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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s458 | supercontig | LSalAtl2s458:275696..281940 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000007817 >EMLSAP00000007817 ID=EMLSAP00000007817|Name=EMLSAP00000007817|organism=Lepeophtheirus salmonis|type=polypeptide|length=1886bp
MTGLTTSDTDPNFAVILEFLHRFGKXIFGESWKLRISPLEEGLESCSGPP
SPFLVDLIVKLLRKVHKSISADRWEKSLIRYLSGRXEDAKAEMLDSGFAS
LSPEVKIRILRSLCESQFEFNVKFKNSLSHKKDLRSSPLGQDKRGXLYWY
FEDEEGTLRIYKEDLDEETWELVAKDKASFILLLDKLKNNGLSTKEPSPS
TLDDEASLQDGLENIILDTRPVPNSIEHSNATSVANSDLEEDTSPLNPSS
PSEDKSTDRNTSNKVVMRTEDNEKKSIHEKCRGPLQDHKPAVDNRLEVSK
NTNEKNYSLSTSPIQQRTTSSIPKMIIKRNESHSSSSSSYKISSDHSKNV
VASSEKXAITKVNTDDVVLHKQSIQKSISSSLTLNKVKNIPEPKPSFNIE
STLSNASDTKVKVKSEEKLFTPYSLEKEHSSKSVSVSKLDTKEDTMLHMG
PLSALPQEKMPDRKILVTNKTVDVIDAKKRVEIIDDKLSDDTKSHIGVNE
PLHSKKVSDLHDKKSLDHKTTINVKQPINNDKVSDTHSKKSSDNQSTLKI
NNQPINPEKVSDSHKSSIKFGKVSDSHSEKSPDDKPTMKANEPVKFGKVG
NLNSKKLPDHKSVMIVKETNTSKKVINTHDSKPTDQKKVVKVNDPIKSEK
VTGLHAKKLPDPVSTKKVNEPLRAEKVIDLQAKKSPDPVSTKKVNEPIRA
EKVKDIHAKKSPGPASTTKVDDPIRSEKVSNLHAKKSPDPVSTTKVNDPI
RSERVSDLHAKKLPDSVSTKKVNDPTRSEKVSDLQAKKFPDSVSTKKVND
PISSGKVSDSIIKKSPDHHISTKKVNDPIRSEKVSDSHSKKSDDQKSTLK
GNESIMSEKVFDLYDKKSLDHKSIVNEAVRSGKVSDLHSEVLPDHKPAVK
VKQPINVEKVIDPLIYKSPDHKXARKVNEPIISEKGSDSHSNKSPIHKST
MKVIEPMKSDKVSDSDAKKSIDQKSTTKLNEPIRSEKVNYESTKKVIGPV
KSETFSDSHVKKSQDPASTKKVHDPIKFGKVIVSHSEKLVDQTPIIKVNE
PITSGKIRDSHSVKSSDHKSTIEVNDPIKSREICDSHDRKSTDHESTKKV
TDSVKSVKDSDSVASKSSDLKSSIQVNDPILSENVTDSHAIKSPDLRSKI
KVNDPILQRDSSIKKLLDPNTPPKEENSTKLNTTSKLVSGEKNLCVDSDT
GSASSGNKLLDHRSQMKETESIKLDFKIDKKGSEVVEDKSASTHKKSNII
VHDNKALQCEVTSKSTSNIEKDSLTFVASGIERDVSKDQKVHEKKKEGQF
CPPLEIHHPITKSKDTIKSVDSFAIPDNLKTKLVVNTSKEYLIEVNKNKS
LRDKGSQLHLKDNFLSSKSPDTYSSEDQSDESKTDDTNKTDLSKNQSSSQ
ESITKEKGISSSSISMDSIPSSNVPKEKLDLSNLSPSSDIQSKNVLKEVD
SINTSKIKDDIALKEPISANISSVRKDSPGVVSVTDLIGNIKATSSKMSS
SSSLFEAKDLASNKQSDSPSPFESDHKNTLVPLSNKDDDFSSTTTTINKK
DSIEKSATSPDLIVEKNPTKKETEANVVSVSEKSELEQSDQQSCDSVSAH
WIKTKSDGITSEKNKSLKSANLITPSGSTNPGNKNNDGTSSSNVEKKELD
SSNQSYIPTKEEVEKTLAIEPECQNEPTEKVPDVTTDDSSKSEISKELDK
SESVPSPPKYMPLKKRGLTESPTEFLDGAKKSKVDNDSPLVVEEAVEEPI
MIIKGEGEGALNDARNNGRINGGKVGEQNKEDSVKTSPAAGNEEDDNKIP
IKKSKSRSNNNNVVKKRQESSPPPPLRQSRRSSGRIASLRIKEAERRQRE
