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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s52 | supercontig | LSalAtl2s52:599814..605904 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000008592 >EMLSAP00000008592 ID=EMLSAP00000008592|Name=EMLSAP00000008592|organism=Lepeophtheirus salmonis|type=polypeptide|length=1575bp
MMSGLLLRRGLSSAVKGMSSNLWSLGKLNHVAIATKDLQKSINFYKDVLG
ANVRLLWSVGRTSTSLNPHFKMKIIVGLLVLVFFIYFFNWCSDNNTDDTL
LFNEEVAFKRLASKTPYEFVRNYHENNITSSYSGCEYIHSWFLIRHGTRY
PGQKNMFQITHGLEEIKKIYPHLLGDFPSILHLKEYLFSHLHPEGEKEMI
ELAERYKILFPKLFSDEHDFQKYKFFTTQTQRTFRSKYFFTIGLYNRQVA
ARIPHDTSMEKVLRFYKHCSKWNNNYKKIMTRKNKMFEESDLFKKNVLES
FSMRHKLENIMSAQNITVLYNVCRYGQAWNPQVFFEPWCPLFTPEEMSIL
EYREDVLDYWEDGIESEINYRPACVLITHLLESLKDPLKATVNFSHSRAI
RKFLVLLKYLDDKVALDIDNYLLFKNSRKWRSSFVYPFGANIAIVERNCQ
SPNISKTIGLFLNENLIQIPGCNEKCEIDGILSPLESPKLLRQNRESVFN
RLSVGNQSNSSFTSIDFCSIQVLPKNEVEAYTFLRDISSNYKKFQNLKTA
LEKSCFYSNFNNTSFSPINQNSILHLAVILGDTYLLSTLLTFSKTSNLDI
NLQNAKGDTPLHLAVDYNERGAVEQLLKAKSNTEILNNLGYTPVQIATLK
QNAPILQILIRQGEVNRRVLCPNTNETLIHLSCRTLLMRKLNLQEENERK
IQCVSESKDITSRNLSCDSVDISLLGGHKSQEAKLMKHGFSILRSLLHDF
TYCPDLIEVEDILETSPGLILHYFCILDFQEGVKKLFHEPFVVNPNVTNK
NGFSALWVASWSNHIDCAHIVLKQDGDPNFACSVNGFTPLHLAVLNFHEN
RVNETCDFIDHLIQCGANLKKVNSCGETAAHLAVQTANFRVISKFVSALG
PELLELKESEDSECSFFMYAVGRLDEKSIYQLITMGAPLISSNVWGESLS
GKIVILSDSKLPLQEAVAGGNSDNYFNALLRCSLMDIKDRIVDEKTYFVF
LCCHLIAAXRDXRXXVIRMIFQNIEDIDMLHSLLIFKDTSSVDDTFTKTP
LQWAVENSDRLCTTEILHQEYQCHKLSKEMGLRCLRNQLKGDELLTWTIE
TFTVFYDRTVAQKCVFPLMALVPVFFSIFNFTYDYYSDISLTLQYFSDSS
FRNSFLVDDFNATLKNNHCRNFTPTPHQFFIAFAVNLICITAPLLVFFFM
CVWEIQSALHSNGFCCPDIMAMFLSLFFTPFFVLYVAGRQVYYKFRHARA
KQKNLFRDQLRKSEFFWGITRSAEAGLESCGQLILQIWLLSFNFYSLLGL
SFEQFLKKSLHGVVLILSFSINEADDIEQSLGKVFLSVISLVFSVSSGYR
MLKRGSLRMNNAVFIYLSTFFQVLARICGVSLFFVGVRSFSPIIPLLLLA
HFALILVLKLTFESDANTFRSLSSFLVSLLTVFASSMVYVRITPLTHRWQ
YEHRSTFVVQFLFFLIVFIENIILSCTPILFYNREDTLLSCLSPNQFNIY
VFFIILLSTCAWFCHIFYYKCMGHPWSDINGPGRDSLKKEFHVYFQVFGK
EKLLIFNYGKSKKTKRLSTKDVDFI back to topmRNA from alignment at LSalAtl2s52:599814..605904- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000008592-704439 ID=EMLSAT00000008592-704439|Name=EMLSAT00000008592|organism=Lepeophtheirus salmonis|type=mRNA|length=6091bp|location=Sequence derived from alignment at LSalAtl2s52:599814..605904- (Lepeophtheirus salmonis)
