EMLSAT00000007844, EMLSAT00000007844-703691 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000007844
Unique Name	EMLSAT00000007844-703691
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s45	supercontig	LSalAtl2s45:859513..867489 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000007844 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000007844	EMLSAG00000007844-690610	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000034668	EMLSAE00000034668-743596	Lepeophtheirus salmonis	exon
EMLSAE00000034669	EMLSAE00000034669-743597	Lepeophtheirus salmonis	exon
EMLSAE00000034670	EMLSAE00000034670-743598	Lepeophtheirus salmonis	exon
EMLSAE00000034671	EMLSAE00000034671-743599	Lepeophtheirus salmonis	exon
EMLSAE00000034672	EMLSAE00000034672-743600	Lepeophtheirus salmonis	exon
EMLSAE00000034673	EMLSAE00000034673-743601	Lepeophtheirus salmonis	exon
EMLSAE00000034674	EMLSAE00000034674-743602	Lepeophtheirus salmonis	exon
EMLSAE00000034675	EMLSAE00000034675-743603	Lepeophtheirus salmonis	exon
EMLSAE00000034676	EMLSAE00000034676-743604	Lepeophtheirus salmonis	exon
EMLSAE00000034677	EMLSAE00000034677-743605	Lepeophtheirus salmonis	exon
EMLSAE00000034678	EMLSAE00000034678-743606	Lepeophtheirus salmonis	exon
EMLSAE00000034679	EMLSAE00000034679-743607	Lepeophtheirus salmonis	exon
EMLSAE00000034680	EMLSAE00000034680-743608	Lepeophtheirus salmonis	exon
EMLSAE00000034681	EMLSAE00000034681-743609	Lepeophtheirus salmonis	exon
EMLSAE00000034682	EMLSAE00000034682-743610	Lepeophtheirus salmonis	exon
EMLSAE00000034683	EMLSAE00000034683-743611	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto779924	auto779924	Lepeophtheirus salmonis	polypeptide
EMLSAP00000007844	EMLSAP00000007844	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s45:859513..867489+

protein sequence of EMLSAP00000007844

>EMLSAP00000007844 ID=EMLSAP00000007844|Name=EMLSAP00000007844|organism=Lepeophtheirus salmonis|type=polypeptide|length=1452bp
MGFQDIWTSLFLVVVPLLISNSFAMSTKEKMELKLEAKDMFYHGFNAYMD
