCTCA
ACCCCCTATTATGAGAAGCAGTGTTTCGAACTTTTCTGTAAGAAGCCACG
GAATACGATCCTTCTTCTCTGATCGTACAACACGAGTGGACTTTGAAGAC
GACACAAGAATAGAACTAGGCCCCGATGATGAAATTAAGTACTATAAAAA
TGGACGACTCATACCCTTATCCAAATATGAGTTACCTCATGAAGTCAAAA
TCAAATTAGCAAGGATTGATTCCCACATAAAGACCCTACGCTCTAATCCT
ACACCTTCCTGA
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