EMLSAT00000008386, EMLSAT00000008386-704233 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008386
Unique NameEMLSAT00000008386-704233
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s512supercontigLSalAtl2s512:358979..361723 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008386 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008386EMLSAG00000008386-691152Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000037225EMLSAE00000037225-746153Lepeophtheirus salmonisexon
EMLSAE00000037226EMLSAE00000037226-746154Lepeophtheirus salmonisexon
EMLSAE00000037227EMLSAE00000037227-746155Lepeophtheirus salmonisexon
EMLSAE00000037228EMLSAE00000037228-746156Lepeophtheirus salmonisexon
EMLSAE00000037229EMLSAE00000037229-746157Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776840auto776840Lepeophtheirus salmonispolypeptide
EMLSAP00000008386EMLSAP00000008386Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008386

>EMLSAP00000008386 ID=EMLSAP00000008386|Name=EMLSAP00000008386|organism=Lepeophtheirus salmonis|type=polypeptide|length=263bp
MISLYVGIGFTLIRTISHRQILVAPNEWKLSDATIKLKKLREFLQEEYSH
NKNHIQKESTTEEPSSSNKISVDELKKLKIIGNKRFLLCEIRDSKEYLKN
HVNWEESLNIPPNRITSSMQLIDPFRYQPEYLEYLFIMDKNSKNFEENIG
LINFRQLLSKWDWKGTVCPQLFLCEGGFETFSNVLPSDTTMKSSLEVSTY
TIVNEDATSCSELNRSFIETPPPTPPLNCNSPAFFSGAISLSEKKRPENN
SLSSNCSLPTAIP
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mRNA from alignment at LSalAtl2s512:358979..361723+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008386-704233 ID=EMLSAT00000008386-704233|Name=EMLSAT00000008386|organism=Lepeophtheirus salmonis|type=mRNA|length=2745bp|location=Sequence derived from alignment at LSalAtl2s512:358979..361723+ (Lepeophtheirus salmonis)
ATGATATCTCTCTACGTAGGAATTGGGTTCACTCTGATAAGGAGTTATTT
CATAATCATCAGCACTTTGTTCATCATGGACATTAGTTACTTCTTTGATT
TTTTTTGTTATAGCTATTAGGTAAATTATGTAAATTTTCGCTATAGGAAA
AATAGGAATTAGGAACACTTGTTACGTACTCCCAAATATAAGACGCATTG
CTGAGATGGAAGAAAAAAAGTATCTTGTCAAGCTATAGGCAGTAGAAAAG
AAAAGATAAACATTTTATTGGAGGAGATATTTAAAGAATTAGGCCAATGA
CAGGAGGTTATTTTTTATTTGAAAAAAGTTTCATAAGTAGCAGCACTTAT
TGTTCTCTTATTATAATAATATTAATTAACTACTTAGCCATCGTCAGATT
CTAGTGGCCCCGAATGAGTGGAAATTGAGTGTATTTGGGGAATGCAATGT
TGCTTTTAAAATATAGCTCCATTAAAGAGATTAATGAGGAAGCTTCTCGC
TGTCTAAAAGGGTTACAGGGAAATCCGAAAGGATTGTGTCGCGAAATCAA
