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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR001382 | Glycoside hydrolase, family 47 | PRINTS | PR00747 | GLYHDRLASE47 | coord: 173..192 score: 42.14 coord: 383..407 score: 45.33 coord: 40..60 score: 41.95 coord: 268..285 score: 53.97 coord: 329..345 score: 38.94 coord: 122..140 score: 62.66 coord: 442..462 score: 65.31 coord: 85..99 score: 45.4 |
IPR001382 | Glycoside hydrolase, family 47 | GENE3D | 1.50.10.50 | | coord: 22..481 e-value: 4.1E-151 score: 503.2 |
IPR001382 | Glycoside hydrolase, family 47 | PFAM | PF01532 | Glyco_hydro_47 | coord: 40..479 e-value: 1.8E-137 score: 458.5 |
IPR001382 | Glycoside hydrolase, family 47 | PANTHER | PTHR11742 | MANNOSYL-OLIGOSACCHARIDE ALPHA-1,2-MANNOSIDASE-RELATED | coord: 3..577 |
IPR001382 | Glycoside hydrolase, family 47 | SUPERFAMILY | 48225 | Seven-hairpin glycosidases | coord: 32..480 |
IPR015377 | Fumarylacetoacetase, N-terminal | PFAM | PF09298 | FAA_hydrolase_N | coord: 1047..1150 e-value: 2.0E-23 score: 82.2 |
IPR015377 | Fumarylacetoacetase, N-terminal | GENE3D | 2.30.30.230 | | coord: 1034..1152 e-value: 1.5E-32 score: 111.4 |
IPR015377 | Fumarylacetoacetase, N-terminal | SUPERFAMILY | 63433 | Fumarylacetoacetate hydrolase, FAH, N-terminal domain | coord: 1033..1150 |
None | No IPR available | GENE3D | 3.50.30.30 | | coord: 673..762 e-value: 1.1E-10 score: 40.7 |
None | No IPR available | PANTHER | PTHR11742:SF8 | MANNOSYL-OLIGOSACCHARIDE ALPHA-1,2-MANNOSIDASE-RELATED | coord: 3..577 |
None | No IPR available | SIGNALP_EUK | SignalP-noTM | SignalP-noTM | coord: 1..24 score: 0.705 |
None | No IPR available | SUPERFAMILY | 52025 | PA domain | coord: 670..761 |
None | No IPR available | TMHMM | TMhelix | | coord: 7..26 |
IPR003137 | Protease-associated domain, PA | PFAM | PF02225 | PA | coord: 660..758 e-value: 4.5E-11 score: 42.2 |
IPR002529 | Fumarylacetoacetase, C-terminal | PFAM | PF01557 | FAA_hydrolase | coord: 1156..1444 e-value: 1.4E-47 score: 161.8 |
IPR011234 | Fumarylacetoacetase, C-terminal-related | GENE3D | 3.90.850.10 | | coord: 1153..1442 e-value: 1.6E-113 score: 378.1 |
IPR011234 | Fumarylacetoacetase, C-terminal-related | SUPERFAMILY | 56529 | FAH | coord: 1152..1449 |
IPR005959 | Fumarylacetoacetase | TIGRFAM | TIGR01266 | TIGR01266 | coord: 1034..1449 e-value: 7.5E-189 score: 625.7 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000007844 ID=EMLSAP00000007844|Name=EMLSAP00000007844|organism=Lepeophtheirus salmonis|type=polypeptide|length=1452bp MGFQDIWTSLFLVVVPLLISNSFAMSTKEKMELKLEAKDMFYHGFNAYMD NAFPADELMPLSCRGRFRGLEPDRGDIDDAMGNFSLTLIDSLDTIFLLGD LDEFEIGVLKVINTVTFDHDISVSVFETNIRVVGGLISSHILAELVKDKF YQMKWYQGELLNMALDVGNRLLPAFNSSTGLPHPRVNLRHGIKPGKVRQV GETCTACAGTMILEFAALSRLSGEFVFEEKASAAMDVLWSARNRMSNLVG NVLSINTGDWIRRDSGVGAGIDSYYEYVAKAYILLGEDKYLTRWETHYAA VMKYLSSDSMPGLLQDVHMHRPSSYSKHFLDSLAAFWPGLQVLMGDVKPA IEAHEILLQIMDRHNFIPEAFTADFQVHWGQYFLRPEFVESTYMLYKATQ DPHYLEVGKKVLKAIQSHTRTTCGYATIKDVRTLQKEDRMDSFVLAETFK YLYLLFAEDADLPVEIDDFVFTTEAHLLPLSLARLSNITRVPLPERKSED MQQSIYDEDVELAWSCPSTVYLFPEKSPKQYASEIREPLANMVTDKCPLR STLTTRRITGSEFQPTNPDHIKLLLEMGLSVVSLPEGGIQLLHTAGNAKS PEDAEEGLLFMQEIIEISKTSITDVQPRVVTFYNNEEKRMEKIYAGPAQF GKELSNGYKAKGKAVVASPYKACGDLENGKEFWGKIGIVERGDCMFIEKA RLLESLGAVGGIVIDANDGSTSKASPLFGMTGDKGKSDDVSIPLVFLFNE DAKXLLXAIRNYPDMEVTLQEYIDNGDKKDSSSPIDMNFDFAGPVKSFLE KSKKQVQKYFSTINKSSSNIQKGQVEEEEDEDEKYFLKHDEPAIDDDVRK LELEEDSISAEEDEVKSLPDSPHEGDVSVLKDVFRMADDEIRNLIGNSPC CRSPERFINNILNIPIKYLFGRFYAMTAIHGGKYALSQSLHYIDMGISPT DGEKSIGKSEEKETLILLASKAFHETLYPCYKDLLTKESEEQIKFSHLLT PFRTYLISIKGIIDSIRVTSPTLLLSEESSLKMSFVQVDKDSHFSYQNLP YGIFSTPETPKKRIGVAIGAYVLDVSKLWNRFKGPFMNAEAQKVLGEAET LNALMGLTPEHWVETRAVIKGLLSSDDPLSIKNERDNYLIPMDKVTMHLP AQIGDYTDFYSSIDHATNVGTMFRGKENALMPNWKHLPVGYHGRSSSVVV SGTPIRRPNGQTKPVETEPPQFGPCKLLDFELEMAFFVGGPTNELGKPIS IEKAQDRIFGMVVMNDWSARDIQKWEYVPLGPFLAKNMGTTISPWVVPIE AMKPFLTENYPQDPAPLPYLRHNDSFNFDIKLQVSIKPEGASKEDVVTKS NFKFMYWTMKQQLAHHXATGCNMRPGDLLASGTISGPEESSYGSMLELSW KGSKTVKLESSGEERKFIKDGDVVNVSGFCQGNGYRVGFGDCWGKVLPAN PL back to top
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