NAFPADELMPLSCRGRFRGLEPDRGDIDDAMGNFSLTLIDSLDTIFLLGD
LDEFEIGVLKVINTVTFDHDISVSVFETNIRVVGGLISSHILAELVKDKF
YQMKWYQGELLNMALDVGNRLLPAFNSSTGLPHPRVNLRHGIKPGKVRQV
GETCTACAGTMILEFAALSRLSGEFVFEEKASAAMDVLWSARNRMSNLVG
NVLSINTGDWIRRDSGVGAGIDSYYEYVAKAYILLGEDKYLTRWETHYAA
VMKYLSSDSMPGLLQDVHMHRPSSYSKHFLDSLAAFWPGLQVLMGDVKPA
IEAHEILLQIMDRHNFIPEAFTADFQVHWGQYFLRPEFVESTYMLYKATQ
DPHYLEVGKKVLKAIQSHTRTTCGYATIKDVRTLQKEDRMDSFVLAETFK
YLYLLFAEDADLPVEIDDFVFTTEAHLLPLSLARLSNITRVPLPERKSED
MQQSIYDEDVELAWSCPSTVYLFPEKSPKQYASEIREPLANMVTDKCPLR
STLTTRRITGSEFQPTNPDHIKLLLEMGLSVVSLPEGGIQLLHTAGNAKS
PEDAEEGLLFMQEIIEISKTSITDVQPRVVTFYNNEEKRMEKIYAGPAQF
GKELSNGYKAKGKAVVASPYKACGDLENGKEFWGKIGIVERGDCMFIEKA
RLLESLGAVGGIVIDANDGSTSKASPLFGMTGDKGKSDDVSIPLVFLFNE
DAKXLLXAIRNYPDMEVTLQEYIDNGDKKDSSSPIDMNFDFAGPVKSFLE
KSKKQVQKYFSTINKSSSNIQKGQVEEEEDEDEKYFLKHDEPAIDDDVRK
LELEEDSISAEEDEVKSLPDSPHEGDVSVLKDVFRMADDEIRNLIGNSPC
CRSPERFINNILNIPIKYLFGRFYAMTAIHGGKYALSQSLHYIDMGISPT
DGEKSIGKSEEKETLILLASKAFHETLYPCYKDLLTKESEEQIKFSHLLT
PFRTYLISIKGIIDSIRVTSPTLLLSEESSLKMSFVQVDKDSHFSYQNLP
YGIFSTPETPKKRIGVAIGAYVLDVSKLWNRFKGPFMNAEAQKVLGEAET
LNALMGLTPEHWVETRAVIKGLLSSDDPLSIKNERDNYLIPMDKVTMHLP
AQIGDYTDFYSSIDHATNVGTMFRGKENALMPNWKHLPVGYHGRSSSVVV
SGTPIRRPNGQTKPVETEPPQFGPCKLLDFELEMAFFVGGPTNELGKPIS
IEKAQDRIFGMVVMNDWSARDIQKWEYVPLGPFLAKNMGTTISPWVVPIE
AMKPFLTENYPQDPAPLPYLRHNDSFNFDIKLQVSIKPEGASKEDVVTKS
NFKFMYWTMKQQLAHHXATGCNMRPGDLLASGTISGPEESSYGSMLELSW
KGSKTVKLESSGEERKFIKDGDVVNVSGFCQGNGYRVGFGDCWGKVLPAN
PL

mRNA from alignment at LSalAtl2s45:859513..867489+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000007844-703691 ID=EMLSAT00000007844-703691|Name=EMLSAT00000007844|organism=Lepeophtheirus salmonis|type=mRNA|length=7977bp|location=Sequence derived from alignment at LSalAtl2s45:859513..867489+ (Lepeophtheirus salmonis)
CATCAAATCCATAGTGATAATATCCTCAAAATTGTTGTAGCTCCATCATG
ATGGTTAGTGAGTCAAGGGATTTCATGTCACTCTTGGTCTAAAAAGTCAT
TTTGTTGTTGACAAGGTCGTATAGAATCATTACAAAATGGGGTTCCAGGA
TATTTGGACGTCCTTGTTCCTAGTAGTCGTTCCTCTACTCATTTCAAACT
