EMLSAT00000008257, EMLSAT00000008257-704104 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008257
Unique NameEMLSAT00000008257-704104
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s49supercontigLSalAtl2s49:363225..366513 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008257 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008257EMLSAG00000008257-691023Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000036639EMLSAE00000036639-745567Lepeophtheirus salmonisexon
EMLSAE00000036640EMLSAE00000036640-745568Lepeophtheirus salmonisexon
EMLSAE00000036641EMLSAE00000036641-745569Lepeophtheirus salmonisexon
EMLSAE00000036642EMLSAE00000036642-745570Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776885auto776885Lepeophtheirus salmonispolypeptide
EMLSAP00000008257EMLSAP00000008257Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008257

>EMLSAP00000008257 ID=EMLSAP00000008257|Name=EMLSAP00000008257|organism=Lepeophtheirus salmonis|type=polypeptide|length=825bp
MGRRKQFCPQKTGILEAFENTTKSKTEDDEESEADSNPHNKIKEEDEEED
EQSLFESPTISALHKRTLEGDEGEEKDQKDPSPNRLLSPFGVSQPHDFAS
TLLAAQQTLLNPAAFLSLNPSSLYAVQLAQLQAAQLLSQQPPLKRKLLEQ
EDSTSPLDLSGPSSKLGGVEQLHHHHVLSSHHALQDAMQIHAAAGLPSPP
KRPSFESSSPLDKMTDMTKGKQRHSAWQSQWINRGEENAKDIFKCTWCKE
CFHSFQALTHHMKETKHFGGSLPPSSSPGPFKNTSSSPSLSSGPSSITAL
PQISPPKSNPPPNTNPSASSPLLDTNSSYEMNCSSGPKKRDILKEQLPIP
RKLVRGQDVWLGKGEEQTRNILKCMWCGESFRSLEVMTKHMQETKHYTKV
ISQDQISSWKSNNQVSNGSSSSSVPPAVTSPSKDNKDQPMNSILSCKVCE
TSFQTLKDLSDHMIKNNHCINSPKSPLKNSSPPASVTSVSNNNNNFTFPP
KEKRKKSLPVKKLLELERSYEKGTTMKFPCDKCGISFPFHLFAEHIRNCN
GLVSRASSSPEQKRSESLSPPTIAPVLTNRMSSTRKSHDGGDSNILGSLE
EMVSGNFKGLPRDDVVIPVIKEGQDEDIAVDEEEQVVLHHIKSSPSSVKS
KENSHSNKNPLEALQMLCDKNEKQTQNFYGGGGGTPTGGNPHMLGSSSPX
DSMVFPWSPSPEALFKCPFCETPFVSKGAYRNHLSKMHFVKDPSVMMMMD
PASIMALAAGIPSGFFPPHHSGGGSGNVLGGLSGMQGPPVSTSPDFEENS
TSKFEKYSQLAKQLSNQRKPLSSPA
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mRNA from alignment at LSalAtl2s49:363225..366513+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008257-704104 ID=EMLSAT00000008257-704104|Name=EMLSAT00000008257|organism=Lepeophtheirus salmonis|type=mRNA|length=3289bp|location=Sequence derived from alignment at LSalAtl2s49:363225..366513+ (Lepeophtheirus salmonis)
CGGCCCTGTTATACATTTCAATAGAGGGAGTCCAAAAACACCTTCTACTT CTTTCACACTAAATCATTCACAATATTATCATCAAAATCTTTTTCTATGA TCGTTGTTGCTGTTTTAATTCCTTCTATTTTTATATTTTGTTATCATCAC CAAAAAAAAAATAATAATATTCATAACCCAACTCATTAACTAAGTGAAAA AATCAGAGACTTTTATCAAATCAATTATTTGTTTAGTTCATAAAAAATCA TACAACTCCAATCATCATCATACCCCAAGGAATTATCCTGAGGCTCACAA TGGGACGAAGAAAGCAGTTTTGTCCACAAAAGACCGGTATACTTGAAGGT AGGGAAAATGCATATTTAATATTATTAACTTCAATATCCCTTATTAAACA AGAGAAATAATTATTTTTAAAACTACGTTTCTTGAATGACGTCTTCATTT GTTGATGAATGATATGAAATATCTATATGTAGGCATTTCATTTCACAATG GCTGTTGTAAGATACTTAGTTATAATATATTATTATTATTATTATTTGAA AAGAGGAGAGTGATTTTCTTTCTCTCCTCTATGTAATTTGATTGATTGAC