EMLSAT00000007935, EMLSAT00000007935-703782 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007935
Unique NameEMLSAT00000007935-703782
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s469supercontigLSalAtl2s469:255497..258790 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007935 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007935EMLSAG00000007935-690701Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000035122EMLSAE00000035122-744050Lepeophtheirus salmonisexon
EMLSAE00000035123EMLSAE00000035123-744051Lepeophtheirus salmonisexon
EMLSAE00000035124EMLSAE00000035124-744052Lepeophtheirus salmonisexon
EMLSAE00000035125EMLSAE00000035125-744053Lepeophtheirus salmonisexon
EMLSAE00000035126EMLSAE00000035126-744054Lepeophtheirus salmonisexon
EMLSAE00000035127EMLSAE00000035127-744055Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775381auto775381Lepeophtheirus salmonispolypeptide
EMLSAP00000007935EMLSAP00000007935Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007935

>EMLSAP00000007935 ID=EMLSAP00000007935|Name=EMLSAP00000007935|organism=Lepeophtheirus salmonis|type=polypeptide|length=590bp
MSIVDLGGEHSPSPHHPHLVCTKMTGLNCVKNGFPASYXLHSVDLLPPSD
NPGYISITLTSPPGEIRVVHGNEDLHKTILDVVHSSSYNWKGDTTVLHKG
EGWILRFGEGIQEEEDGVDRLIFRSTKGCLLACAILERIITNGWEIVAST
ELTTTPNFELCTWIIKKCSTPLYNGEVSCLLFDCDNKIKILGTKSQIQIN
NVVRRAIDKKWPKGLLCDSSDKVPVTLKKEESDSKKSNNDMLEEIDRELK
ASRDGLDQIDNGEPEHEKTPRPGSKSSFGKNIKRFKMILIVQGICVEFEL
WGSPWRPTKDSERVQSRLLVIELIHSLFCRQWKLVTTCGNLLPSSSHDTL
FFCRDGRILPALGGEKGLSALELERPNVIRFYNVNVESKLKSTIIESWSH
GLSCKETIIEHESEDVKSLYCNDHPWKQNSCQTWESTSESRLLTQKLIKT
MSANNYNLYGSIRMNRHEGSQSSLIIFRQSNISFSESMCLHLSGQNKLCI
IGGGADERETXRNAIETRWPYPISQDKNMESQVHLFKVKRYPWANSYGHK
DLDKIVKFAASILPPHLSFSSPKNMDSDSGKSLILFALKV
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mRNA from alignment at LSalAtl2s469:255497..258790+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007935-703782 ID=EMLSAT00000007935-703782|Name=EMLSAT00000007935|organism=Lepeophtheirus salmonis|type=mRNA|length=3294bp|location=Sequence derived from alignment at LSalAtl2s469:255497..258790+ (Lepeophtheirus salmonis)
TTTGTAAGTACGTACATATGTAAAGGAATAATAAACTGGGGAAAGCAGTT TTTTCTTCTTCGGTATCTTCACTAGGGAGTTAAAAGAAGAAGAAGAAGAA GGGGGAATTAAGAGTGCAATGTCTATAGTGGATCTGGGCGGTGAACATTC CCCCTCCCCTCATCATCCTCATCTTGTATGTACTAGTAAGTACAGATCAT CTTCCATCCTCTTGAACAATTTTTTTTTATCAGTGTCAAATAGAACACAC CATTTTTCAACTACTACAGGATTGCACTGAAAATTATTATTACTAACAAG TGGAATTGAGTGAATTTAACCATTTCGCGAAGAATATAGAAGTTATCATT TTCAAAATGTAACAACTCGTCTAGTATTATAGAGTGAATAATTACTTCAT ACCATCACAGTGATATTAATACTGTATACTATATAAAAGATCATATTATA TGTATGTATAGAAATGACGGGTTTAAACTGTGTAAAAAATGGTTTTCCAG CGTCTTACNCCCTGCATTCAGTTGATCTTTTACCCCCATCCGATAACCCT GGTTACATCAGTATTACKCTCACGTCCCCGCCAGGAGAGATTCGAGTCGT ACATGGAAATGAGGACCTTCACAAGACCATACTCGATGTGGTACACTCTT