ATGATGAGTGGTCTGTTGTTAAGGAGAGGTCTATCCTCAGCTGTCAAGGG
AATGAGTTCCAATTTGTGGAGTTTGGGGAAATTGAATCATGTGGCAATCG
CCACTAAGGATTTACAAAAATCCATCAATTTCTATAAAGATGTTTTRGGA
GCCAATGTTAGGTAGTGTGTTGATCTAAATCATTCGCTGATCCACTCTGT
AACTTAAAAAAACTAACAACTCCCTCCCTCCTCTTAATAATAATTAATAT
ACTAGCTTAAACTTTATTCTGAGTTGAATTCTCCAATTCCATTGACAATT
TATATATAATATGTTGACAAGTTGTAACTTGTCTAAACAGATTCACAAGT
TATTTTAATAAACAATTACTAATGAATGCTATCATTTCATTTTGATGTAT
TAAAATTAGATATTTTATATTGATTATGTGTTTACGAGAAAGATAACAAA
TTGAACTTTACAATGGCCCATGGAATACTTATCAATTAATCATCTCATAA
AAATAGTCAAAAATAGACTATTAATATTATCAACCATACATGGAATATTC
AATTATTCCTCAACCCGTGATCTGTCAATCCTTCATTTAAAATTATTCAT
CTCATTTTTTGGTTACAACTTGTACACGACTTATGCCTTTGAAATGAAGA
ATAAAGTAATATTTTTGATATATCAATTAACATCCGGTTACATGTAGTGA
ATTATTTAAGAAATAATTATGTATTCATTATTTTTTTGTATTCTATTTAA
GTTTAACAAACGTCATTTTTAAAAAAAATAGTTCTCCAGATAATCTGAAG
GACCACGGAGTTACTGTTGTCTTTGTGGAATTAGAGAACACAAAAATAGA
GTTATTACACCCTTTGGGTGATCAATCTCCAATTAAGGCATTCCTTGATA
AAAACGTGGACGGTGGAATTCATCATGTTTGTATTGAAGTGGATAATATA
GAGGAAGCTGTTAAGTACGKAGKGATCATCCCTTAATTAATCTATTGTGT
ACAGTACATTGTCATTATATCAATATAATTAAATCATTATACAATTGGAT
TTTTTCTATAGGACTGTCAAAGAGAAAAATATTCGTTGTTTGGCAAAGGA
TACTAAAATTGGAGCACATGGAAAGCCTGTTATGTTTCTTCACCCCAAAG
ACTGCTCTGGAGTGTTGGTAGAACTTCAACAAGCTTAAATCCTCATTTTA
AAATGAAGATTATTGTAGGACTTTTGGTATTAGTGTTTTTCATCTATTTT
TTTAATTGGTGCTCGGATAATAATACTGATGATACCTTATTATTCAACGA
AGAAGTTGCGTTTAAAAGATTGGCATCGAAAACTCCATATGAATTTGTTC
GGAATTATCACGAAAATAATATCACGTCTTCATATTCCGGGTGTGAATAC
ATTCATTCATGGTTCCTTATCCGCCATGGTACAAGATATCCTGGACAAAA
AAATATGTTTCAAATTACTCATGGCTTAGAAGAGATAAAAAAGATATATC
CTCATTTATTAGGAGACTTTCCAAGTATCTTGCACTTGAAAGAATATCTA
TTCAGCCATTTACATCCTGAAGGAGAAAAAGAAATGATCGAGTTAGCAGA
GCGTTATAAAATTCTATTCCCGAAATTATTTTCTGATGAACATGATTTTC
AAAAGTATAAATTTTTTACAACACAAACCCAGCGTACATTTCGTTCTAAA
TATTTCTTTACAATTGGCCTATATAATAGACAAGTTGCAGCCCGTATACC
GCATGATACAAGTATGGAGAAAGTCTTAAGATTTTATAAACATTGCTCAA
AGTGGAATAATAACTATAAAAAAATAATGACTCGTAAGAACAAAATGTTT
GAAGAATCGGATTTGTTTAAAAAAAATGTTTTAGAATCATTTTCTATGCG
ACATAAATTAGAAAACATTATGAGTGCTCAAAACATTACTGTATTGTATA
