EMLSAT00000008158, EMLSAT00000008158-704005 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008158
Unique NameEMLSAT00000008158-704005
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s488supercontigLSalAtl2s488:76940..77870 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008158 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008158EMLSAG00000008158-690924Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000036002EMLSAE00000036002-744930Lepeophtheirus salmonisexon
EMLSAE00000036003EMLSAE00000036003-744931Lepeophtheirus salmonisexon
EMLSAE00000036004EMLSAE00000036004-744932Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771516auto771516Lepeophtheirus salmonispolypeptide
EMLSAP00000008158EMLSAP00000008158Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008158

>EMLSAP00000008158 ID=EMLSAP00000008158|Name=EMLSAP00000008158|organism=Lepeophtheirus salmonis|type=polypeptide|length=268bp
MMCVTVIFATLCLVASSQGDHSPVSSYSRSGGAPPLDNYGSGSARSEVLA
SYGLGRAGGDDNDLTGSGSELNEVGDPIAMLEKAIPGVPGQDYPIYAEAP
ETGFSCDGQIDGGYYADSGAECQAFHICASNGAGGLDKYSFLCPNGTIFN
QQYLICDWWFNFDCSQADSLAVSINADLLAARQEATLAAAESRINEPDFX
GSENVGVLAGYGVGDARAAGSESIGVLAGYGVGEARAAGSNYGVSAPRXE
SVIIEAVAPLSQYGNNGR
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mRNA from alignment at LSalAtl2s488:76940..77870-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008158-704005 ID=EMLSAT00000008158-704005|Name=EMLSAT00000008158|organism=Lepeophtheirus salmonis|type=mRNA|length=931bp|location=Sequence derived from alignment at LSalAtl2s488:76940..77870- (Lepeophtheirus salmonis)
ATGATGTGTGTTACAGTTATCTTTGGTAAGAGACTCAAAGATTTGTTCTT
CTCCCCACTTTCCTTACTCACATCTTTGTACATCATTTCAGCCACCCTTT
GCCTTGTTGCCTCCTCTCAAGGGGATCACTCTCCCGTTTCTTCCTACTCC
CGTAGTGGGGGAGCTCCTCCACTTGATAACTACGGGTCTGGTTCAGCCCG
CTCTGAAGTTCTCGCCTCCTACGGACTCGGACGTGCTGGTGGAGATGACA
ATGATCTCACTGGAAGTGGATCCGAATTGAATGAAGTTGGAGACCCCATT
GCCATGTTGGAAAAGGCCATTCCCGGTGTTCCCGGACAGGACTACCCCAT
CTATGCCGAAGCCCCTGAGACTGGATTTTCTTGTGACGGACAAATCGATG
GAGGTACAACTATTTAAACTAATGTTTCTAACCCCATTCTCTAAAACTTT
TTTCTATAAAGGCTACTACGCCGACTCTGGTGCTGAGTGCCAAGCCTTCC
ACATCTGTGCTTCGAATGGCGCTGGTGGATTGGACAAATACTCTTTCTTG
TGTCCCAACGGTACCATTTTCAACCAACAATATTTGATCTGTGATTGGTG
GTTCAACTTTGACTGCTCTCAGGCTGACTCTCTTGCTGTGTCCATCAATG
CGGATCTTTTGGCTGCACGTCAAGAAGCTACCTTAGCCGCTGCTGAGTCT
CGCATCAATGAACCTGATTTTGMTGGATCTGAAAATGTTGGTGTTCTTGC
TGGATATGGTGTAGGGGATGCTCGGGCTGCTGGATCTGAAAGTATCGGTG
TTCTTGCTGGATACGGTGTAGGTGAGGCTCGTGCTGCTGGATCTAACTAT
GGAGTGTCTGCTCCAAGGAGKGAGTCCGTCATTATTGAAGCCGTTGCTCC
ACTTAGTCAATATGGAAATAATGGCCGATAA
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