EMLSAT00000008049, EMLSAT00000008049-703896 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008049
Unique NameEMLSAT00000008049-703896
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s479supercontigLSalAtl2s479:216984..217669 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008049 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008049EMLSAG00000008049-690815Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000035576EMLSAE00000035576-744504Lepeophtheirus salmonisexon
EMLSAE00000035577EMLSAE00000035577-744505Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774700auto774700Lepeophtheirus salmonispolypeptide
EMLSAP00000008049EMLSAP00000008049Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008049

>EMLSAP00000008049 ID=EMLSAP00000008049|Name=EMLSAP00000008049|organism=Lepeophtheirus salmonis|type=polypeptide|length=205bp
MSVFTINGSAVLAMKGNDCVSIASDLRFGINRHTVMTDFPKTFEMGPGLF
VGLAGLATDIQTVQQKLNFRMKMFELREGRKMRPNTFSTMLSHLLYERRF
GPFFVNPIVAGYDYVENKPFISSMDLIGAITIPEDFVAAGTSEDSLMGMC
EALWFENMNPEELFEATSQAIMNSFDRDSLAGWGAEVHIIEKHQVTTRRI
KTRMD
back to top

mRNA from alignment at LSalAtl2s479:216984..217669-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008049-703896 ID=EMLSAT00000008049-703896|Name=EMLSAT00000008049|organism=Lepeophtheirus salmonis|type=mRNA|length=686bp|location=Sequence derived from alignment at LSalAtl2s479:216984..217669- (Lepeophtheirus salmonis)
ATGTCTGTCTTTACAATCAATGGAAGTGCTGTTCTAGCCATGAAAGGAAA
TGACTGTGTGTCCATCGCTTCCGACCTCCGCTTCGGCATCAACCGGCACA
CCGTGATGACTGATTTCCCTAAAACCTTTGAAATGGGCCCTGGCCTCTTT
GTGGGCCTGGCTGGACTCGCCACAGATATTCAAACCGTGCAACAGAAGTT
AAACTTCCGGATGAAGATGTTCGAGCTGCGGGAGGGACGAAAGATGCGGC
CAAACACTTTTTCCACCATGTTGAGCCACTTGCTCTACGAGCGGAGATTC
GGTCCTTTCTTCGTGAATCCCATCGTTGCCGGATATGACTACGTGGAGAA
TAAGCCCTTCATTAGTTCCATGGACTTGATCGGAGCCATCACAATCCCTG
AAGACTTTGTTGCTGCGGGAACGTCGGAAGACTCGCTCATGGGTGTGTTA
ATAACTCCAGACTCACTTGAACCATTTACGACTTGTCAATCTCTTAACTT
TTCTTTCTAGGTATGTGCGAAGCGTTATGGTTTGAAAACATGAATCCTGA
GGAACTGTTCGAAGCCACATCTCAAGCAATCATGAACTCCTTTGACAGAG
ACTCTTTGGCCGGTTGGGGTGCTGAGGTACACATCATTGAGAAACATCAA
GTGACGACGCGTAGAATCAAGACACGAATGGATTAA
back to top
Add to Basket