AAGTGTCAAAACAAGCTCATTTTTCTTCTTTTTCAAATATTTATTTTATT AAAATCTCAAATTCATTAACCCAATGATTTATATGTTATTATACATGCAT ATAATATATTATATAAATGAATTTAGGGCCATAAATACAGTCATTTGTTT GGTCAATATTAAGCATCCTAACTTATATTTACAATTTTTGCTACAGCATT TGAAAACACCACAAAATCAAAAACAGAGGACGATGAAGAGAGTGAAGCAG ACTCAAATCCCCATAACAAAATCAAGGAAGAGGACGAGGAAGAAGATGAA CAATCTCTTTTTGAATCTCCTACTATATCAGCTTTACACAAGAGGTATGA TAATATGCTTTAAATGACTCTGTTGTATCTATTTAATTAATGTATTCTTT ATAACCAGGACTCTAGAAGGAGACGAAGGTGAAGAAAAGGATCAAAAAGA CCCTTCTCCCAACAGACTTCTATCTCCTTTCGGAGTTTCTCAGCCCCACG ATTTTGCAAGTACACTCCTTGCTGCTCAACAGACCCTACTTAATCCAGCT GCCTTTCTCTCACTCAATCCATCATCCCTCTATGCAGTACAACTTGCTCA ACTTCAAGCAGCTCAACTCCTATCACAGCAACCTCCGCTCAAACGAAAAC TTCTTGAACAAGAAGACTCCACCTCCCCACTTGATCTCTCTGGCCCCTCT TCCAAATTAGGAGGGGTGGAACAGCTTCATCATCACCATGTCTTGTCTTC TCATCATGCGTTACAGGATGCTATGCAAATCCATGCTGCCGCAGGTCTTC CTTCTCCACCTAAAAGGCCCTCCTTTGAATCGTCATCACCTCTGGATAAG ATGACCGATATGACCAAAGGAAAGCAGAGACATTCTGCATGGCAATCCCA GTGGATCAATCGCGGAGAAGAAAATGCCAAAGATATATTCAAATGCACAT GGTGTAAAGAGTGTTTCCATTCATTTCAGGCCCTTACTCATCATATGAAA GAAACCAAGCATTTTGGAGGCTCTCTTCCACCTTCCTCATCACCAGGTCC TTTCAAGAACACCTCATCTTCGCCCTCGCTCAGTAGTGGACCTAGTAGCA TTACGGCTCTTCCACAGATCTCACCTCCAAAATCTAATCCTCCTCCTAAC ACCAATCCCTCTGCCTCTTCCCCCTTGTTGGACACAAATTCATCTTATGA GATGAATTGTTCTTCAGGACCTAAGAAAAGAGACATACTCAAAGAACAGC TCCCCATTCCAAGAAAACTTGTCAGAGGACAGGATGTATGGCTTGGAAAG GGGGAAGAGCAAACGCGGAACATTTTAAAATGCATGTGGTGCGGAGAGAG TTTCCGATCTCTTGAGGTCATGACTAAGCATATGCAAGAAACAAAACACT ATACCAAAGTGATATCCCAGGATCAAATATCCTCTTGGAAAAGTAATAAT CAAGTCTCTAATGGATCCTCCTCTTCTTCTGTTCCTCCTGCAGTCACATC CCCATCCAAGGACAATAAAGATCAACCCATGAATTCAATTCTCTCCTGCA AAGTCTGTGAGACGAGTTTTCAAACTCTAAAGGATTTAAGCGATCATATG ATAAAGAATAACCATTGTATCAACTCTCCAAAATCTCCATTAAAAAATTC TTCGCCTCCAGCGTCGGTCACCTCAGTTAGCAATAATAATAATAATTTCA CATTTCCACCAAAGGAAAAGAGAAAGAAGTCCTTACCTGTCAAGAAATTA TTAGAACTAGAGCGCTCCTACGAGAAGGGAACTACGATGAAATTCCCGTG CGATAAGTGCGGAATCTCCTTTCCATTCCACTTGTTTGCGGAACACATAC GCAATTGTAATGGACTTGTCTCTAGGGCATCCTCTTCTCCCGAGCAAAAA AGGTCAGAGTCCCTTTCTCCTCCAACAATCGCACCTGTTTTAACGAATAG GATGTCCTCAACCCGTAAATCTCATGACGGTGGAGATAGCAACATTTTGG GTTCATTGGAGGAGATGGTGTCAGGGAATTTTAAGGGATTACCTAGAGAT GATGTTGTCATTCCTGTAATAAAGGAGGGTCAGGATGAGGACATTGCAGT GGACGAAGAGGAGCAAGTTGTTCTCCATCATATTAAGTCATCTCCCTCCT CAGTCAAATCCAAAGAAAACAGTCATTCTAATAAAAACCCGCTGGAGGCA TTGCAAATGCTCTGCGACAAGAATGAGAAGCAGACTCAAAACTTTTACGG AGGKGGAGGAGGAACTCCTACTGGAGGGAATCCTCATATGCTGGGATCAT CTTCTCCAMCCGACTCAATGGTATTCCCCTGGTCTCCCTCTCCTGAGGCT CTGTTTAAATGTCCTTTTTGCGAAACACCTTTTGTGTCAAAAGGTGCTTA CCGAAATCATTTAAGTAAAATGCATTTTGTGAAGGATCCATCCGTGATGA TGATGATGGATCCAGCTTCCATCATGGCTCTTGCTGCAGGGATTCCCTCG GGATTCTTTCCTCCTCATCACAGTGGTGGTGGAAGTGGTAACGTTTTGGG GGGACTAAGTGGAATGCAAGGTCCACCAGTCTCTACATCTCCAGATTTTG AAGAAAACTCCACATCCAAATTTGAAAAATATTCCCAATTAGCCAAACAG CTTTCCAACCAAAGGAAGCCTCTCTCGTCACCTGCATGA
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