CTTTTGCCATGAGTACAAAAGAAAAAATGGAGCTAAAGTATGTTTTTTCC
CCTGAGTGTCTTTTTATATGATCCTTGATTAATTTGCTGTTATTATTTGA
ATTTACAGATTGGAGGCGAAGGACATGTTTTACCACGGTTTCAACGCCTA
TATGGACAACGCATTCCCTGCAGACGAACTTATGCCTCTGAGTTGTAGGG
GCCGTTTCCGAGGGCTAGAGCCGGATCGGGGAGATATTGATGATGCCATG
GGGAAGTATGTTGAGCAGCTTTGGAGCCCCGTATTCTCATATGTTTAATC
TAATATTGCTTTTATAGTTTTTCTCTCACACTAATTGACTCCCTGGATAC
CATTTTCTTACTCGGGGATTTAGACGAATTTGAAATAGGAGTTTTGAAAG
TGATCAATACCGTTACTTTTGATCATGATATTTCTGTATCTGTTTTTGAA
ACAAATATAAGGGTTGTGGGGTAAGAAATTATAATTATAAATGATATGTA
TAAAATATATCATAATTTGCTTTCATTTTTCAGAGGACTTATTTCATCTC
ATATACTCGCAGAATTAGTCAAGGATAAATTTTATCAAATGAAATGGTAT
CAAGGAGAGCTCTTAAATATGGCTCTTGATGTAGGAAATCGTCTTCTTCC
TGCCTTCAATTCATCAACAGGTCTACCTCATCCTAGAGTCAATTTACGAC
ACGGAATTAAACCTGGTAAAGTCAGACAAGTGGGAGAAACTTGTACAGCA
TGTGCTGGAACCATGATCCTTGAATTTGCTGCTTTGTCACGCCTCTCTGG
TGAATTTGTATTTGAGGAAAAGGTAAGAATGTCATGCAGGAGAGTACTTA
CATCCATTCCAACTATCCATTGTTTAGGCATCTGCTGCAATGGACGTACT
TTGGTCTGCAAGGAATCGTATGTCTAATTTGGTGGGTAATGTTCTTAGTA
TAAATACAGGAGATTGGATCAGACGAGACTCTGGTGTTGGTGCAGGGATT
GATTCCTATTATGAGTATGTTGCTAAAGCATATATCCTTCTTGGGGAAGA
CAAATATTTGACTCGCTGGGAGACTCACTATGCTGCAGTCATGAAATATT
TAAGCTCAGATTCTATGCCTGGATTATTGCAAGACGTTCATATGCATCGG
CCATCATCTTATTCAAAACACTTTTTGGATTCTTTAGCTGCATTCTGGCC
TGGTTTGCAAGTTCTCATGGGGGATGTAAAACCTGCTATTGAGGCCCATG
AAATCCTTCTTCAAATCATGGATCGTCACAATTTTATMCCAGAAGCCTTT
ACTGCCGATTTTCAAGTTCACTGGGGTCAATACTTTTTGAGGCCTGAATT
TGTTGAGTCTACTTATATGTTGTATAAAGCAACTCAGGATCCTCACTACT
TAGAAGTAGGTAAAAAAGTTTTAAAAGCCATTCAATCACATACGCGAACA
ACTTGTGGCTATGCAACTATAAAGGACGTTCGAACCCTTCAAAAGGAAGA
TAGAATGGATAGTTTTGTCCTTGCTGAAACATTCAAGTATCTGTATTTAC
TATTTGCTGAAGATGCTGATTTGCCTGTAGAAATTGATGACTTTGTATTC
ACAACTGAGGCGCATCTACTCCCCTTATCTTTAGCAAGACTTTCGAATAT
TACTCGTGTTCCGGTAAGTCTATTTAGGTCCATCTCAAGCATTAAAAAAT
AATAATAATAATATTCTAATTGATCCCATTAGTTGCCTGAAAGAAAGTCC
GAGGATATGCAACAGTCGATATATGATGAAGATGTAGAACTTGCTTGGTC
CTGTCCAAGCACGGTATATTTATTCCCCGAGAAATCGCCCAAACAGTATG
CTTCAGAAATAAGAGAACCTTTGGCGAATATGGTAACGGACAAATGTCCT
CTTCGAAGTACTCTAACAACACGACGGATCACTGGCTCAGAATTTCAACC
CACAAACCCGGATCATATCAAGTTACTTCTAGAAATGGGACTCTCTGTTG
