EMLSAT00000008384, EMLSAT00000008384-704231 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008384
Unique NameEMLSAT00000008384-704231
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s512supercontigLSalAtl2s512:319189..321924 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008384 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008384EMLSAG00000008384-691150Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000037221EMLSAE00000037221-746149Lepeophtheirus salmonisexon
EMLSAE00000037222EMLSAE00000037222-746150Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776322auto776322Lepeophtheirus salmonispolypeptide
EMLSAP00000008384EMLSAP00000008384Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008384

>EMLSAP00000008384 ID=EMLSAP00000008384|Name=EMLSAP00000008384|organism=Lepeophtheirus salmonis|type=polypeptide|length=333bp
MRSYHTNLXXXXXXXVKSVKGQXTDFKGHQGPVRSVDFNSDGSKXLSASD
DKSIKLWTVEKQRFIKSFNGHNNWVRSAKWSXBQKXIASVSDDRSLKLFD
ENTGKEIHSFNEPGRGFGQCLSFHPSGSCIAIGTSDKKVKMYDIRTMKLH
QSYTSHTGPVNQVAFHPSGCYLLSCSSDGFVKMFDIIEAQPVYGLTGHKE
EVTAIEFSPKGEYFSSGGSDNAVFVWKSNIDSSSSNSLKDKNVKDGNTVR
ALSELDLNKSDYENIEKQSILKKNPLEQDVDTTTLKAEINRLNQKVETLT
QTIFYMEKRMTIVEEQLKLYTDPSIGESETCEY
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mRNA from alignment at LSalAtl2s512:319189..321924+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008384-704231 ID=EMLSAT00000008384-704231|Name=EMLSAT00000008384|organism=Lepeophtheirus salmonis|type=mRNA|length=2736bp|location=Sequence derived from alignment at LSalAtl2s512:319189..321924+ (Lepeophtheirus salmonis)
ATGAGGTCACTCATCTATTCGCGAGGGAAATTCAGTTACATCATAAAATC CATTGAATCAGTTTCTACTTCTCATCAGTGTTGAGTGTTCGCTAACCCAT AGACATCCATACCAAATCTACAAGTAAACTTTTTTATCAGTCCTGCACAG TTACGAAGAAAATGGAGGAGCCCCAATTAGCTCATCAGTTTCGGGGGTTG AAAGGAGGCGTCACGGGATTGAGCTTCCATCCCCACATCAAACAAGTGGC TGCCTCATCCCTGGACTCCAATATCATGGTCTGGAACTTTTCATCTGAAA ACAATTTGAAGGCTTTGAGGTACGTCTATGGAGACCTTGGTTTAGAATCT TGCCGCACGTCATACTTTCTCTTTCTATCTGAAAAATGGAGACAGCCAAC GCGGAAACTTGAAATTCAATCCTCCCAACCTCCTAATTTTTAGGAAATAA CATTTCTATTTTTCGAATTCCTATTCGAGTTATTCCCGAAAATTACCACT TTGAAGGATCTTGGGAAGGTGGAGTAGGTTGTGAATTTGTTTCTCCGAGT CCCCTTTTCCCCTCGATACTCCATAAGAGACGAACTTACAACCTCTTCCA