EMLSAT00000007442, EMLSAT00000007442-703289 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000007442
Unique Name	EMLSAT00000007442-703289
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s424	supercontig	LSalAtl2s424:9759..17379 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000007442 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000007442	EMLSAG00000007442-690208	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000032641	EMLSAE00000032641-741569	Lepeophtheirus salmonis	exon
EMLSAE00000032642	EMLSAE00000032642-741570	Lepeophtheirus salmonis	exon
EMLSAE00000032643	EMLSAE00000032643-741571	Lepeophtheirus salmonis	exon
EMLSAE00000032644	EMLSAE00000032644-741572	Lepeophtheirus salmonis	exon
EMLSAE00000032645	EMLSAE00000032645-741573	Lepeophtheirus salmonis	exon
EMLSAE00000032646	EMLSAE00000032646-741574	Lepeophtheirus salmonis	exon
EMLSAE00000032647	EMLSAE00000032647-741575	Lepeophtheirus salmonis	exon
EMLSAE00000032648	EMLSAE00000032648-741576	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto768878	auto768878	Lepeophtheirus salmonis	polypeptide
EMLSAP00000007442	EMLSAP00000007442	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s424:9759..17379+

protein sequence of EMLSAP00000007442

>EMLSAP00000007442 ID=EMLSAP00000007442|Name=EMLSAP00000007442|organism=Lepeophtheirus salmonis|type=polypeptide|length=1423bp
MSNLGLQDILHLAQRAVKYDEAGNHEPAIYYYREVAQLLQQSFPSTFEYT
QKAEKYKERAKTLEKSAGKTLDEKSKNVSEDADFLKAVFLVEEGLSEDEA
GNSKEAIELYGSAVELCLKARSTXKDAGLKDKLSQLASEALTRAEKIKNT
GKKVHKPAMPPLGLLKLDDEEANEKKSRGHGYSEEEKRVLAKTSLINGRE
YVPFMSVDFKERFGFPMPFNDKHGKLSVSIKQKMKLKSWSRPEEFMKEPK
IFEVVDCYSVKQTVVSDCSFLASIAVAAQYEKKFKKRLISSIIFPKNKNG
DPVYNPCGKYMVKLRVNGVSRKVVIDDFLPLGDNNELICSYSSNRNELWV
SLLEKAYMKVMGGYDFPGSNSNIDLYALTGWIPERLGIKKNDPNFEKDKA
FKKIHDRFHKGDVLVTFATGDIGDFAADRAGLVQKHAYAMLDVREVNGVK
LFLVKNPWAHLRWRGNYSEIDNRNWTRELKAALNYNPESAANFDNGVFWI
DFDSVLEFFEVIYMNWNPNLFKFSYSIHQSWDAGVGPVKDMFYFSNNPQY
LLELTAPGPGALWILLSRHITDIEDFKNNKEYIALMVYKNKGKRIYXPVD
PPPFLDAVKINTPLYLVQTVIKDDTDRKFTLVVSQFEKSTTINYSLRVFS
TLPFTLRKLEQAYKYKKEITNGQWKGSTAGGSSTFGDEYKGNPRYQLKID
TDSEVLVELKGPRQFFIGFDIMSVVVANTSSPKFFNLKQSGPFRPAFAVL
ALDLLAGTYDIIPCTFKPKQESPFFLTQMTFYAIPPNGFMHMEKMISLGR