TGTCTTTACCTGAAGGCGGTATCCAATTGCTTCACACGGCTGGCAATGTA
AGCCCTAGAATTAGAACCCTTTTTCAAGTGTTGTACATTGGAGTACTAGC
CTTAGTTGTAGGAATTAGTGACAAGCCAGTTGAAATAAAGATTGGGGCCT
GTATTTTTTTATTTTTACCATTTGATAAGACGACGATTTTGGTGTCGAAG
ATGACTTTTCAAACACTGATTCTCTCATATCAAATTTTATCATGCATGTG
ATAAGTGAGTTGGTTATATAATATTGTACATATGTGAGTATACAATATGT
ATATAGAGAAAGACTTATGTGTACATATTGTGATGAGTGTTTTTGTATTC
AGCTCTACACATTGACGTATATATATAGTTATATTCTTTTTGAAAAACAA
TATTTGAATTACTTCCTTCACTCATTTTCTCTTATCCAATAAATTTGAGC
TTTATTTATTACTAATGAAGAGATAAATTCAAGTCAAGTTATTCATCAGA
ATCTTTTTTTATTTCTTCAATATTACGTTTATAATGCATACAGATTGTTC
TATTATTCATATATGTTTTACCGTGTGCAGGACCCTTTTTTTTTTTAATT
TTGACTTTTTAAAGACTTTTTTTTTTCTTTTTTTGCGGAAAAAAAAAATT
CTGATCTTTTTTAGAATGAACATTTTTTAAGAAAGGGCTAAGCCTTTTTT
TACCCTTTTAAATGATTCATTGGTTAAAGGTTTTTAGTAAAAAATATTTC
TTTATATTTTTATTCTCTGAAACTTTTTCTTCCTCTATATGTTCACTAAT
TCAGAGTGCGGGACTAGGGAAAGGCCACCCTAAAACCGACCCTGATGTTT
CCCTATTATTTGGCTTTTCTACAGTGTTGAAAAAGCTTTCATAATAGTAC
CCGATAATAGCAGTATTTGGTAGCAAGAAAAATTCGCGTAGTACGGTGAG
GTTTTTTTTTGTACTAAACGCCGTATAATGTGATAAATTATTTTTCTAAG
TCCACTTTTTACTATTTTCCCGTTCCTTTTTTTTAGTATGGTTAAGACAA
AAAAAAACACAATTTATTCGTCATAAATTATTTAAAATAATGTATGCCAG
GCAAGATACCTGTAAAATTTAAACTTAATCGGGTATTTAATTGACTTTTA
ATCCGGTCATTTCAATACTATAAAATTTAAACAATGGGAACATAACCAAT
ATTTATTCAGCAACCTTTTAATTGCAAATTTTTATAATAAGTAATAACCA
AAAGTCTGGTCATGAAAACAAATACTTGAATTTTATACTTCTATTATATG
AATATATAGGCATAATATTGAAAAACATCAACAACTACTAAATTTTTGTT
TACCTCAATATATAGTTTTTTTTAATTTTTTATCATAATATTAGAAAAAC
GCGATACAAGGGGAATAAAGCACACTATATGAGGAGTCGGAACAATTCCG
AAATTCGCGGTGTTTGAAATCACGTTATGCAGGGACCTCCTGTATTTTAA
TAAATGAAATATTCCCCTGATATATGTTCTTTGATATATAATTAATATTT
TTATACAGCAATTATCAATTTGTTGAGATATTTATTATAAAAATATATAT
ATAACATAACTCATCATTGAAACAGACCTACACATTAATGTGTTTGTCAC
ATTTATTTTATGTATTTATACATTGGGGTTGCTTCTAAAATATAACTACA
TTAATTTTCAAAATTTGCAGGCCAAAAGCCCTGAAGATGCTGAAGAGGGT
CTTCTATTTATGCAAGAAATCATTGAAATATCCAAGACCTCAATTACTGA
TGTACAACCTCGAGTAGTGACCTTTTATAATAATGAAGAGAAAAGGATGG
AGAAAATATATGCGGGCCCTGCCCAGTTTGGAAAGGAATTATCAAATGGC
TATAAAGTAGGCCAATTAGAATTTTATCTACTAATATAATGTCCACACAC