ATGTATGTCGATATGGTCAGGCCTGGAATCCTCAGGTTTTCTTCGAACCC
TGGTGTCCTTTATTTACTCCTGAAGAGATGTCTATTTTAGAATATCGGGA
GGATGTTCTTGACTATTGGGAAGATGGAATTGAATCTGAAATTAATTATA
GACCTGCTTGTGTTTTAATTACTCATCTTCTCGAAAGCTTAAAGGATCCT
TTGAAAGCTACTGTGAATTTTTCCCACTCACGAGCTATCAGGAAATTTTT
GGTTCTCCTCAAATACCTGGATGACAAAGTTGCATTGGATATTGATAATT
ATCTCCTCTTCAAAAACAGTCGGAAATGGAGAAGTTCTTTCGTTTATCCC
TTTGGTGCTAATATAGCTATTGTGGAGCGTAATTGTCAATCTCCAAACAT
CTCAAAAACTATTGGACTTTTTTTAAATGAAAACTTGATACAAATACCTG
GATGCAATGAAAAGTGGTGTGATTATTATAAATTCATTGAAATTATGAGT
CAATTGAATAAAAACTGTGATTTATCAGCGTTCTGTGATTCTTGACACCT
TCTTTTTTTAATCACGAGTTTAAAATATATTCATTTTATTAGGTTTCGTA
TGTATTGAAGAAGATGAATGGTCAGGAATATGAAATGGTTCAATAAGATG
ACACTTCTATTAGTGAAATTGATGGGATTTTATCTCCATTGGAGAGTCCA
AAGTTATTACGACAAAATCGAGAATCTGTTTTCAATCGTCTTTCGGTTGG
GAATCAATCCAATTCTTCATTTACGAGTATAGACTTTTGCTCGATACAGG
TGAGTTCAATTTTTTTTTTTTTTTATGTGTGTATGCGTTTTTATCTTTTC
TTTATTCTTGTTTAAGGTTTTGCCTAAAAATGAGGTTGAAGCATATACTT
TTCTCAGGGATATTTCTTCCAATTATAAAAAGTTTCAAAATCTAAAAACG
GCGTTAGAAAAAAGCTGTTTTTATTCTAACTTTAATAACACATCATTTAG
TCCAATCAATCAAAACTCCATTCTCCATTTGGCTGTTATTCTGGGAGATA
CTTACTTACTTTCTACTTTACTCACATTTTCAAAGACATCAAACTTGGAC
ATTAATTTGCAGAACGCAAAAGGTGACACTCCTTTACATTTAGCTGTGGA
TTACAATGAACGAGGAGCAGTTGAGCAACTTTTAAAAGCCAAATCGAACA
CCGAAATATTAAATAATCTGGGATACACTCCTGTTCAGATTGCAACACTT
AAACAAAATGCTCCCATATTACAAATTTTAATTCGACAAGGAGAGGTGAA
TCGCCGAGTTTTGTGTCCGAATACGAATGAAACACTCATTCATTTATCAT
GTCGCACTCTTCTTATGAGAAAATTGAATTTGCAAGAGGAAAATGAAAGG
AAAATTCAGTGTGTTAGCGAATCTAAGGATATAACTTCCAGAAATTTAAG
TTGTGACAGTGTTGACATAAGTTTACTAGGGGGCCACAAAAGTCAAGAGG
CAAAGTTGATGAAGCATGGTTTTTCCATTTTGAGGAGTCTTCTCCATGAT
TTTACATACTGTCCGGATCTAATTGAAGTCGAGGATATATTAGAAACATC
TCCTGGCCTAATACTACATTATTTTTGCATATTAGATTTTCAAGAAGGTG
TCAAAAAGTTATTCCATGAACCCTTTGTCGTTAATCCCAATGTCACGAAT
AAGAACGGATTTTCTGCATTATGGGTTGCTTCCTGGAGCAATCACATTGA
TTGTGCACATATTGTTTTAAAGCAGGATGGTGATCCAAACTTTGCATGCT
CTGTAAATGGATTTACTCCACTACATTTAGCAGTTCTAAATTTTCACGAA
AATCGCGTCAACGAAACATGTGATTTCATTGATCATCTCATTCAATGCGG
AGCAAATTTGAAGAAAGTTAATTCTTGCGGAGAAACAGCTGCTCATTTAG
CTGTCCAGACTGCCAATTTTCGGGTAGAACAATTAAAGTTGTAGTTTACT
TGTATATGATTTTTATCATATTTTAGGTAATTTCGAAATTCGTATCAGCT
TTAGGCCCTGAGCTATTGGAACTGAAAGAAAGTGAGGACTCAGAATGCTC