CAAAATACGACCTTCCCATCTACTTTAAATATCTTCCAAAGGGGTAATTA TCTTAATAATGCGTTCTCATATGATGTAGGCAAATTCGGGGGCCTCAACG AACAAGTTAAATAAGAATNNNAAATACTCTTTTTTTTYATTCATATTAAT GACAATAGTCCAAATAGGACCAACAAATAAAAAGACATAACCCTTTATAC TCTATTAAAAATGTATCCCTCTATTGCCGAGTTGCATTATGTCAGACGCC AAAATATCTTCAAAATAGGTTATTACATCACTATAAATCTTATTAAATCA AGGTTAATAGAATTACAAGGATAAACCATGATGTAATAGAGCTTGCTAGA ATTTTCAATTTGAGGTATCGTACCGACTACTGGGCAGGAAAGACCGATTT TGACAAAATACGCTACCACTCATAGACTATGACGTCAATATTTAAAAGCG TGGTGGAAGTAAAACGTCAGTCGTTCACGCGATATAGTATTTATATTAAC CTTAATCATTATAAYMGAAAGAAYATGGTATTTTTCTACAATTATCCTAC TTTTCTTGTCCCTAATTGGTCCAAAAACAGTTCAATAATTGTTCAAATTT TTACGTTTAATGGAGATTTTCAGTACATGTTACTTTGATTATTTTCAAAT ATCAGTGTTTATCATTGACATCAAGTAGAATTCAACGCAGGTCTGAAGTA TTTTTAATGCAGAAATCCATTTGAGGGAGTTTAGTCAAGATTTATTGGAA ATTTATCTATTTTATGTAGACTAAGTGTCCCTAAAATGACGTCTCCTTCA ATTACGATAGAATTTATTTAGTAGAAACGCTTTATAGCTCGAAAGATTCG AGATCCCACTCCTACTTCAATAATATATAATTTGCTTAGCAAAGTTAGTG CTTTATAACTAAAAGGTTGTGATCAATGAATATCAATTTGCTGTCTCCAA TTTCCAGATAGAAGGAGAAAATATAACGTTTGAGCAAAATTATAAGCCAT ACTACTAAAATCAATTCATAAAGTAATATTTACTAATTCAATTATAATTT ACTACTTACTAGATMCTCTGGCCACACTGATGCCGTCCTCGACATTCAAT ATTCCCCTTCTGGAAGTCTCCTTGCCTCTTCTTCCAAAGATCGTACCATA CGAATTTGNNNNNNNNNNNNNNNNNNNTAGTTAAGTCCGTCAAGGGGCAG KCCACAGATTTCAAAGGTCATCAAGGACCCGTTCGCTCCGTGGATTTCAA CAGTGACGGCTCSAAAAWCCTAAGTGCCTCTGATGATAAATCCATCAAGT TATGGACTGTAGAAAAGCAAAGATTCATCAAATCATTTAATGGCCATAAC AATTGGGTACGCTCTGCCAAGTGGAGTCSTRATCAAAAAWTGATTGCTTC TGTGTCAGACGACAGATCTCTTAAATTATTTGACGAAAATACCGGAAAAG AGATCCATTCCTTCAATGAACCTGGTAGGGGTTTTGGACAGTGTTTAAGC TTTCATCCCAGTGGGTCCTGTATTGCTATTGGGACTTCAGACAAGAAAGT GAAGATGTATGACATTCGTACGATGAAACTTCATCAAAGCTACACCTCCC ATACAGGACCTGTTAATCAAGTTGCCTTCCATCCCTCTGGATGCTATTTA TTGTCATGTTCCTCTGACGGATTCGTTAAAATGTTTGATATAATTGAGGC ACAGCCGGTATATGGATTGACAGGACATAAAGAAGAAGTCACTGCCATAG AATTTTCACCAAAGGGAGAATACTTTTCCTCGGGAGGCTCGGACAACGCT GTTTTTGTTTGGAAATCTAATATTGACTCCTCATCATCCAATTCTCTAAA AGATAAGAATGTGAAAGATGGAAATACTGTTAGAGCTCTTTCAGAGCTAG ATCTGAATAAAAGTGATTATGAAAACATTGAAAAACAGTCCATACTCAAG AAAAATCCACTGGAACAAGATGTTGATACTACAACTCTCAAAGCCGAAAT TAATAGACTTAATCAAAAAGTGGAAACTTTAACACAGACTATTTTCTACA TGGAGAAAAGAATGACCATTGTTGAGGAGCAGCTGAAGTTGTATACTGAT CCTAGTATTGGGGAATCAGAGACTTGTGAATACTAA
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