EMLSAT00000007842, EMLSAT00000007842-703689 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007842
Unique NameEMLSAT00000007842-703689
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s45supercontigLSalAtl2s45:550782..551391 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007842 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007842EMLSAG00000007842-690608Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000034657EMLSAE00000034657-743585Lepeophtheirus salmonisexon
EMLSAE00000034658EMLSAE00000034658-743586Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778533auto778533Lepeophtheirus salmonispolypeptide
EMLSAP00000007842EMLSAP00000007842Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007842

>EMLSAP00000007842 ID=EMLSAP00000007842|Name=EMLSAP00000007842|organism=Lepeophtheirus salmonis|type=polypeptide|length=132bp
MLPNEVNCTPPAFDNYPNGLFSFDQLLPGSSYPEFFTNVMARDNIGVGTI
LGSALLKIFIIFATIGLVSCQRHHVLQLQFYTITREIIFHGLSILTLFLI
LSDGFVSWVDKLLRTSQYIWRMMYHFKKKHFY
back to top

mRNA from alignment at LSalAtl2s45:550782..551391-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007842-703689 ID=EMLSAT00000007842-703689|Name=EMLSAT00000007842|organism=Lepeophtheirus salmonis|type=mRNA|length=610bp|location=Sequence derived from alignment at LSalAtl2s45:550782..551391- (Lepeophtheirus salmonis)
ATGTTACCAAATGAAGTAAACTGCACTCCTCCTGCCTTTGATAACTATCC
CAATGGACTTTTCTCTTTCGATCAATTACTCCCAGGTGGTTTCCTTGGTT
CGATCGGGCTGACATTTTACTGCGTATCTGGAATAACAATACTCTGTCAT
GAGTATTTTTTCATTGTTTGGAATATGTCTGAACCGAATATAAAATACAG
GCAAATATTGTAAGAGCAACCCTCATGGCAATTAGTAAGGGTTTTTAAAC
AAATTTATACAAATGGGATTCTATAATTTTGTATACACCCATATAGGTAG
TAGCTATCCTGAGTTCTTTACAAATGTGATGGCCCGTGATAATATTGGAG
TTGGAACCATTCTGGGATCTGCATTGTTAAAAATATTTATCATATTCGCA
ACCATTGGTCTAGTGAGTTGTCAAAGACATCATGTTCTTCAGCTTCAATT
TTATACCATCACACGAGAGATTATATTTCATGGATTATCCATCCTTACTT
TATTTTTGATACTAAGTGACGGTTTTGTCAGTTGGGTTGATAAGTTGCTC
AGAACTTCTCAGTATATTTGGCGAATGATGTATCATTTTAAGAAAAAACA
CTTTTACTAA
back to top
Add to Basket