CTTTTTTATGTATGCTGTTGGGCGACTTGATGAAAAGTCAATCTACCAGT
TGATAACAATGGGAGCTCCGCTGATAAGTTCCAATGTATGGGGTGAAAGT
TTGTCTGGGAAAATTGTCATATTGTCTGACTCAAAATTACCGTTACAAGA
AGCTGTTGCTGGAGGAAACAGTGAGTTCCAACCATTTTTAATTATATAAA
TATATAGCTAAACTTACTTTCTTCTAGGTGATAATTATTTTAATGCTTTA
CTTCGATGTAGTTTGATGGATATTAAGGATCGCATTGTTGATGAAAAAAC
TTATTTTGTGTTTTTATGTTGTCATTTGATTGCGGCTGSTMGAGACTTKC
GGKCTGRTGTTATTCGAATGATATTTCAAAACATTGAGGACATAGATATG
CTTCATTCTTTATTAATATTCAAGGATACTAGTAGCGTTGATGATACTTT
TACCAAAACCCCTCTTCAATGGGCAGTCGAGAATAGTGATCGTTTATGTA
CTACAGAAATCTTACATCAAGAATACCAATGTCACAAATTAAGTAAAGAA
ATGGGGCTTCGTTGTTTAAGGAATCAATTGAAAGGTGACGAGCTGCTCAC
GTGGACCATTGAAACATTTACTGTTTTCTACGACAGAACGGTTGCTCAAA
AATGTGTATTCCCCCTCATGGCTCTCGTCCCCGTATTTTTTTCCATTTTT
AATTTTACCTACGACTATTACTCTGATATAAGTTTAACGCTTCAGTATTT
TAGTGACTCTTCGTTTAGAAACTCTTTTCTTGTCGATGATTTCAATGCCA
CTCTGAAGAACAATCATTGCCGTAACTTTACACCTACCCCTCATCAATTT
TTCATAGCATTTGCCGTCAATTTAATTTGCATAACTGCTCCATTACTTGT
GTTTTTCTTCATGTGTGTATGGGAGATTCAATCGGCTTTACACTCAAATG
GGTTCTGCTGTCCTGATATAATGGCTATGTTTTTGTCATTATTTTTTACT
CCATTTTTCGTGCTCTACGTTGCTGGACGGCAAGTGTACTACAAATTTAG
ACACGCAAGAGCCAAGCAAAAAAATTTATTCAGAGATCAGCTACGCAAAA
GTGAATTTTTCTGGGGAATTACAAGAAGTGCTGAGGCTGGATTAGAGAGT
TGCGGACAGCTTATACTTCAAATTTGGCTCCTGTCCTTTAATTTTTACAG
CCTTTTAGGATTATCCTTTGAGCAATTTCTTAAAAAATCTCTTCATGGCG
TTGTTCTGATTCTCTCATTCTCAATCAATGAAGCAGATGACATAGAGCAG
AGTTTAGGAAAAGTTTTCCTATCCGTCATATCCTTGGTTTTTAGTGTTTC
CTCTGGTTATCGCATGTTGAAAAGGGGATCTCTTCGAATGAACAATGCAG
TTTTTATCTATCTTTCCACTTTTTTTCAAGTACTCGCAAGAATTTGCGGT
GTGAGTCTATTCTTTGTTGGGGTCCGTAGCTTTAGTCCCATCATTCCTCT
ACTCCTCCTTGCACATTTTGCATTGATCCTAGTACTAAAATTAACGTTTG
AGAGTGATGCCAATACCTTCCGTTCCCTTTCTTCCTTTTTAGTATCACTT
CTCACGGTGTTTGCTAGTAGTATGGTCTACGTCCGGATTACACCATTGAC
TCATAGATGGCAGTACGAGCATCGCAGTACTTTTGTCGTACAATTTCTAT
TTTTCTTGATTGTTTTTATCGAAAATATTATTCTCTCATGTACTCCAATT
CTATTTTACAATCGAGAAGACACACTTCTGAGCTGTCTTTCACCCAATCA
ATTTAACATCTACGTCTTCTTCATAATTTTGCTTTCAACATGTGCTTGGT
TTTGTCACATTTTCTATTATAAATGTATGGGTCATCCATGGTCAGATATC
AATGGCCCTGGAAGGGACTCTTTAAAGAAGGAGTTTCATGTGTATTTCCA
AGTTTTCGGCAAAGAGAAACTACTTATTTTTAACTATGGTAAATCAAAGA
AAACGAAGAGGCTCTCCACAAAAGACGTAGATTTTATTTAA back to top
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