EMLSAT00000008076, EMLSAT00000008076-703923 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008076
Unique NameEMLSAT00000008076-703923
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s47supercontigLSalAtl2s47:287231..290661 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008076 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008076EMLSAG00000008076-690842Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000035668EMLSAE00000035668-744596Lepeophtheirus salmonisexon
EMLSAE00000035669EMLSAE00000035669-744597Lepeophtheirus salmonisexon
EMLSAE00000035670EMLSAE00000035670-744598Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775911auto775911Lepeophtheirus salmonispolypeptide
EMLSAP00000008076EMLSAP00000008076Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008076

>EMLSAP00000008076 ID=EMLSAP00000008076|Name=EMLSAP00000008076|organism=Lepeophtheirus salmonis|type=polypeptide|length=945bp
MPSTCCAPMCRTGYPGTPKDDDVFFHRLPLKNIPLLHCWIKAIHRKDFEP
NKHSRLCSKHFKQEDYKAIRTDSNPYRKKPVILIRRNLKIDAVPSIFDRV
PAKHPETRQTRRTTASVSPTRFKKEKNPRLKAEVPYFEEKEILSLLDIKK
KIKLSHLPSGTHLIKRKDNLLFCFIEGTIPQIHQSLQIFDNLTFKLCNQN
TIITQDKYNHICQSEKIETVSQVQNLIAFAKSLSIDITAKSKLEQCTTVL
STIENEENNFQRKIDFIAEQLDLLSKPERTRQFSIQFLAMCILWESCSPS
LYKRLVYEDCFCMPSISYLRNLTGPLNPSTEIPSSSTNSYLKQRLELLPP
EHRKGILIFDEVYSSQRIEFISGKLYGSETPTGTILCFMIRSVTYNYNDV
VAMVPVFTLNSKIIKNWTMEAIKMITKLGFDVVGLVCDGYASNIEFYNKE
LCHGALQSSIENPYSPGNRLFLLFDTVHLFKKIYSNFLNKKTLVLPSFRE
KNEDEEKNFTASLDHIFQLHEIEDELQLNKKVLATNSIEKVQVNLAELFF
SPSTINGLLKYSPENPDWCHTSSFLEIINKFWNITSVRIPKSGFIERREE
RKFITINQRQNLDFLRNFLNWLLSWETLPFCYKNGLTKDTFMTAIHTTSS
IIELSEYLLDVKGLKFVCLGNITSDPIELHFGQYKQLSGIDYYLNCRQFV
KTEKIIRLKVLINSCKLNLSEFFYDLKEENDDSYEKDMHEIKSILDFYSF
ASSNFSINELQVNLMFFVSGYIASSIVDIFQIKNCDCINFLISDELITKN
IEFSDDDSHILLKSFQNQMDRGRLKKASDLIYLTTLHAHHLNELIFASSQ
AKMILLSSPNPRNLFIKLFIDLMKNGECIIPLGLKCKRKHIFEDYASHVA
FNFFNFSNKNKLNESDNIITQMSKKRSSTFHNPTDKKIVKLSSES
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mRNA from alignment at LSalAtl2s47:287231..290661-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008076-703923 ID=EMLSAT00000008076-703923|Name=EMLSAT00000008076|organism=Lepeophtheirus salmonis|type=mRNA|length=3431bp|location=Sequence derived from alignment at LSalAtl2s47:287231..290661- (Lepeophtheirus salmonis)
ATGCCTTCCACTTGTTGTGCTCCAATGTGTAGGACAGGTTATCCTGGCAC TCCGAAGGATGACGATGTTTTTTTTCATAGGCTACCATTGAAAAATATAC CTCTTCTTCATTGTTGGATTAAGGCAATACATAGGTAGGTAATATTTTAT GACTTGTTGGTTAGTACTTTTTATTAGTGTTGGATTCGAGTATTATTCGA ACTCGAAAAAAACTAAAGCCGATAATTTTCTGAAAATTATTGGACCTCGC CCGAAATACTTAAGTGAAAAATTTGACTCTACTTGAACTCGAATAACCAT TAGAAATCGAAACATTTGAGTAATTATTATTAGTGAAATTTCTAGTATCA ATCAAAAGGGCAGTAGTAAAAAACTACAGACGATATTTTCTTATTTGTAG AAGAGTTGATCATTTATTAAAAAGTAGAAACCATGACATATGTAGAAATT CTCAAGAACTCGAATTTGAATATTTTGAGTCGAACCCAGCACTGTCACAG TTAAAAAATTTGATCATCATTTTTTAAGATGTATTTGTTATACATAAATA TATATTATTTTATTTTTACCTAAATCTTGAACACCAAAAGAACTTATCCA CCATTATAATAATTTTACTGATGCATATTTTTTTAGAAAAGATTTTGAAC