TTTATTAATTATGAACAGGCGAAAGGAAAGGCCGTGGTAGCATCTCCCTA
TAAGGCATGTGGTGATTTAGAAAACGGAAAAGAATTCTGGGGCAAAATTG
GTATTGTGGAGAGAGGGGATTGCATGTTTATTGGTAATTTTTGATTGAGA
GTCTTAATTGGGGTTTTACTTTTGTAACAAAATGTTCTTTTATTATTATT
ATAGAAAAAGCACGACTACTTGAGAGCTTAGGAGCTGTTGGTGGGATTGT
GATTGACGCAAATGATGGATCTACTTCAAAAGCAAGTCCGTTATTTGGGA
TGACAGGAGATAAAGGAAAATCTGATGATGTATGTATTTTTTGACAATTT
AAATCATCATAATAATGTGATTTCATTTTTGGATTAGGTAAGCATACCCC
TAGTTTTCCTCTTTAATGAAGATGCAAAGCYTTTGTTAMAAGCCATTAGA
AATTATCCAGATATGGAAGTCACTCTTCAAGAATATATTGGTAAGGCATT
ATTTATTTTTTGAATAAAAGATCAATTAATTAATCTTTTGGCTTTAGATA
ATGGTGATAAGAAAGATTCTTCATCTCCAATAGATATGAATTTCGACTTT
GCTGGTCCGGTCAAGAGCTTCTTGGAGAAATCCAAGAAGCAAGTTCAAAA
ATATTTTTCAACAATAAATAAAAGCAGCTCAAATATCCAAAAAGGTCAAG
TGGAGGAGGAGGAGGATGAAGACGAAAAGTACTTTCTTAAGCATGATGAG
CCTGCTATTGATGATGACGTTCGGAAATTAGAATTGGAGGAAGATTCTAT
ATCTGCAGAAGAAGATGAGGTAAAGAGTCTTCCCGACTCACCCCATGAAG
GTGATGTATCTGTCTTAAAAGACGTTTTTCGTATGGCTGATGATGAGATA
AGAAATTTAATTGGAAATAGTCCTTGCTGCCGCTCTCCTGAGAGATTCAT
TAACAACATTCTTAACATTCCCATCAAATATCTTTTTGGAAGATTCTACG
CAATGACTGCGATTCATGGTGGCAAATATGCCCTGTCGCAGAGTTTACAT
TATATTGATATGGGCATTTCTCCAACTGATGGGGAAAAGTCCATAGGGAA
GTCCGAGGAGAAGGAGACCTTGATTCTCTTAGCCTCTAAAGCCTTTCACG
AAACACTTTATCCTTGCTATAAAGACCTTCTCACCAAAGAATCAGAGGAA
CAAATTAAATTTAGTCATTTACTAACACCGTTTAGAACGTATCTTATTTC
AATTAAAGGAATAATCGATTCCATCCGAGTGACCTCTCCCACACTCCTCG
TAAGTCAGTTGAGGGAGATATCCTTCCAGGGACAGAGAAACAAAGATGAA
CTGTGATGATGATAAGGAAATCGATTTTATTTGTTCATCCTCATCAAATG
AAGATTCATACAGGCTTTATTTAATTTTTATTTTTGGGTATAGTTAAGTG
AAGAAAGTAATTGATTAATTATTTTCTCTTTGTTTCTACGAAACTTTTAT
ATTTCTTAAAAAATAAGAACATATTATTGTATTTATGCGGGTTTTCCCCC
ATCCCCTTGAAATTCGCAAGAGTAAACTATTTTTATAAAAGGTGTCTATT
ACTTATTATCCTTGTTAGTGTTTTTTATATATAATACATAATTATTTAAC
TATATCAGAATGTATAAGCTATATCATCTTTAGTGCATTTATTTACCATT
TTTTAGGGAAAGTTAATTATTACTATTATTATGATTTGTTAAGTTTATTC
ATCAAAGTTATAGTCTGAATTTATATTATTATTTTAAAGTGTTTTTAACT
TTTATTATGAATTGATGAAATACAATAAAAATTATGTATAGCTTTATTGC
TTATATTCCATATTTTGTTTGGCATCAGGACTATTTCCAATGATTTAACT
CAAACTAACGATAATTAATTAATTATTGATTTATTACTAATAATGAAGAT
