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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000562 | Fibronectin, type II, collagen-binding | SMART | SM00059 | FN2 | coord: 235..284
e-value: 1.2E-4
score: 19.9
coord: 113..161
e-value: 0.004
score: 7.5
coord: 48..97
e-value: 0.0016
score: 10.7
coord: 177..225
e-value: 6.2E-7
score: 38.5
coord: 331..379
e-value: 6.8E-5
score: 21.9 |
| IPR000562 | Fibronectin, type II, collagen-binding | GENE3D | 2.10.10.10 | | coord: 183..225
e-value: 1.1E-12
score: 47.1 |
| IPR000562 | Fibronectin, type II, collagen-binding | PFAM | PF00040 | fn2 | coord: 242..275
e-value: 1.7E-7
score: 31.0
coord: 338..370
e-value: 2.5E-10
score: 40.0
coord: 184..225
e-value: 2.0E-11
score: 43.5
coord: 55..97
e-value: 7.6E-8
score: 32.1
coord: 120..161
e-value: 4.3E-6
score: 26.5 |
| IPR000562 | Fibronectin, type II, collagen-binding | GENE3D | 2.10.10.10 | | coord: 101..163
e-value: 5.7E-9
score: 35.2 |
| IPR000562 | Fibronectin, type II, collagen-binding | GENE3D | 2.10.10.10 | | coord: 329..379
e-value: 1.1E-12
score: 47.0
coord: 233..284
e-value: 7.3E-8
score: 31.6
coord: 45..98
e-value: 3.1E-10
score: 39.2 |
| IPR000562 | Fibronectin, type II, collagen-binding | PROSITE | PS51092 | FN2_2 | coord: 179..227
score: 14.25 |
| IPR000562 | Fibronectin, type II, collagen-binding | PROSITE | PS51092 | FN2_2 | coord: 333..381
score: 14.184 |
| IPR000562 | Fibronectin, type II, collagen-binding | PROSITE | PS51092 | FN2_2 | coord: 50..99
score: 12.854 |
| IPR000562 | Fibronectin, type II, collagen-binding | PROSITE | PS51092 | FN2_2 | coord: 115..163
score: 12.699 |
| IPR000562 | Fibronectin, type II, collagen-binding | PROSITE | PS51092 | FN2_2 | coord: 237..286
score: 13.364 |
| IPR013806 | Kringle-like fold | SUPERFAMILY | 57440 | Kringle-like | coord: 45..97 |
| IPR013806 | Kringle-like fold | SUPERFAMILY | 57440 | Kringle-like | coord: 112..161 |
| IPR013806 | Kringle-like fold | SUPERFAMILY | 57440 | Kringle-like | coord: 329..371 |
| IPR013806 | Kringle-like fold | SUPERFAMILY | 57440 | Kringle-like | coord: 176..226 |
| IPR013806 | Kringle-like fold | SUPERFAMILY | 57440 | Kringle-like | coord: 233..277 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000007729 ID=EMLSAP00000007729|Name=EMLSAP00000007729|organism=Lepeophtheirus salmonis|type=polypeptide|length=387bp
MNLMVKNHSPVGRVQEIIKSSSHGEAHPFLLFVLDSWNEGSFISQLCPTT
DGRNCLFPFKYLGIEYKACTTADYGTTAWCATSVDSTTGETKEYGDCASS
CKEVSTASTSGCKSTSGVACKFPFGYNGEIFKQCTNIXFGDTFWCAVSVN
GNGDVQGYGTCSADCPRYSTIPADKCATISGVSCTFPFKYNGKTYDACTT
ADNSGSPWCATSVNAQGEYQGYGNCNTNCQVSSCPTTNGKKCTFPFSWEG
VNFDGCTDASNNGVQWCAVTTGFPDNYVIEYGDCSSSCPVKDFGGIFWCA
TSVDAAGNNLGYGTCSSSCPREATIPSNKCGTTDNNACIFPFTYSGKTYT
TCTTRDNSGTPWCATKVDVNAYYVDYGTCNSICNVVN back to top
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