EEEALLEFKAHQKKKNNRSLETRFKEEEEETASARI back to topmRNA from alignment at LSalAtl2s458:275696..281940+ Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000007817-703664 ID=EMLSAT00000007817-703664|Name=EMLSAT00000007817|organism=Lepeophtheirus salmonis|type=mRNA|length=6245bp|location=Sequence derived from alignment at LSalAtl2s458:275696..281940+ (Lepeophtheirus salmonis)
ATGACGGGACTCACTACTTCGGACACGGATCCGAACTTTGCGGTAATTCT
GGAATTTCTGCATCGGTTTGGKAAGGAKATATTCGGAGAGAGTTGGAAAT
TACGGATCAGCCCTTTGGAGGAGGGCCTGGAGTCCTGTTCGGGGCCGCCG
TCCCCATTCCTTGTGGATCTGATTGTGAAGCTTCTCCGCAAAGTACACAA
GTCCATTTCTGCGGATCGGTGGGAGAAATCCTTGATTCGGTACTTGAGTG
GAAGGGRAGAGGATGCCAAAGCAGAAATGCTGGACTCTGGGTTCGCATCC
CTGAGTCCAGAGGTTAAAATACGGATTCTAAGATCTCTCTGTGAATCCCA
ATTCGAATTTAATGTGAAATTTAAGAACTCCCTCTCGCATAAGAAGGATC
TGCGATCCTCCCCCTTGGGGCAGGATAAGCGGGGGGRTCTCTATTGGTAC
TTTGAAGATGAAGAAGGAACTCTCCGCATCTACAAGGAAGACCTGGACGA
AGAAACATGGGAACTCGTTGCTAAAGACAAAGCCTCCTTTATTCTTCTCC
TCGATAAACTTAAGAATAATGGTCTTAGTACAAAAGAGCCCTCGCCATCC
ACTTTGGATGACGAAGCCTCTCTGCAGGACGGACTTGAAAATATTATTCT
TGATACTAGACCCGTTCCGAATTCAATTGAACACTCTAACGCTACCAGTG
TTGCTAATAGTGACTTAGAGGAGGATACTTCACCTCTCAACCCTTCTTCA
CCTTCAGAAGATAAATCCACAGATAGAAATACCTCTAATAAAGTTGTTAT
GAGAACTGAAGATAATGAAAAAAAGTCCATCCATGAAAAATGTCGTGGTC
CATTGCAAGATCACAAACCTGCTGTTGATAATCGATTAGAAGTATCTAAA
AACACAAATGAAAAAAATTATTCACTGTCTACGAGTCCTATTCAACAGAG
AACGACCTCCTCCATACCGAAAATGATTATTAAAAGGAATGAATCCCATT
CGTCCTCATCGTCTTCTTATAAAATATCTTCAGATCATTCGAAAAATGTA
GTTGCATCAAGTGAAAAGTMTGCTATAACCAAAGTTAATACGGACGACGT
CGTTTTGCATAAGCAATCTATACAAAAAAGTATCTCCTCATCTCTTACTC
TCAATAAAGTAAAGAATATACCAGAGCCAAAACCTTCTTTTAATATAGAA
TCCACTTTATCTAATGCTTCTGATACTAAAGTCAAAGTTAAATCAGAAGA
AAAATTGTTTACTCCCTATTCTTTGGAAAAAGAACATTCCTCTAAATCCG
TATCAGTATCGAAATTAGATACAAAGGAAGATACTATGCTGCATATGGGT
CCTCTAAGTGCTCTGCCTCAGGAAAAAATGCCTGATCGTAAGATTTTAGT
TACAAACAAGACAGTCGATGTTATTGATGCTAAAAAAAGAGTTGAAATAA
TTGATGATAAGCTTTCTGATGATACCAAGTCTCATATAGGTGTGAATGAG
CCACTCCATTCCAAAAAAGTAAGTGATTTGCATGACAAAAAGTCACTAGA
TCATAAAACTACTATAAACGTCAAACAACCCATCAATAATGATAAAGTGA
GTGATACGCATTCAAAAAAGTCGTCAGATAACCAATCGACTTTGAAAATC
AATAATCAACCAATCAATCCTGAAAAAGTTAGTGATTCGCACAAATCTAG
CATCAAATTTGGGAAAGTTAGTGATTCGCATTCTGAAAAGTCACCTGATG
ATAAACCAACTATGAAAGCGAATGAACCTGTCAAGTTTGGAAAAGTTGGT
