EMLSAT00000007221, EMLSAT00000007221-703068 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007221
Unique NameEMLSAT00000007221-703068
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s404supercontigLSalAtl2s404:589165..592216 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007221 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007221EMLSAG00000007221-689987Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000031701EMLSAE00000031701-740629Lepeophtheirus salmonisexon
EMLSAE00000031702EMLSAE00000031702-740630Lepeophtheirus salmonisexon
EMLSAE00000031703EMLSAE00000031703-740631Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778767auto778767Lepeophtheirus salmonispolypeptide
EMLSAP00000007221EMLSAP00000007221Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007221

>EMLSAP00000007221 ID=EMLSAP00000007221|Name=EMLSAP00000007221|organism=Lepeophtheirus salmonis|type=polypeptide|length=684bp
MNSSFKIKEPSHYYNLGVPSYQRLPFPQDHKIKLFIQPYLNGHKKESSTV
SSTTSSKLKTEKLFVEPYALSIVSKRVSKPLKKEVDEGYNVVNVEEETTS
KATQKRSSSTTALDDDEEEVEMIPVPKKRRIIKYSFNNKSTINSSSPSSS
SGVSGVSSPSSKDKVFKSQFSSVSDKRMKESESSSKTDSQTMIKLSNGQF
IRVPQSMLVNIELFKQKSQALTVSPVIHQTSVSLSSPSCESIAKVVVKEK
KAVTSVAPQTINVVGSTTITTKQPMITAKKLNPIVPSTKMSPTIIQPVNS
LGATPPIILSSLIERTKTINLPKTLNTINASSMIAKKSLTIERPTSRVIP
SSSSQQQRGKSLSSIVVNSQSPQSHIIALKTHEKNGQVIYLKSVPNPKSP
TPGATRLIVAQPQPNQRLTTTNIQQVLNQTGTHPGVQLPLKLVNQPASSI
EGISTTPRNPVIVKRLIPSDLPRLNSQVNKGKPCSNSVGSPLNVPQKDLL
SFAVSETKKEKRRPLSSTPHPIKLLKYRNSPTSSKSSSSFSSRKVLNSKS
NYVHVLARKGSMNEHHVLSTSTSVSSHFKTNQMQLDKEHNSCYYYIDEGL
PKGWFAQVEFLPEHNKTEIYHITVDNLRLRSGEELWDYLMHGVVPCSSSP
KRSNRLILGGIPKNMPLRREMPIRKAVVNLTSLW
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mRNA from alignment at LSalAtl2s404:589165..592216+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007221-703068 ID=EMLSAT00000007221-703068|Name=EMLSAT00000007221|organism=Lepeophtheirus salmonis|type=mRNA|length=3052bp|location=Sequence derived from alignment at LSalAtl2s404:589165..592216+ (Lepeophtheirus salmonis)
GTCGCTAGTGAGGAGTCCTTGGCTTGGTGTTCCCTGTAGATCTCTGTGAG
GACTGCCGTTTGCTCATTACCTTACTTATTAATACAACACGCATAATTTA
TGATCATTTGATTCATTTCTCCAATTAATTAAAGAGTATTCATGAGATGA
ATTCCTCCTTCAAGATAAAGGAACCTTCTCACTACTATAACCTTGGGGTT
CCCTCATATCAGCGACTTCCCTTCCCGCAGGATCACAAAATTAAACTCTT
CATTCAGCCCTACGTAAGAACGTCTTCCTTCGATTCACACTCCASCATCC
ACTCAATACTCTCTTATTTAGTGTCTATCTCTTGAGTCAAAGTCGTTGCG
TCACTTTTTACCATTGAATTTCAGCTCCAAAGTTGAGGAATCTATATTTT
GGGATCATGATTTTTATCATTTTTTGTTTGATTCTCTAGTAAACTCCCTT
GAATCCTCACTGCATAGTTGCCCCCACAAATTCCTCTCTTCCCCCTCGTT
CTCCTATCATTTGTGTATTTTTTGGAATCTTTGTTCTATTTTTGATTAAG