CCTCTTACAACTGGAAGGGAGACACCACGGTATTGCATAAGGGTGAAGGA TGGATCCTTCGATTTGGCGAGGGAATTCAAGAGGAAGAGGATGGAGTGGA TCGGCTTATTTTTCGGTCTACTAAAGGATGTTTGGTAAGAATTCAATCTC CATGGGATCAAAAGACGGAGATAAATGCTCTGCAAAATTACCCATCAATA TCAGGGGGAAAATAATCATAAATCTACGCAACTGATGTGTAGGGATGGTA ATATTGTCTAAATTGCGGTGTGGGTAAAAGCCTGAGAAAATGCGATAAAA AGTATGGTAACTTTGAGAGACTTCATATCTGCTGAAAGAGATCACTATAA ACTATAGTTATTCTAGTTCGCTGATACGTTAGAATTTTTTCAAAATAGAG AGAAAATGCCCATCCCTTGAGTTAGCATTGATCATGCTACCTAGGTACCT ATGTATCAGTTGCCCAGACGGATGATTACTTTTGCCCCCTTTACAAACAT CATTTATAAGTTGTTAATGATTACGATACAAAAATCGTTTCAAGAAAAAA AATATATTTTTGTGTTTGTTTATATAAGGGTGTTAATCTATGTATTGTAT ACATATATATATATATATATTTTATTTCTAAGTCGATTTCAACACTTGAG ACTACGTAGCATGGCATGCCCCCATTTTTTTAATCGAAAAGAAAACTGCA TAGAAAAATGTGTTGGACGTACAAATCAAAATAGTCTCTCACATAAAATA TGTTTATTTTACGTATGGAATATAACTTATTTGTGTATCCTTTATTGTAG CACATTATCAAATACAATAAAGCCTTTAATTATAATTTCAGCTTGCATGT GCTATATTAGAGCGTATAATAACCAATGGATGGGAAATTGTTGCTTCCAC AGAGTTAACAACCACTCCAAACTTTGAACTCTGTACGTGGATAATAAAAA AGTGTTCAACTCCATTATATAACGGTGAAGTCTCGTGTCTTTTGTTCGAT TGTGATAATAAAATTAAGGTATTGTTTATTTGTACACCTAGGTTATCAAA CTAAAATCTAAAACTAAAATCCATTGAATTATATTGTATGAATTAGATAT TGGGAACAAAGTCTCAAATACAAATAAATAACGTCGTGCGTCGAGCAATA GACAAAAAATGGCCAAAGGGATTACTTTGTGATTCATCAGACAAAGTTCC GGTCACGCTCAAAAAAGAGGAGTCAGACTCTAAAAAGTCTAACAATGATA TGTTAGAAGAAATTGATAGGGAGCTAAAAGCGTCTCGAGATGGTTTAGAT CAAATTGATAACGGAGAACCAGAACATGAAAAGACACCCAGGCCTGGATC AAAGTCCAGTTTTGGAAAAAATATAAAACGATTCAAGATGATCCTGATTG TCCAAGGTATATGTGTGTATTCAATTATAAGCATATGAGATTGTAGTTAA TATATTTGTACTCTAGGGCTCTCCATCGAGACCTACGAAAAAGTACAAGA GGATTCAATCTCGTCACTTAGTCATTGAATTAATTCCTTCTGTTTTTTGT TTTCTAGTGAATTTGAGCTCTGGGGGTCTCCATGGAGACCTACGAAAGAC TCCGAGAGGGTTCAATCTCGTCTCTTAGTAATTGAATTAATTCATTCCCT TTTTTGTCGTCAATGGAAGTTAGTAACTACTTGCGGAAATTTACTTCCAA GTTCTAGTCATGATACACTATTTTTCTGTCGTGATGGACGGATTCTTCCG GCTCTTGGTGGAGAGAAAGGTCTATCTGCCCTGGAGCTAGAAAGACCTAA TGTGATTCGTTTCTACAATGTAAATGTAGAATCTAAGCTTAAGTCAACCA TTATTGAAAGTTGGTCACATGGCCTAAGCTGTAAAGAAACCATAATCGAA CATGAGTCGGAAGATGTGAAATCTCTTTATTGTAATGATCATCCTTGGAA GCAAAACTCATGTCAAACCTGGGAATCCACATCCGAATCTCGGCTTTTGA CTCAAAAACTAATAAAAACTATGAGTGCTAACAATTATAATCTCTATGGA AGTATAAGAATGAATCGTCACGAGGGAAGTCAGTCTAGTCTAATTATTTT CAGACAATCCAATATATCATTCTCTGAGAGTATGTGCTTGCATTTATCAG GTATCTACATAGTATCTACTTTTTTTATACTGGGATCCTATAGCCCATAA TAATTATTTTCTATTTAGGTCAGAATAAATTGTGTATTATTGGAGGCGGA GCTGATGAGAGAGAAACGGMTCGTAATGCAATAGAAACTCGATGGCCTTA TCCCATATCTCAGGACAAGAACATGGAGTCACAAGTTCATCTTTTCAAAG TAAAGCGATATCCATGGGCAAACTCATATGGACATAAGGATTTAGATAAA ATAGTAAAATTCGCTGCCTCAATCCTCCCACCCCATCTTTCATTCTCATC GCCGAAAAACATGGACTCTGATTCTGGAAAAAGTTTAATACTATTTGCCT TAAAAGTATGAATTTACAATTCTGAATTAGCTAAAAGATTTCCTTATGTG CCTTTTTGGTTTTTATTTAGGGACTATCTACTCTTGGATGGCGTCTCATA ACTTCTCTTAACTCCTCCTCTGATACTTTACTAGCACCCTACTC
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