EMLSAT00000007729, EMLSAT00000007729-703576 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000007729
Unique Name	EMLSAT00000007729-703576
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s44	supercontig	LSalAtl2s44:635264..638187 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000007729 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000007729	EMLSAG00000007729-690495	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000034096	EMLSAE00000034096-743024	Lepeophtheirus salmonis	exon
EMLSAE00000034097	EMLSAE00000034097-743025	Lepeophtheirus salmonis	exon
EMLSAE00000034098	EMLSAE00000034098-743026	Lepeophtheirus salmonis	exon
EMLSAE00000034099	EMLSAE00000034099-743027	Lepeophtheirus salmonis	exon
EMLSAE00000034100	EMLSAE00000034100-743028	Lepeophtheirus salmonis	exon
EMLSAE00000034101	EMLSAE00000034101-743029	Lepeophtheirus salmonis	exon
EMLSAE00000034102	EMLSAE00000034102-743030	Lepeophtheirus salmonis	exon
EMLSAE00000034103	EMLSAE00000034103-743031	Lepeophtheirus salmonis	exon
EMLSAE00000034104	EMLSAE00000034104-743032	Lepeophtheirus salmonis	exon
EMLSAE00000034105	EMLSAE00000034105-743033	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto779029	auto779029	Lepeophtheirus salmonis	polypeptide
EMLSAP00000007729	EMLSAP00000007729	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s44:635264..638187-

protein sequence of EMLSAP00000007729

>EMLSAP00000007729 ID=EMLSAP00000007729|Name=EMLSAP00000007729|organism=Lepeophtheirus salmonis|type=polypeptide|length=387bp
MNLMVKNHSPVGRVQEIIKSSSHGEAHPFLLFVLDSWNEGSFISQLCPTT
DGRNCLFPFKYLGIEYKACTTADYGTTAWCATSVDSTTGETKEYGDCASS
CKEVSTASTSGCKSTSGVACKFPFGYNGEIFKQCTNIXFGDTFWCAVSVN
GNGDVQGYGTCSADCPRYSTIPADKCATISGVSCTFPFKYNGKTYDACTT
ADNSGSPWCATSVNAQGEYQGYGNCNTNCQVSSCPTTNGKKCTFPFSWEG
VNFDGCTDASNNGVQWCAVTTGFPDNYVIEYGDCSSSCPVKDFGGIFWCA
TSVDAAGNNLGYGTCSSSCPREATIPSNKCGTTDNNACIFPFTYSGKTYT
TCTTRDNSGTPWCATKVDVNAYYVDYGTCNSICNVVN