AATTTGAATTCTAAAAAGTTGCCTGATCATAAATCTGTAATGATAGTGAA
GGAGACTAACACTTCCAAGAAAGTTATTAATACACACGATTCAAAGCCAA
CAGATCAAAAAAAAGTTGTCAAAGTTAATGATCCTATCAAGTTTGGAAAA
GTTCATGATTCGCATTTTGAAAAGTTGCCAGATCATAAATCTACAANTTA
AGGTTAATGATCCCATCGGCTCCGAAAAARWTAGTGATTCAYAWWCTRWA
AAATCACCAGATCATCATATATCTACTAAGAAGGATACTATCAGATCGGA
AAAAGTTACTGGTTTACATGCTAAAAAGTTGCCAGATCCTGTATCTACTA
AGAAAGTAAATGAACCTTTAAGGGCTGAAAAAGTTATTGATTTACAAGCT
AAAAAGTCGCCCGATCCCGTATCTACTAAGAAAGTAAATGAACCCATAAG
AGCTGAAAAAGTTAAGGATATACACGCTAAAAAGTCGCCAGGTCCTGCAT
CTACTACGAAAGTTGATGATCCTATTAGATCGGAAAAAGTTAGTAATTTA
CACGCTAAAAAGTCGCCAGATCCTGTATCTACTACGAAAGTTAATGATCC
CATCAGATCGGAAAGAGTTAGTGATTTACATGCTAAAAAGTTGCCAGATT
CCGTATCTACTAAAAAAGTTAATGATCCTACCAGATCGGAAAAAGTTAGT
GATTTACAGGCTAAAAAGTTCCCAGACTCCGTATCTACTAAGAAAGTTAA
CGATCCCATCAGCTCGGGAAAAGTTAGTGATTCAATTATTAAAAAATCAC
CAGATCATCATATATCTACTAAGAAAGTGAATGACCCTATCAGATCTGAG
AAAGTAAGTGATTCACATTCTAAAAAATCAGATGATCAAAAATCTACTCT
GAAAGGAAATGAGTCTATCATGTCTGAAAAAGTGTTTGATTTATACGATA
AGAAGTCGCTAGATCATAAATCTATTGTAAATGAGGCTGTCAGATCAGGA
AAAGTTAGTGATTTGCATTCTGAAGTGTTGCCAGATCATAAACCTGCTGT
AAAAGTGAAACAGCCCATTAATGTGGAAAAAGTTATTGATCCACTTATTT
ATAAATCACCAGATCACAAAYCCGCCAGGAAAGTCAACGAGCCCATTATT
TCCGAAAAAGGTAGTGATTCGCATTCTAATAAGTCGCCAATTCATAAATC
TACAATGAAAGTAATTGAGCCCATGAAATCTGATAAAGTTAGTGATTCAG
ATGCTAAAAAGTCAATAGATCAAAAATCTACCACGAAATTGAATGAACCT
ATCAGATCTGAAAAAGTTAGTGATTCWCATTCTRTAAAATCRCCAGAACG
CGAATCTACTAGGAAAATAATTGGGCCCATTAAACCTGAAAAAGTTAGTG
ATTCACATTCTRTAAAATCGCCAGAAYGCGAATCTACAAAKAAAATAATT
GGGCCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNGCCAATGAAACCTGAAAAAGTTAGTGATTCAWATTCT
GYAAAATCWCCAGAWYRYGAATCTACAAAGAAARTAATTGGGCCAATGAA
ACCTGAAAAAGTWAGTGATTCACATTCTGTAAAATCGCCAGATTATGAAT
CAACAAAAAAAGTAATTGGACCCGTAAAATCTGAAACATTTAGTGATTCA
CATGTTAAAAAGTCTCAAGATCCCGCATCTACAAAGAAAGTTCATGATCC
AATCAAATTTGGAAAAGTTATTGTTTCGCATTCTGAAAAGTTGGTAGATC
AAACACCTATTATTAAAGTAAATGAGCCCATCACATCTGGAAAAATAAGG
GACTCACATTCTGTTAAATCATCTGATCATAAATCTACTATTGAAGTTAA
TGATCCTATAAAGTCTCGAGAAATTTGTGATTCACACGATAGAAAGTCAA
CAGATCACGAATCTACGAAGAAAGTTACAGATTCCGTTAAATCTGTAAAA
GATAGTGATTCAGTCGCTAGTAAGTCGTCAGATCTTAAATCTTCAATCCA
GGTGAACGATCCGATCCTTTCTGAAAATGTTACTGACTCACACGCTATAA
AGTCTCCAGATCTTAGATCTAAAATCAAAGTCAATGATCCAATCCTTCAA
CGGGATTCTTCAATCAAAAAATTGCTTGACCCTAATACTCCACCGAAGGA