KRLQFFEVMQDLVNESKPFENEEKDSFFSNVDIEKLHDRLSELHYLSESV
MEETPHDKTAFCLLQLVVAYSDNFELSEFIIRGEQNLFKYRLQISEGHIT
QEVLLRLIQDLDLLYENDKSMLTITSVLKGICQPYTSIPIPFQYLTKLVA
RREIEXRDGNALITKDVEKEFLLSVFQFLYQRGIKNLRNSNNDEFRLPYM
MNNLIRFFLQEICPKLYRHNLASSDNIQTLSVHFPLCFHQLYLILMNENR
LRHDSRIAFTLFLKEIGVSLNGSISFWSMNYSKESKSSGCNHSWQKDQRK
LLYSIRHSYGLEGNKINYSAHSCSSIQKNSYKGPNEQLICPFTNQGNGFA
HPDIEDLVQSRQPSKACERYFAHLKQSHVQTTLLKPSDYFFSSFNIEKES
MVVAMEYDDRHRIFLQGIMNLGIVSGSTARKLLQKACNISGHTVPTDTGE
INKTLRALTDGINREIRPLNLSIVKSNDGPFTRGEIERTRALNLGGKVKS
KNLKPLEVEEILDKFIEKNWLRSLENDVICFTPRFIAEMETYLRFVYPND
VLTCSLCNKLVIKALSCTCSKHFHLYCLGNAAPKGQNLGELTEISCPKCK
HPIPLTHSLPTQSQRRKRSNSDE

mRNA from alignment at LSalAtl2s424:9759..17379+

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000007442-703289 ID=EMLSAT00000007442-703289|Name=EMLSAT00000007442|organism=Lepeophtheirus salmonis|type=mRNA|length=7621bp|location=Sequence derived from alignment at LSalAtl2s424:9759..17379+ (Lepeophtheirus salmonis)
ATGTCTAACTTGGGGCTTCAAGATATCCTTCATTTAGCTCAAAGGGCTGT
GAAATATGATGAGGCTGGAAACCATGAACCTGCGATTTACTATTATCGAG
AAGTAGCTCAACTACTTCAACAAAGTTTCCCTAGCACTTTTGAATATACA
CAAAAGGTAATTGAATACATCTTTAGTTCCTCATTATATATATTAATTAA
TTGTTGAAGGCCGAAAAGTACAAAGAAAGAGCCAAGACCTTGGAAAAGTC
TGCTGGGAAAACGTTGGATGAGAAGTCAAAGAATGTCTCCGAAGATGCAG
ATTTCTTGAAAGCAGTCTTTCTCGTAGAGGAAGGCTTATCCGAAGATGAA
GCCGGTAATTCTAAAGAGGCTATTGAACTCTATGGCTCTGCGGTTGAACT
TTGTCTTAAGGCCCGATCAACGGKAAAGGATGCTGGTTTGAAGGATAAGC
TTTCTCAATTAGCCTCCGAAGCTCTAACAAGAGCTGAAAAGATAAAAAAC
ACGGGCAAAAAGGTCCATAAGCCAGCTATGCCTCCTTTGGGTCTTTTGAA
ACTGGATGATGAAGAAGCGAATGAGAAAAAGAGCCGAGGACATGGCTATT
CAGAAGAAGAGAAACGAGTATTGGCCAAAACATCTCTCATTAATGGTAGA
GAGTATGTACCTTTTATGAGTGTGGATTTTAAAGAAAGATTTGGGTTTCC
AATGCCTTTTAACGATAAGCATGGAAAATTAAGTGTATCCATCAAACAAA
AGATGAAGTTAAAATCTTGGTCTAGGCCGGAAGAATTTATGAAAGAACCC
AAAATATTTGAAGTTGTTGATTGTTATAGTGTTAAACAAACTGTTGTGTC
CGATTGTTCATTTTTAGCCTCCATTGCCGTTGCCGCACAGTATGAAAAAA
AATTTAAAAAGAGACTCATTTCTTCGATTATTTTCCCTAAAAATAAAAAT
GGAGATCCTGTTTATAATCCTTGTGGAAAATATATGGTGAAACTCCGCGT
CAATGGCGTTTCAAGAAAAGTTGTCATAGATGATTTTTTACCTCTTGGAG
ATAATAATGAACTAATATGCTCATATTCGTCTAATCGTAATGAATTATGG
GTGTCATTACTTGAAAAGGCTTATATGAAGGTTATGGGTGGCTATGATTT
TCCTGGATCAAATAGTAATATAGATTTGTACGCTCTCACAGGCTGGATAC