TTACCTTCCCAATGATTAAATCATGTACAAAATACATTAAAGTTCCTCAA
ACCTGTTTTTCTTTGAGAGCAAAAATATTTTTTTTTCTAAATGCGTTACT
ATCTGAGAGAGAGAGAGCACCTAAGAGTGCATCATCCCGTGATCATCTCC
TCCGTCATCCTAGGAGAGAGCAAGCGAAGGCGCATGCAGGAGGCAGGTAC
TACCACTAAATGCTTTAATACTAACCAACTAACTGCTTACACAACTCAAC
GTGTTTCAAAAATTCAAACGCAGGTCATTCAGTCACAAGATCCTCTTAGT
TCTCCTCATTCCATTTACCTTTGAGTCTACTTCTCCTAGGTTCCCTCAAA
ATGTCTTTTGTTCAAGTTGATAAAGATTCCCATTTCTCTTACCAGAATTT
GCCATATGGTATATTCTCTACTCCTGAGACACCAAAGAAACGGATCGGTG
TTGCCATTGGGGCCTACGTTTTGGATGTGAGCAAATTATGGAATCGATTC
AAAGGTCCCTTCATGAACGCAGAGGCTCAGAAAGTTCTTGGGGAAGCCGA
GACGTTAAATGCATTGATGGGGTTGACGCCTGAGCATTGGGTAGAGACGA
GAGCTGTAATTAAGGGTCTTTTATCCTCAGATGATCCGTTGTCAATTAAA
AATGAACGGGATAATTATCTCATTCCTATGGATAAGGTCACTATGCATCT
ACCGGCTCAAATCGGAGATTATACAGACTTTTATTCCTCTATTGATCATG
CCACTAATGTGGGAACAATGTTCAGGTTAAAAAAATTTATATATATTATC
TTGTTTAAGAATCGAAACATAAGTAATCAATATGAATTTTAATTAATCTC
TTTATGCACTATAGAGGAAAGGAAAATGCTCTCATGCCTAATTGGAAGCA
TTTACCTGTTGGATATCATGGTCGATCCAGTTCTGTTGTTGTCTCAGGAA
CGCCAATCAGACGACCCAATGGACAAACAAAACCTGTAGAGACTGAACCT
CCTCAATTTGGCCCATGTAAACTACTTGATTTCGAATTAGAAATGGCTTT
CTTTGTCGGTGGTCCAACTAACGAACTAGGAAAGCCTATTTCCATCGAAA
AAGCCCAGGATCGAATCTTTGGAATGGTGGTAATGAATGATTGGAGTGCA
AGAGATATTCAAAAATGGGAATACGTACCACTTGGTCCTTTCCTTGCTAA
AAATATGGGCACAACCATTTCACCCTGGGTTGTTCCCATTGAGGCAATGA
AACCCTTCTTGACTGAAAATTACCCTCAAGACCCTGCTCCACTTCCCTAT
CTTAGACATAATGACTCTTTTAATTTTGATATTAAGTTGCAAGTCTCCAT
CAAACCTGAAGGTGCATCTAAGGAAGACGTTGTTACTAAATCTAATTTTA
AATTCATGTACTGGACAATGAAGCAGCAATTGGCTCATCACYCCGCCACT
GGGTGCAATATGAGACCAGGAGATCTCTTGGCCTCCGGAACCATTTCTGG
GCCTGTAAGTACTTATTTCAATTAATTTATATTATACATACAATGATTGT
CTGTTCCCACGATCTATAGGAAGAGAGTTCTTATGGTTCTATGCTAGAGC
TTTCCTGGAAGGGATCCAAAACTGTCAAGCTTGAGTCCTCTGGTGAGGAA
AGAAAGTTTATCAAAGATGGTGATGTAGTCAATGTAAGTGGTTTTTGCCA
AGGGAATGGATATAGGGTGGGATTTGGTGACTGCTGGGGAAAAGTTCTTC
CAGCTAACCCACTCTAAATGATCTCAATTTCATCAATCAAAAAATCTTAT
ATTTTTTTATTCTCAAGTTTTATAGTTTTAATTTTATGGGCGCATTTTAG
TTTTAAGAATGAATATTATATAATTTT

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