EMLSAT00000008112, EMLSAT00000008112-703959 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008112
Unique NameEMLSAT00000008112-703959
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s482supercontigLSalAtl2s482:405838..406684 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008112 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008112EMLSAG00000008112-690878Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000035806EMLSAE00000035806-744734Lepeophtheirus salmonisexon
EMLSAE00000035807EMLSAE00000035807-744735Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777350auto777350Lepeophtheirus salmonispolypeptide
EMLSAP00000008112EMLSAP00000008112Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008112

>EMLSAP00000008112 ID=EMLSAP00000008112|Name=EMLSAP00000008112|organism=Lepeophtheirus salmonis|type=polypeptide|length=262bp
AFVIDDRPQNITDISFNQINDLNLIIQDIDYGSKRFVFENIGYLNIGGSL
LNRQTRVAMYIRNTINGNQYINNVERRGDVVFQDFLAASHLTLINIQNQK
SVTVIDSAFENLNEVDLIRTGNCFVGSEQSESVPCTKRDLFVSTAVIGAT
WEQIVQHPLFIGGIVFALLALLLGICACCYFCRNKKKREMELVGYPPTTP
SSNVSSRQSTTKRSNLAYHVPTPILSQTPRESSRRHASTTMESKKSPQNC
ANYYKHSHTRTR
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mRNA from alignment at LSalAtl2s482:405838..406684-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008112-703959 ID=EMLSAT00000008112-703959|Name=EMLSAT00000008112|organism=Lepeophtheirus salmonis|type=mRNA|length=847bp|location=Sequence derived from alignment at LSalAtl2s482:405838..406684- (Lepeophtheirus salmonis)
GCCTTTGTCATTGATGATCGACCTCAAAATATAACAGATATTAGTTTTAA
TCAAATCAATGATTTGAATCTCATTATTCAAGACATTGATTATGGTAGTA
AAAGATTTGTGTTTGAGAACATTGGATATTTGAACATTGGAGGATCGCTT
TTAAATCGTCAAACCCGAGTGGCCATGTACATACGAAATACTATTAATGG
AAATCAGTACATTAATAACGTAGAGCGACGAGGAGACGTCGTATTCCAAG
ACTTTTTAGCTGCATCTCATCTAACACTCATAAATATTCAGGTGTGTATA
GTCCCCTCGCGATTATTTCAAATCTCCTTCTTTCTATATTTCTTTTAAGA
ATCAAAAATCCGTAACTGTCATAGACTCAGCCTTTGAAAACTTAAATGAA
GTAGATCTCATACGCACTGGGAACTGTTTTGTCGGATCTGAACAATCCGA
GAGTGTCCCTTGCACAAAAAGAGATCTATTTGTTTCAACAGCAGTGATTG
GAGCCACATGGGAACAAATTGTGCAACATCCTCTTTTCATTGGAGGTATT
GTTTTTGCACTTTTGGCACTCCTACTCGGGATATGTGCCTGCTGTTACTT
TTGTCGAAATAAAAAGAAAAGAGAAATGGAACTTGTGGGATATCCCCCCA
CAACACCTTCCTCTAATGTCAGCTCAAGGCAATCCACTACAAAGAGATCA
AATTTAGCATACCATGTACCCACTCCCATACTAAGTCAAACCCCGAGAGA
ATCCTCCAGGAGACATGCCTCAACCACAATGGAATCTAAAAAATCACCTC
AAAACTGTGCTAACTACTATAAACACTCTCATACACGAACGAGATAG
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