EMLSAT00000007860, EMLSAT00000007860-703707 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007860
Unique NameEMLSAT00000007860-703707
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s45supercontigLSalAtl2s45:966813..967723 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007860 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007860EMLSAG00000007860-690626Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000034747EMLSAE00000034747-743675Lepeophtheirus salmonisexon
EMLSAE00000034748EMLSAE00000034748-743676Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780186auto780186Lepeophtheirus salmonispolypeptide
EMLSAP00000007860EMLSAP00000007860Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007860

>EMLSAP00000007860 ID=EMLSAP00000007860|Name=EMLSAP00000007860|organism=Lepeophtheirus salmonis|type=polypeptide|length=172bp
MHRRSLIILSLPLWTYYVGSHVIPSLKDDSIVFPYRAQLHDPSRDLINPI
YNKILPFKDTFMEVNFFKDLSVTQGPGLVYVDLFAKSYPMEKKIRMTSPK
ELIKNPLQVNKEILKFMLEKVFISPRGQLSIEKEQIGMYIFQKMGSLGLI
MYMQSFYEGVPVIYKDGKIAKE
back to top

mRNA from alignment at LSalAtl2s45:966813..967723-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007860-703707 ID=EMLSAT00000007860-703707|Name=EMLSAT00000007860|organism=Lepeophtheirus salmonis|type=mRNA|length=911bp|location=Sequence derived from alignment at LSalAtl2s45:966813..967723- (Lepeophtheirus salmonis)
ATGCATCGGAGGTCTCTTATTATTTTGTCCCTACCACTTTGGACTTATTA
TGTGGGTTCCCATGGTAGGTTTTTAGTATATCCCTTACATTGGCTTAACT
TTAAAATTGAATACCCCTTATAGTGATTGCCGATGGACCTCCAAATCATA
CGAGTAAATTCTCAATCTCCTCAGAGAATACTACGGGTAAGTGTTATAAT
AAATCTGTGAGGGTGGTCTGAAAAGTTTCTGGAATCAACGACAAGATAGA
AGCATTTGTAAATAAAAGCTTGTCACATACATTTACATACACATAATAGA
TGTGCCATATTTTCATTTACGAGTGATGGCATCTTTACGTTGAGGTCAGA
AACCATTCACATCATCTGTGTATATGATTTTATAATGTATTTATTTTTTC
TTCCTTTAAAGATTTTGAGGGCTTCATTCGAAACTTTACTCAACGCTATT
TGACTCCAGTGATCCCCAGTTTAAAAGATGATTCCATTGTATTCCCATAC
CGTGCTCAACTTCATGATCCCTCACGAGACCTCATCAATCCCATTTACAA
CAAAATTCTTCCATTTAAAGACACATTTATGGAAGTAAACTTTTTCAAGG
ACTTAAGTGTCACTCAGGGTCCTGGTCTTGTTTATGTTGATTTATTTGCA
AAATCATATCCAATGGAAAAGAAGATTCGAATGACTTCACCAAAGGAGTT
GATTAAAAATCCACTACAAGTGAACAAAGAAATCTTAAAATTTATGCTCG
AGAAGGTTTTTATTTCTCCTAGAGGTCAACTCTCCATTGAGAAAGAACAG
ATTGGCATGTACATATTTCAAAAAATGGGTTCTTTAGGGCTCATAATGTA
TATGCAGTCATTTTATGAAGGTGTTCCAGTCATTTATAAAGATGGGAAAA
TTGCCAAGGAA
back to top
Add to Basket