GAAATGGATGAATGAGGGACACGAATCCATGAAGGAGAATCGCAAAGAAG
AGGCATATACATACTTCTACAGATCCATGGGTATAAATTATAATGGATAT
TCCATTAATTATCACTATTATCTCTTTTCCTCTTTCCTCTCACTATTTTA
TTGTTGTAAATTCTACTAATTACTCACGAATTCTTTTCTTTTCCCCCTTC
CTCCCTTTAGAATTGTTCAAACGACTCAAGAAGATACAAGCATTTATAAG
GAACACGCATTTCTACTACGGAATGATAGGCGGAAAAATGACACTCAATG
TTGGTCATGTTTAGTTATAGAGCGTTTACGCAATACATTGTCACTATTGT
TGATGCCCGCCATTTTGGGGGCCTAAACAATCAAGTTGTACAACAATAAA
TCCCCTTTTTTATAAATATGAAGGAAAATAGTCAATTATTGGATGTCAAA
ATGGGAAACAAATAAAAAGACATAAACCTTTATCCTGTATGAAAAATCTA
TCCTTCTATTACAGAGTCAGACCTAATATCTATTCAAAATATGTTGTTAC
ATCGTTATATAATTATATTGACAAATTCTAGATACAAATTAACTATTACA
ATGGAAAAAATAGGATCTTATTCTCTAATTATCCTACTTTTCTCGTCCCA
AATCGATCAAAAACATAAAAAAATGTACAAATTTAGACATTTCATAGGGA
TTTTTAGTATATAATACATTGATTATATTCAAATTTCACTGTATATCATT
GGGATCAAGTAGTAATCAATGCAGATTTTAAGTCTTTTTATATTCTTGAA
AGACATTCAATGAAGTTTAATCAAGAATTGTCTATTTTATATAGTAAAAA
TGTTTAGTTTGTGCCCCCAAGGTGGCGGCTCCTTCAATTATCATGCAATT
TATTACGACAATGAAAACGCTCTATATTATTTGTTATAGTTGTGCATTAT
GATTTCTTCAAGTATCATAATACACTAGTGAATTTAATATCTTTGCATAA
AGTAAATACTACTACAAATGTTTCCATTCTCTTTATAGGATGCCACTATC
AAACTTAAAAAATTAAGAGAATTTTTGCAGGAGGAGTATAGTCACAATAA
AAATCATATTCAGAAAGAATCCACAACGGAAGAGCCGAGCTCAAGTAACA
AGATAAGCGTAGATGAATTGAAAAAATTGAAAATTATCGGTAATAAACGT
TTTCTGCTATGTGAAATTCGAGATTCCAAGGAATACTTGAAAAATCATGT
CAACTGGGAGGAGAGTCTAAATATTCCTCCTAATCGTATAACTTCCAGCA
TGCAGCTAATAGATCCATTTCGTTATCAGCCTGAATATCTAGAATATTTA
TTTATAATGGACAAAAATAGCAAGAATTTTGAGGAAAATATAGGTTTAAT
AAATTTTAGACAGCTACTCTCTAAGTGGGATTGGAAAGGAACTGTTTGTC
CTCAACTTTTTTTGTGCGAAGGAGGATTTGAAACGTTCTCTAACGTTTTA
CCCTCTGACACGACAATGAAGTCATCCTTAGAGGTTTCTACTTATACAAT
TGTTAATGAAGACGCCACATCATGCTCTGAACTCAATCGTAGTTTCATTG
AAACACCTCCTCCAACTCCTCCCTTAAATTGTAATAGTCCGGCATTTTTC
TCTGGAGCAATATCGCTCTCTGAAAAGAAACGACCTGAAAATAATTCTTT
GTCTTCCAATTGCTCTGTTTGTAKACTTAATCRAGGTATGATACAAGAAG
TACAAAAAAATGAATCGGATACTTTAACTCCTAATGATCTCATCGACTTA
AATATTTTCCATCATGAGAATGAAAGACTTGCTAGTGATCATATGATATG
CTCCCATGAGAGTTGTGAACWTAATCAAAACGCTGAAAGAATTAAGAACT
ATATAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNAAGTTAGTAGAAAACTAAATATAATTAGAAAATC
AAGAGAACAAATCTTATAATTACAATGATGGGACGATCATCAGAGGAAAA
GTGCTAATGAAAAGTTATATTGTCTTGAAGTTAATTTTATGCTTTAAYAC
AAATCTATGAAAAAAATATATATATTATGATATTGAACTCATATTTGTAA
GAATTATATATTAAATTATTTTAGCTCCCAACCGCCATACCATGA
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