GGAAAATAGTACCAAATTGAACACTACTTCTAAATTAGTAAGTGGCGAGA
AAAACTTATGCGTGGACTCTGATACAGGTAGTGCTTCATCTGGAAATAAG
CTCCTTGATCACAGATCTCAGATGAAAGAGACTGAATCAATCAAATTGGA
TTTTAAAATTGATAAGAAAGGTTCTGAGGTTGTTGAGGATAAATCGGCTT
CAACTCATAAAAAATCAAATATAATTGTGCATGATAATAAGGCGTTACAA
TGTGAAGTTACGTCAAAAAGTACATCTAATATTGAAAAGGATTCCTTAAC
TTTTGTTGCTTCTGGTATTGAGAGGGATGTCTCCAAGGATCAAAAAGTTC
ATGAAAAGAAGAAAGAAGGTCAATTCTGTCCTCCTTTGGAAATCCATCAC
CCAATTACAAAATCCAAAGATACTATTAAATCTGTGGATTCATTTGCAAT
TCCAGACAATTTAAAAACTAAATTGGTTGTAAATACTAGCAAAGAATATC
TGATTGAAGTTAATAAAAATAAATCCCTTCGCGATAAAGGATCTCAATTG
CATTTGAAGGATAATTTTCTATCTTCAAAAAGTCCAGACACTTATTCTTC
TGAAGATCAGTCCGATGAATCTAAAACAGATGACACAAATAAAACAGATT
TAAGTAAAAATCAATCATCATCTCAAGAGTCAATTACAAAAGAAAAAGGG
ATTAGTAGTAGTTCTATTAGTATGGATTCAATTCCGTCAAGTAATGTTCC
GAAGGAAAAATTGGATTTGTCAAATTTATCTCCATCTTCTGACATACAAT
CGAAAAATGTACTTAAAGAAGTTGATTCAATTAATACCAGTAAAATAAAG
GATGATATTGCACTGAAAGAACCCATTTCAGCTAATATTTCCTCAGTAAG
GAAAGACTCTCCTGGCGTTGTTTCAGTAACTGATCTTATCGGTAATATTA
AAGCAACGTCTTCTAAGATGTCCTCATCATCTTCACTCTTTGAAGCTAAA
GACCTCGCTTCAAATAAACAATCCGATTCTCCAAGTCCGTTTGAAAGTGA
TCATAAAAATACTTTGGTTCCTTTAAGTAATAAAGATGATGATTTTTCAT
CAACGACTACAACTATTAATAAAAAGGATTCAATAGAGAAGTCGGCGACT
TCTCCAGACTTGATAGTCGAAAAAAACCCTACTAAAAAAGAAACTGAGGC
AAATGTTGTTAGTGTATCCGAAAAAAGTGAATTAGAACAGTCGGATCAGC
AAAGTTGTGATTCAGTTTCTGCACACTGGATAAAGACAAAAAGTGATGGT
ATTACTTCAGAAAAAAATAAATCTCTAAAAAGTGCAAACCTCATTACACC
ATCTGGTTCGACGAATCCTGGGAATAAAAATAATGATGGAACTAGTTCGT
CTAATGTTGAAAAAAAAGAATTAGATTCTTCGAATCAAAGTTATATTCCG
ACTAAAGAAGAAGTCGAAAAGACCTTAGCCATTGAGCCAGAATGTCAAAA
TGAACCCACTGAAAAAGTTCCTGATGTTACTACGGATGATTCCTCAAAAT
CTGAAATAAGTAAAGAACTTGACAAGTCAGAATCGGTACCTTCTCCTCCT
AAGTATATGCCTCTCAAGAAGCGTGGTCTTACAGAGTCCCCTACGGAATT
TTTAGATGGAGCTAAAAAATCTAAAGTGGACAACGATTCCCCTCTTGTTG
TAGAAGAAGCTGTAGAAGAGCCCATAATGATTATTAAGGGTGAAGGTGAG
GGTGCTCTTAATGATGCAAGGAATAATGGTAGAATCAATGGGGGAAAAGT
GGGTGAGCAAAATAAGGAGGATTCTGTAAAAACATCTCCGGCTGCTGGTA
ATGAAGAAGATGACAATAAAATTCCAATCAAAAAGAGTAAAAGTCGTTCA
AATAACAATAATGTTGTCAAAAAGCGCCAAGAGTCTTCTCCCCCTCCTCC
ACTTCGACAGTCAAGACGTTCAAGTGGACGCATTGCGAGTCTCCGTATTA
AAGAGGCAGAAAGGAGGCAACGAGAGGAAGAGGAAGCACTTTTAGAGTTT
AAAGCTCATCAAAAGAAAAAAAATAATAGTATAAAGGAAGTCTTGAAACC
AGATTTAAAGAAGAAGAAGAAGAAACAGCCTCAGCAAGAATCTGA back to top
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