CTGAACGTTTAGGAATAAAAAAGAATGATCCTAATTTTGAAAAAGACAAG
GCATTTAAAAAGATACATGACCGTTTTCATAAAGGTGATGTACTAGTGAC
GTTTGCTACTGGTGATATTGGAGATTTTGCTGCAGATAGAGCGGGCTTAG
TTCAAAAACATGCCTATGCCATGTTGGATGTCAGAGAAGTCAATGGTGTC
AAGTTATTTCTTGTAAAAAATCCTTGGGCCCATCTTCGTTGGCGCGGTAA
TTATTCAGAAATTGATAATCGTAACTGGACTCGAGAATTGAAGGCTGCGC
TTAATTATAACCCGGAGTCAGCTGCTAATTTTGATAATGGAGTTTTTTGG
ATAGATTTTGACTCCGTCCTAGAATTTTTTGAAGTGATATATATGAACTG
GAACCCTAATTTATTCAAGTTTAGTTATTCGATTCATCAGAGTTGGGATG
CTGGAGTTGGACCCGTTAAAGACATGTTTTATTTTTCCAATAACCCACAA
TATCTACTTGAGCTAACAGCTCCTGGCCCTGGTGCTTTATGGATCCTTCT
TTCAAGACACATTACTGATATTGAAGATTTTAAAAATAATAAGGAATATA
TTGCCTTAATGGTTTACAAAAATAAGGGAAAGCGTATTTACTMCCCTGTC
GATCCMCCGCCATTTTTAGATGCTGTTAAAATCAATACTCCATTATATCT
TGTGCAAACAGTTATCAAGGATGATACAGATCGAAAATTTACTTTAGTTG
TTTCACAATTTGAAAAATCAACAACCATTAACTATTCCCTCAGGGTTTTC
AGTACCCTTCCGTTTACATTGAGAAAATTGGAACAAGCTTATAAGTATAA
AAAAGAAATAACTAATGGACAATGGAAAGGGAGTACTGCAGGTGGATCTT
CAACTTTTGGAGATGAATACAAAGGCAATCCCAGATATCAGCTCAAAATT
GATACTGATAGTGAAGTTCTTGTGGAATTGAAGGGTCCTAGACAATTTTT
TATTGGATTCGATATAATGTCCGTAGTAGTTGCCAACACGTCTTCACCCA
AATTTTTTAACTTAAAACAGTCTGGACCTTTTAGACCTGCATTTGCAGTT
TTAGCTCTGGATTTACTCGCAGGAACTTATGATATCATACCCTGTACCTT
CAAACCAAAACAAGAGTCGCCATTTTTTCTTACTGTTCAATGTACTAGTC
CTTTTAAATTGGGAAGATTATCCTAAAATATAGCAATGAGTTATAGTATT
TACTTTTTAAGATTGTATTACTTATATATATATATATTTTCTGTCTTTAC
TAGCAAATGACATTTTATGCTATTCCTCCGAATGGGTTTATGCATATGGA
GAAGATGATAAGTTTGGGAAGGAAGCGTCTTCAATTTTTTGAAGTCATGC
AGGATTTAGTAAATGAATCAAAACCGTTCGAAAATGAGGAGAAAGACAGT
TTCTTTTCCAATGTTGATATTGAAAAGCTTCATGATCGATTGTCGGAGTT
ACATTACTTGTCAGAAAGTGTCATGGAAGAGACTCCTCATGATAAAACAG
CATTTTGTCTTTTGCAATTGGTTGTTGCATATAGTGATAATTTTGAACTC
TCAGAATTTATTATTCGTGGGGAGCAAAATCTCTTCAAGTATAGACTTCA
AATAAGTGAGGGACATATTACTCAAGAAGTGCTTCTTAGACTCATACAAG
ACTTGGATTTATTGTATGAAAATGATAAAAGTATGCTAACAATCACTAGT
GTATTGAAGGGCATTTGTCAGCCCTATACCAGTATTCCCATTCCTTTTCA
ATATCTTACTAAGCTTGTGGCTCGACGAGAGATCGAAGKAAGGGATGGTA
ATGCCTTAATTACAAAGGATGTTGAAAAAGAATTTTTATTGTCTGTTTTT
CAGTTTCTGTACCAAAGAGGTATTAAAAATCTTCGTAACTCAAATAACGA
TGAATTTCGTTTGCCCTATATGATGAATAATCTAATCCGCTTTTTTTTAC
AAGAAATTTGTCCAAAACTTTATCGACATAATTTGGCATCTTCTGATAAC
ATACAGACACTATCCGTTCATTTTCCTCTATGCTTTCATCAACTGTACCT
TATATTAATGAATGAGAATAGACTTAGACACGACTCCAGAATTGCCTTTA