CGAATAAACATTCAAGGCTATGTAGCAAGCATTTTAAACAAGAAGACTAT AAAGCAATACGAACAGATTCAAATCCCTATAGAAAAAAGCCAGTTATTCT CATTCGTCGTAACTTAAAGATAGATGCAGTTCCATCTATTTTTGATCGTG TTCCAGCTAAACATCCCGAGACTCGGCAAACTCGTAGAACTACTGCTTCA GTTTCACCTACTAGGTAAATATACCAATTATCATGATCTATATTAACTCA ACAAATAAGTCAGCCCTTTTGAATCTATTAACGTTTTTTCTATAATTTTT TACAGATTTAAAAAAGAAAAAAATCCTAGATTAAAAGCAGAAGTACCTTA TTTTGAAGAAAAAGAAATATTATCTTTATTAGATATAAAAAAGAAAATCA AATTAAGTCATCTTCCATCTGGCACTCATCTTATAAAAAGGAAAGACAAT CTACTTTTTTGCTTTATTGAGGGAACAATTCCCCAAATTCATCAATCTCT TCAAATATTTGATAATTTAACCTTTAAATTATGTAATCAGAATACAATTA TCACTCAAGACAAATATAACCATATATGTCAGTCAGAGAAAATTGAAACT GTTAGTCAGGTTCAAAACTTGATTGCTTTTGCTAAGTCTCTTTCAATTGA TATTACGGCAAAATCCAAGCTTGAACAGTGTACAACAGTTCTAAGTACGA TAGAAAATGAAGAAAATAATTTTCAAAGAAAAATAGATTTTATTGCTGAA CAGTTGGATCTCCTATCAAAACCAGAAAGAACGCGACAGTTCTCCATACA GTTTTTAGCCATGTGTATTTTATGGGAAAGTTGTAGCCCCTCTCTATATA AAAGACTTGTATATGAAGACTGTTTTTGCATGCCAAGTATTTCATACTTG AGAAACTTGACTGGACCTTTAAATCCAAGTACAGAAATACCCTCTTCTTC TACAAACTCATATCTTAAACAACGGTTAGAGTTGCTACCTCCAGAACATC GAAAAGGAATATTGATATTTGATGAAGTATATTCTTCACAACGCATTGAA TTCATTAGTGGAAAATTGTATGGTTCTGAGACTCCAACAGGAACTATTTT ATGCTTTATGATAAGAAGTGTCACTTATAATTACAATGATGTTGTCGCTA TGGTTCCTGTATTTACACTTAACTCCAAAATCATCAAAAATTGGACAATG GAAGCAATCAAAATGATTACGAAACTTGGATTTGATGTAGTTGGATTGGT GTGTGATGGATATGCTTCTAATATAGAATTTTATAACAAGGAATTATGTC ATGGAGCCTTGCAATCATCGATTGAAAATCCGTATTCACCAGGAAATCGA TTATTTTTGCTCTTTGATACAGTCCATTTGTTTAAAAAAATTTATAGCAA CTTCCTAAATAAAAAAACTTTAGTATTGCCATCGTTTAGAGAAAAAAATG AAGATGAGGAAAAAAATTTCACTGCTAGTTTAGACCACATATTTCAACTT CATGAAATAGAAGATGAACTCCAATTAAATAAAAAAGTCTTGGCAACTAA CTCAATAGAAAAAGTACAAGTTAATTTGGCCGAACTCTTTTTTAGTCCAT CGACAATCAATGGACTTTTAAAATATAGTCCGGAAAATCCGGATTGGTGT CATACATCCTCATTTCTTGAGATAATTAACAAATTTTGGAATATTACGTC TGTAAGAATTCCCAAGTCAGGTTTTATTGAACGGAGAGAAGAACGAAAAT TTATTACAATAAATCAAAGACAGAATTTGGACTTCTTACGCAACTTTTTA AATTGGCTCCTGTCATGGGAAACTTTACCGTTTTGTTACAAAAATGGATT AACCAAAGATACATTTATGACAGCTATTCATACCACATCGAGTATTATAG AACTCTCAGAGTATTTATTGGATGTAAAAGGACTAAAGTTTGTTTGTTTA GGTAATATTACATCTGATCCAATAGAGCTCCATTTTGGACAATACAAACA ACTTTCCGGTATTGATTATTATTTGAACTGTCGACAATTTGTTAAGACCG AAAAAATAATCCGACTCAAAGTGTTAATCAATTCCTGCAAGCTCAACTTA TCAGAATTTTTTTACGATTTAAAAGAAGAAAACGACGACTCATATGAAAA AGATATGCATGAAATTAAGTCAATTCTCGACTTTTACAGTTTTGCATCTT CTAATTTTAGTATAAATGAATTACAAGTCAATCTTATGTTCTTCGTATCA GGCTATATCGCATCGTCAATTGTTGACATTTTCCAGATCAAGAATTGTGA CTGCATTAACTTTTTAATTTCTGATGAGCTCATAACAAAAAATATTGAAT TCTCAGATGATGATTCTCATATTCTGTTGAAGAGTTTTCAAAATCAAATG GATAGAGGACGTCTAAAGAAAGCATCAGATTTAATTTACTTGACCACATT GCACGCACATCATCTTAATGAGTTGATATTTGCTTCATCTCAAGCCAAAA TGATTTTATTATCCAGTCCAAACCCTCGAAACTTATTTATAAAATTATTT ATAGATTTAATGAAGAATGGGGAATGTATAATTCCTTTAGGCTTGAAATG CAAAAGAAAACATATTTTTGAAGACTATGCTTCCCATGTAGCCTTTAATT TTTTCAATTTTTCAAACAAAAATAAGCTGAACGAAAGTGATAACATAATA ACACAGATGTCTAAAAAAAGATCGTCCACTTTTCATAATCCCACCGATAA AAAAATTGTTAAACTTAGCTCAGAATCTTGA
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