EMLSAT00000007593, EMLSAT00000007593-703440 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007593
Unique NameEMLSAT00000007593-703440
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s438supercontigLSalAtl2s438:546940..548109 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007593 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007593EMLSAG00000007593-690359Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000033389EMLSAE00000033389-742317Lepeophtheirus salmonisexon
EMLSAE00000033390EMLSAE00000033390-742318Lepeophtheirus salmonisexon
EMLSAE00000033391EMLSAE00000033391-742319Lepeophtheirus salmonisexon
EMLSAE00000033392EMLSAE00000033392-742320Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778520auto778520Lepeophtheirus salmonispolypeptide
EMLSAP00000007593EMLSAP00000007593Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007593

>EMLSAP00000007593 ID=EMLSAP00000007593|Name=EMLSAP00000007593|organism=Lepeophtheirus salmonis|type=polypeptide|length=186bp
MDLQGLQFDFKIYVDVLEFSLGTKSDECFPAHPEEYIHIKTYQELLQKLK
KINLLSETSKVRAYSDKTIKKSLQLRLSCGTSGHQILISHGYPLPSNWTL
QRNLKHIDFQPGILHTVMNLLQLKTQTMEDSNKYCGIVMDEMSIKSTLEY
DAGDQLVRGYDTVKPSSDELATHVLVFALVGVKTRC
back to top

mRNA from alignment at LSalAtl2s438:546940..548109-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007593-703440 ID=EMLSAT00000007593-703440|Name=EMLSAT00000007593|organism=Lepeophtheirus salmonis|type=mRNA|length=1170bp|location=Sequence derived from alignment at LSalAtl2s438:546940..548109- (Lepeophtheirus salmonis)
ATGGATCTCCAAGGACTTCAGTTCGATTTTGTATTTTTTGAGTGACCCCA
TTTTTTAGGGGGGTGAACTGACAAATCGAAAAAATTATCTTAATATTGTT
TACTATTTCAATGTCCTCATAATGACGTCAAACCTGTAATAATAGTATAA
ATATCATAACATAATACCACGCTTCTCACAAATTCAAATAAAATAATTAT
TAGTTACTAATTAGGTATATTTTGAACATTAAAATTCTCTACTCATCATG
AATGGATCTCTTCTCTCAAGTCATAAGTCATAGCTGACTCTGTACGACTC
ATACCTTTTCAGCCTTTTTTGGTCATTTTGAACTTACTAAGTAGCAGAGC
ACTCAGAGCCTGCAGCAGATAATAACAAATGCTATCTTCTCTCTCTAGAA
AATTTATGTGGATGTATTGGAATTTTCTTTGGGTACAAAATCTGATGAAT
GTTTTCCAGCACATCCTGAGGAATATATTCATATTAAAACATATCAAGGT
AAGATTATATATTTCTTGACTACGTTATCTATTATGCTATTGGTAATGAT
TATTTTGTTTCATCTATTATAGAGCTTTTGCAAAAATTGAAAAAGGTAAA
AGACATGAATTGCTCTCGTTAAATTCAACTAGAAGTTGGAAAGGAGATAT
GATTGTTGAGCTGAAGAAAAAAATTCATCAAAGAGGGACTAGGGTCCGTA
AATGCGAAGAGAAATATGTATATCTGAAAAATTCCCTCATAAATATTTAA
AACTGAGACCAGATAAATCTATTGAGTGAGACCTCAAAAGTGAGGGCATA
TTCAGATAAGACGATTAAGAAATCTCTCCAATTGAGGCTATCCTGTGGGA
CAAGTGGCCATCAAATATTAATTAGTCATGGGTATCCACTTCCAAGCAAT
TGGACTCTACAGCGAAATCTGAAGCACATCGATTTTCAACCAGGAATCCT
CCATACTGTAATGAACTTGCTCCAACTGAAGACCCAAACCATGGAAGATA
GCAACAAGTATTGTGGTATTGTGATGGACGAAATGTCGATTAAATCAACT
CTCGAATATGATGCTGGTGACCAATTAGTAAGAGGTTACGATACCGTTAA
GCCGTCAAGTGATGAGTTGGCCACACATGTTCTAGTATTTGCATTAGTTG
GAGTCAAAACTCGTTGTTAG
back to top
Add to Basket