CATTGTTTTTGAAGGAAATAGGGGTTTCCTTGAATGGTTCAATTAGTTTC
TGGTCTATGAATTACTCAAAAGAAAGTAAGTCCAGTGGATGTAACCATTC
CTGGCAGAAGGATCAGCGAAAACTTCTGTACAGTATCAGACACTCTTATG
GTTTGGAAGGGAATAAAATAAACTATTCAGCTCATAGTTGTTCAAGCATT
CAAAAAAATTCGTATAAAGGACCAAATGAGCAATTAATTTGCCCATTTAC
CAATCAGGGGAACGGTTTCGCTCATCCAGATATAGAAGATTTAGTGCAAT
CGAGACAGCCCTCTAAAGCTTGCGAAAGATATTTTGCTCATTTAAAGCAG
TCACATGTTCAAACAACACTCTTAAAACCCTCAGATTATTTCTTCAGCTC
ATTTAATATTGAAAAGGAATCGTGAATACTCTTCTGGTTTACATATTACT
TAGTCATGATTGCGAATTTTATCGATATGAATTAAGGTTCTACAATTTAT
AGTTAATTTAAAAAAAAAAATTATATTATTGTAGGGATTCATTCTGAAGT
AGGTAGCTAAAATAATTTTTATACGTATGTCTAAAAATGTTAAAATATAT
GGTTACTAATATTTGGGAAATGATAGATAATTGTCATTTTTAAGGGATGG
GTTGACTTTTATATATTTAGCAGTATTATAATATAATACATTATAAGGAA
CACCGTGCATGCTTGAAATACTAGTTAGATCTGGGCATATAAAATACTTT
ATATAGAGCGTTTTCACTGACATTATAATTAAAGAAGATGCCAATTTGGG
AGGTGAAATTGATATTTTAAAAAACTAAAATGGACGAATTTCCAATAAAT
CTTGATCAAATGGCGTTAGAAATATTGTATTGAATATAATTTTATGCAAA
TGTAGAATTGTGATATTTGAATGGACAAATTTTCCAATAAACCTTGATGA
GACATCAAATGGCTCTAAGAATAAAAAGAAATTAANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAA
AAACTACCTATGAAATGTTTAAATTTGTACAATATATATATAATTTTTTT
TTTTGATCGATTAGATACAAGAAAATCAGGATAATTATAGAAAATTATAT
TATTATTTCCATTACAATATTTAATTTGTATCTTCAGTATGGAATAACGT
AGTAATCAAATATTTTTAACATATTTTAGGGTCCGATATATAATAAAACT
AGGTAATAGATTTTTGATAGATAATAAAGTTTAAATCCTTTTATTTGTTA
GTCTCATTTTGACATGAAATATTTAATTATTTTCCTTACTATTAATCAAA
AAAGGGGTTTTATTGTTATAAACCATGGTTTTTTAGGCCCCCAAAATGGC
CTAGATTAAAAATGCTGACGTCACAAGAAAACGTTCTTTCGTAATTCATA
AGGAACAACATGAATATTTGAAAGACTAGCTAGGGTTTTGGGCATATAAA
ACAACTCTTTAATAGGATCAGGCTATGAATAAATAGCTAAAATAGCTAGA
GCAGGATCCTATTATATTTGGGAGGTTGGGTTGCTAAAAAATGACGGCGG
GAATATTTTATTATGACAAGAAACTAACATGATGTAAACAGAATAACAGA
GCCAATGAAAAAGAAATAAAGCTCGAATGATTATTATTTTTGACAGGAAT
TTGCGTATAGTAGTAGAAATGAAATACTCGTACCTCTCATTGGGTCAAGT
AAATAGGATATTTAAAATTTTTAACCACTAGTTTTNNNTCATTTTTAAAA
CAATAAGTAATAACTATTCATTAATAATATACATACTAGTATACTTTGTA
ATTATCAATTTGATATTATACCTAGTCCGACTAGTATAGTATGGTTGTTG
CGATGGAGTACGACGACAGACATCGAATCTTTCTTCAAGGAATCATGAAT
TTGGGGATAGTGTCCGGATCTACCGCTCGGAAGCTTTTGCAAAAAGCTTG
TAATATCAGTGGACGTAAGTGTTTATAATTTAGTTTAATTAACTGACTTG
GATAACTTTTATTTCATTGTGATGTTGCAGATACAGTCCCAACAGACACC
GGAGAAATCAACAAAACTTTGCGTGCCTTGACTGATGGAATTAATAGGGA
AATTCGGCCCTTGAATCTATCTATTGTCAAAGTATGATTCAAATATGTAT