mRNA from alignment at LSalAtl2s44:635264..638187-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000007729-703576 ID=EMLSAT00000007729-703576|Name=EMLSAT00000007729|organism=Lepeophtheirus salmonis|type=mRNA|length=2924bp|location=Sequence derived from alignment at LSalAtl2s44:635264..638187- (Lepeophtheirus salmonis)
ATGAATTTGATGGTTAAAAATCATTCACCAGTTGGAAGAGTACAAGAAAT
CATCAAATCCTCTAGTCATGGAGAAGCACATCCTTTTTTACTCTTTGTCC
TTGATTCTTGGAATGAAGGCTCTTTCATCAGTAGGTAAAAGTTCTTCAGT
CTTTCAAAGCTTCAAAATCTTTTTAATATTATTTTATAGGTCAATTATGT
CCTACCACTGATGGACGGAACTGTTTATTTCCATTCAAATATCTTGGTAT
AGAATATAAAGCGTGTACAACTGCCGATTATGGAACCACGGCATGGTGTG
CCACATCTGTAGACTCGACAACTGGTGAAACTAAAGAATACGGGGATTGT
GCGTCGTCCTGCAAAGGTATGTAATATTAACTTATTTATTCGTGAGTTTT
GAGAAAAAGTAGAACTATTTCTATTCTTTAGAGGTATCAACTGCGTCCAC
TAGTGGATGCAAATCAACAAGCGGGGTTGCCTGTAAATTTCCATTTGGTT
ACAATGGGGAAATATTCAAGCAATGTACAAATATTGKTTTTGGAGATACC
TTTTGGTGTGCCGTGTCAGTGAATGGAAACGGTGATGTACAAGGTTATGG
AACATGCTCTGCTGATTGCCCAAGTGAGTACTTAGAACCGTATAAAGTAC
TAAGTTTCTAAATTCACAACTGGTTTTTTAATTCTTTTTTATAGGATATT
CAACAATTCCTGCGGATAGTAAGTAATTTCTTTTTAAAAGGAATAATTAC
TAATGATTATATTTTAGAATGTGCAACTATAAGTGGAGTGTCCTGTACTT
TCCCCTTTAAATATAACGGTAAAACATATGACGCTTGTACCACAGCAGAC
AACTCCGGATCTCCATGGTGTGCAACATCAGTCAATGCCCAAGGAGAATA
TCAAGGTTATGGAAACTGTAACACAAATTGCCAAGGTAAGAGATCATTTA
AAAATGTAATTGAGATTGAGTAAATCTTATTACTTCCAAGAAAACTATCA
AATTTTGAATCTTTGAAATCGGAATTTGAAATATTTATTTCTTCATTGTA
GATGTTTATTATATATTTAGTTACATATATAGCTTAAAATGAGGTAGAAT
TAGCCATGATAATAAGTATGAGAGATTTCAATAAATTACTATGTAAATTC
AATTTTGGTTGATAATCTATATTTAAGAGAATTGGGAACTTAAACTCGTT
CTTTTTGAATTTTATTTACACTTAATATAAGTGTTCTGTAAGAACTTTTT
TATTTTGATTCGTTCCAGTTCAGTCTTAGGATCGGTCCTGTAAGTCCTTG
GGAGCAGTCCTTAAGACTGTCAGTCCTAGCACTATCACTGAAATAAAGTT
GAACGACGTCATCATAGACCGAACCTTATAAGTTTTAGGACGGAACTGGA
CCAGACCGAGACTGAACTAGACGGACTGAAGTCTTCAGTCCTAAATAAGG
ATCGACACAACACTACTTAATATCTAATTATATTTCTTTTTAGTGAATGA
TAATCCAACCCCTCCACCATCCACCACCACAACTACAAACAATACAACAA
CAACACCAACCAATACTACAACAATGACAAGTACAACAATGCAGACCAAT
ATTACAACAACGCCGACCAATAATACAATAGCCACAAGTACAGTATTGCC
GACCAATACTACAACAATGCCGACCAATACTACAACAATGACGACCAATA
CTACAATAATGACAAGTACAACATTGCTGACCAATACTACAACAATGACA
AGTACAAGAARCCCAACCAATACTACAACAATGACAATTACAACAACGCC
GACCAATACTACAACAATGACAAGTACAACATTACTGACCAATACGACAA
CAACGACAATTACAACAACGCCGATCAATACTACAACAATGTCGACCAAT
ACTACAACTACTTCAAATCCAAATACCAAAGCTCAAGGCGGTAAAGGASC
AGCAACTACAACAACAKCCKCCKCCACCACTACTACTATNNNNNNNAACA
ACCCCAACCCCAAAAGGTAATGGCAGTTTGTGTGCTTTCAATCTTTCTCT
TGAAAGCCATTAATCAACGGTTTGAAATATGATTTTCTTCCTAGTTTCTT
CTTGCCCTACAACTAATGGAAAAAAGTGCACCTTTCCATTTTCCTGGGAG
GGCGTCAATTTTGATGGCTGTACAGATGCTTCCAACAATGGTGTACAATG
GTGTGCCGTAACCACTGGTTTTCCAGATAATTATGTAATAGAATACGGGG
ATTGCTCTTCTTCTTGTCCAGGTAGTCTTCTGTAGTGTATTCTCCTGATT
AATCCAAACTAATTGGAATTTTATATTAAGTTNAATGCAACGGCTTCAAA
TAGTGGATGSMTTTRAACACAAYGAKRAKCCRGCKTTTTRCCKTTCKAAW
ATAAAYGMGMAANTTATAACCAATGTTCAGTTAAAGATTTTGGAGGTATT
TTTTGGTGTGCCACATCAGTTGATGCAGCTGGAAACAACCTAGGCTATGG
TACATGCAGCAGCTCATGCCCTAGTAAGTGATTCAAATTTTTTTTGTTTA
AATTAAAGTCCTTTATTTAACATCACAATTATTTTGATTTCAGGGGAAGC
AACAATTCCATCCAACAGTAAGATTCAGTTTAAATCCATTTGATTACATT
AAAAGGGACTCAATTTATCGTTTGTTTCTTCCAGAATGTGGCACAACCGA
CAATAATGCCTGTATATTCCCATTCACTTATAGTGGAAAAACTTACACAA
CATGTACCACAAGAGATAACAGTGGAACTCCTTGGTGTGCAACAAAAGTT
GATGTAAATGCCTATTATGTTGATTATGGAACATGTAACTCAATTTGTAA
TGGTAATTGTATACAAAAATATTTATTCCACTGATTTTACACGATTTTTT
ATTTATTTTCCAGTTGTGAATTAG

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