AAGTTGTTGGTTGAATTAAGGCTAGAAGTCTCGGAAGTCGCACTTTCATT
CTAAACATTTTCTTTAATACCATTCCAAGATACGCACATTTCCCAAACCC
AGAGTACTTTCTCTCTACATGTGCTTAAAAATATTGACTTGTTCTATAAT
ATTTATATACCTAAACCCCCATTAGTTTAATTAATGTCATTTAAAACCTC
TTTCTTTCTCTCTCTCTCCTAGCTTAATGGACACAAAAAGGAATCATCAA
CTGTTTCGAGCACAACGTCCTCCAAATTAAAAACTGAAAAACTTTTTGTT
GAGCCCTATGCCCTTTCCATAGTTTCAAAGCGAGTGTCGAAACCCCTCAA
GAAGGAAGTGGACGAAGGGTACAATGTCGTTAATGTTGAAGAAGAAACTA
CTTCGAAAGCTACACAAAAAAGGTCGTCATCCACTACAGCTCTGGATGAT
GATGAGGAAGAAGTGGAGATGATACCGGTTCCGAAGAAACGACGGATAAT
CAAATATTCCTTTAATAACAAGTCAACAATCAATTCGTCATCGCCTTCTT
CTTCTTCTGGTGTTAGCGGTGTTTCTTCACCATCATCCAAGGATAAGGTT
TTTAAATCTCAATTTTCATCAGTGAGTGATAAAAGAATGAAGGAGTCAGA
ATCCTCCTCCAAAACGGACTCACAGACAATGATCAAGTTGAGTAACGGTC
AATTCATTCGTGTGCCTCAAAGTATGCTTGTAAATATTGAGTTATTTAAA
CAAAAGTCACAAGCTCTGACGGTTAGCCCCGTTATTCATCAAACCTCAGT
GTCCTTATCTTCTCCTTCTTGCGAGTCAATTGCTAAAGTGGTAGTCAAGG
AGAAGAAAGCAGTGACTTCTGTTGCTCCTCAGACTATCAATGTTGTTGGG
TCGACTACCATAACGACAAAACAGCCTATGATTACTGCAAAAAAGCTTAA
TCCGATTGTCCCTTCTACTAAAATGTCTCCTACAATTATTCAGCCTGTAA
ATAGTTTAGGGGCCACACCCCCAATTATATTATCCTCACTGATCGAAAGA
ACAAAAACAATTAATCTTCCAAAGACTCTAAATACTATAAATGCGTCGTC
TATGATTGCAAAGAAATCTCTAACTATTGAGAGACCCACCTCCCGTGTTA
TTCCTTCTTCTTCTTCTCAACAACAACGGGGAAAATCCTTATCATCAATT
GTCGTTAATTCTCAATCACCCCAATCCCACATAATTGCACTAAAGACACA
TGAAAAGAATGGGCAAGTAATCTATCTCAAGTCTGTTCCGAATCCAAAGT
CCCCAACTCCTGGTGCTACTCGTTTAATTGTAGCTCAACCCCAGCCCAAT
CAGAGACTGACTACAACAAATATTCAACAGGTGCTGAATCAAACAGGGAC
ACATCCAGGAGTTCAATTGCCTCTGAAATTAGTAAACCAGCCTGCATCTT
CCATAGAGGGCATTTCAACAACCCCCAGGAATCCAGTTATAGTCAAACGA
TTAATTCCTTCTGATTTACCACGCTTAAATTCTCAAGTCAACAAGGGAAA
GCCGTGTTCCAACTCTGTAGGATCCCCACTCAATGGTAAATATAGAGACA
TTAAGAAATTGTCCCAAACTCTTAAGCATGTTTTAAGCCAATCAACAGAT
CCGTTTGTAATTCTTTCTAATGAATCAGAATCGCCCAAAGAGGTGAAACT
TAAAACAATGGTTAATGTAAAAAGTGAATTAGACCCTTTATTAAATATTG
ATGCTGATTCTAAATCTTGTTTTAAAAACAACCATGATTATTCTTGTACT
CTTAGGGGCGTTAAGTTGAGTGAAGCTCTCATGGATATTTCAAAGCGTGG
GATTTTTGTGGATAKAACGGCTGMCAAAGTGGYTTCCTCGTCTTGCTCCG
GACAAATATCTACAGTGAATATTCAAGTTCCACAAAAGGATCTCTTAAGT
TTTGCAGTTTCTGAGACGAAAAAAGAAAAGAGAAGGCCCTTGTCTTCTAC
TCCGCATCCGATTAAGTTGTTAAAATATAGGAATTCACCAACTTCTTCCA
AATCCTCATCTTCTTTTAGCAGCAGAAAGGTTTTAAATTCAAAATCCAAT
TATGTTCATGTTCTGGCTCGTAAAGGCTCTATGAATGAACATCACGTTTT
ATCTACTTCCACTAGTGTAAGCTCACATTTTAAGACAAATCAAATGCAAT
TAGATAAAGAACATAATTCATGTTATTATTATATTGATGAAGGTCTTCCT
AAAGGTTGGTTTGCTCAGGTAGAGTTTCTTCCAGAACACAATAAAACTGA
AATATATCATATTACTGTAGATAATTTGAGACTACGATCTGGAGAAGAAT
TGTGGGACTATCTCATGCATGGAGTTGTGCCTTGTTCATCATCCCCAAAA
CGCAGCAATAGATTAATTCTTGGAGGTATACCTAAAAATATGCCCCTACG
ACGGGAAATGCCTATAAGGAAAGCAGTTGTTAATTTGACATCCCTATGGT
GA
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