CTCCTATTAATAAGCCGGGCATTTAATCATTTACTCCTAATTACAGGCCA
TAGACGAAAACAAGATAAAAAAGAAACTTATTTCGTTCTAATCAATCAAT
TGGATCGCTCTCAAGAATTCACGGAATTAACAAAGAGGTTTTCGAATTTG
TCTATCCTTCATATATACTTGTACGTGACCATTCATTACAGCAGCTTTTA
TCAGGTCCATGGTCGAATTTGCTCCACATGAACTTGAGCTTCTTAAGATA
TTGATTGGAGAGATGATGAAAGGCCCTGAACTAGAAGAGGAAAGTGATAG
TGATGAGGAAACGGAGAGTAATGATGGACCTTTTACAAGGGGTGAAATTG
AAAGAACAAGAGCTTTGAACTTGGGTGGTAAAGTCAAATCCAAGAATTTA
AAACCACTAGAAGTTGAAGAAATACTTGATAAATTTATTGAAAAGAGTAA
GGTTGCTTTGATTCCTTCACAAGAATTTGAGTATAATATGTATTTTTTTA
GATTGGCTAAGATCGTTGGAGAATGATGTTATTTGCTTTACGCCCAGGTT
TATTGCTGAAATGGAAACATATCTTCGTTTTGTTTATCCAAATGATGTTT
TGACATGCAGTTTATGCAATAAGTTGGTTATCAAGGTGAGCAAATCATAT
CAACATTTTTAAACCTTTGATAGAACACATAAAGTTGCATATTTGAGTTT
ATATATTTAAAACTCAAATCCCTAGTCCTGATACATATATATATATATAA
TGGACGTAATTATTAAATTCGAGTTGACCTTGTTATGCAACTACATATGT
TATATTTCAAATTTCCTAATTGACATATGTCAAAATTGAATAATATGAGT
AAATGGATGCATCTTCGTTAATATTGTATAAGCTTTAGACATAATCCTTG
TTTTTGGTTGTTTTATTTCGCCACTTTTTAACTATTACACAATAACACTT
CTTCTTGGAAGTTGAGATTATCAAGGATTTCATCTTTATCTTAGAGCTGA
ATGACTAAAAATAAACTCTTTTACTTATACATTTAATAATAATAGATAAC
GTACTTCCACAGAATATAATAATTGTGATATTTAAAATCAATATTACTTA
ATAAGAAAAGATAGATACCTGATTCAATATTACATATTTGAGAAGATCAT
GAGTAAATAAACCTCCTTGATTCTTCATAACTAGTCTATCTTATATTACA
GATATTGAGTCTCATATCTTTTTGTACAATTAACGTTTTGTTAATTTGCT
AATAAATATGTCATTGGTATCGTCTAGATTGCTGTACCGTGAGTCATGTA
TTTTTCATATCAATAAAATTCTCAGTATAATTTAGCAATATTTTTTACAT
ATTACCTTTGTCTCAGAGCAAAGACTTAGATATATCATATAACTATAATT
AATGTGCATTCAATATTATAATTTACAATTGCATTTTTGAGTAATTTTAT
ATGTTTTCTATAGAAATCATCTGTTGAGTCCTATTTTATATTAATATTTC
TCATTGGATCAACTTAAAAGATTGTGAATATCCTTTGTAGGTCCGAATTA
TGTTTCAATATTTGGCTATAGTTCTAGGACATTTATTGTTAAATAATAAT
TGATTTTCTTATAAATATTTTTGTAGAAACATGATGGAATCATGAATTTT
TACTACTAATCTATGAATTTGATTTCAGGCCCTCTCTTGTACATGTAGCA
AGCATTTTCATCTATACTGTCTTGGGAATGCGGCACCAAAGGGTCAAAAT
CTGGGAGAATTAACTGAAATATCATGTCCAAAATGTAAACATCCAATTCC
CTTGACTCACTCTCTTCCAACACAGAGTCAACGACGAAAAAGAAGTAACT
CCGATGAATAGAAACATTTCGGCTCCCTGATGTTATTAATATACATTCAT
TTATCAATAATTATAATTTATTGAAAGGTTTTTGGTGTTTTTTTACGTTC
TTTATTATTGAAAGAGAGGGGTATACATAGGTATATAAGTTCAAAAGAGG
AGAAGCAGGATAAGTAATGTAGTATATTCACAATAGAGCGGAAAGATGAT
ACATCTATTAAGCATTATTTT

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