EMLSAT00000007746, EMLSAT00000007746-703593 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007746
Unique NameEMLSAT00000007746-703593
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s450supercontigLSalAtl2s450:381923..383529 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007746 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007746EMLSAG00000007746-690512Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000034194EMLSAE00000034194-743122Lepeophtheirus salmonisexon
EMLSAE00000034195EMLSAE00000034195-743123Lepeophtheirus salmonisexon
EMLSAE00000034196EMLSAE00000034196-743124Lepeophtheirus salmonisexon
EMLSAE00000034197EMLSAE00000034197-743125Lepeophtheirus salmonisexon
EMLSAE00000034198EMLSAE00000034198-743126Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777087auto777087Lepeophtheirus salmonispolypeptide
EMLSAP00000007746EMLSAP00000007746Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007746

>EMLSAP00000007746 ID=EMLSAP00000007746|Name=EMLSAP00000007746|organism=Lepeophtheirus salmonis|type=polypeptide|length=304bp
MSKATLYLVLLLFALVALSSVSAQRRNYPEGKGYRRGETAIFKNRKGPGN
NGRFFDPRKPRPFKPQKKRKLFKPFLDRQFRLPNNNKQTKQEYDLIPPPP
PPPPTQRVEPSQVFNSEKNQEEIRIIEELNRPRRQPNTPVEINTEQRINP
VIRNIPEETEYQPSSSSNXIREVAQNRDSYYIPSSPSVPYEENNYAPPEQ
RDLESAVFGQADNYQAKNEKAEVFQTEDRLEFQIHGHEGPDSYRYGYDTG
NGYNRQFRYEEKDKNGLVNGRYGXFXPYGKLHVVNYISHPEHGYKASGDG
VPTF
back to top

mRNA from alignment at LSalAtl2s450:381923..383529-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007746-703593 ID=EMLSAT00000007746-703593|Name=EMLSAT00000007746|organism=Lepeophtheirus salmonis|type=mRNA|length=1607bp|location=Sequence derived from alignment at LSalAtl2s450:381923..383529- (Lepeophtheirus salmonis)
ATGTCAAAAGTAAGTTAACAAAAAGGATGATGCTTGAGACTTCACGTCTG ATTTGCTCATTTATATATTAGGCCACCCTTTATCTCGTGCTTCTTCTCTT CGCCCTTGTGGCCCTGTCTTCAGTGTCAGCTCAACGACGGAATTACCCTG AAGGAAAAGGATATCGCCGAGGAGAGACAGCCATTTTTAAGAATCGAAAA GGACCCGGAGTAAGACATTATTATTCTCCTTTAGCAGACATTTTGTCATT CATTTCTTTTACAGAACAATGGGCGCTTCTTTGATCCTCGGAAGCCAAGG CCATTCAAGCCTCAGAAAAAGAGGAAACTATTCAAAGTAAGTTGAATGGC GTTTGTAGTTACAAATGCTCATACGTTCATCCTTACGTCATAATTGCATA TATTATTAGTTATTTTTTCATGTTGAATCTGATATTATTAGTGTAGTGAA ATCTAAAAGTAATTTCCGACTAATCAAAAGTATGTCATGTAAAAACATAC ATGAATAAGGATGAAAAGATAATGAAAGAAACAGAAAAAAACAAAAACAT GACGAGTGTAATTCACAAAGATAATTTGTGGCGAAATAAGTTTTGCGTCA CATATGGAGCAATTTCTAAATATTATCAATGCTATTCACATATACAATGT AATTACATATTTACCATAGAGATTTATTCCTTTATTCCAGCCTTTTTTGG ATAGACAATTCCGTCTTCCGAACAATAACAAGCAAACGAAACAAGAGTAT GATTTGATCCCTCCTCCACCTCCACCCCCACCCACACAAAGAGTAGAGCC TAGCCAAGTCTTTAATAGTGAGAAAAATCAAGAAGAAATTCGTATCATAG AAGAACTAAACCGYCCTCGCCGTCAACCAAACACTCCTGTCGAAATCAAC ACGGAACAAAGGATCAATCCCGTCATTCGTAACATCCCTGAAGAAACAGA GTATCAACCTAGCTCTTCTTCAAATMCCATCCGTGAAGTTGCTCAAAACC GTGATAGCTATTACATTCCTTCAAGCCCCTCCGTACCCTATGAAGAAAAT AATTATGCTCCACCTGAGCAGAGAGATTTGGAGAGTGCTGTTTTTGGACA GGCGGATAACTATCAGGCTAAAAATGAGGTAAGGCATAATTATATATATA AAAATCCCACTCTGTTTTGAATTAGAAATCAATTATGCCATATGGCGTTT ATTTCTAATAAAGTAGCCAGGGACGACTCCTGTTTTAAATACTTTAATAG ATACACGTTTCTCTATTGGAAGGATAAATAAATTGATTTCATCATCATAT ACAATTAAGGAATTGATAATATTTATAATATGTATTTAATCTATTACAGA AAGCCGAAGTCTTTCAAACAGAAGATCGCCTTGAATTCCAAATACATGGA CATGAAGGTCCGGATTCCTACAGATACGGCTATGACACAGGGAATGGCTA TAATAGACAATTCCGCTATGAAGAAAAGGATAAGAATGGTCTTGTAAATG GACGGTATGGTTAMTTTNACCCTTATGGTAAACTTCATGTCGTCAATTAC ATTTCTCACCCAGAGCATGGATATAAAGCCTCAGGGGACGGTGTTCCAAC TTTTTAA
back to top
Add to Basket