EMLSAT00000008594, EMLSAT00000008594-704441 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008594
Unique NameEMLSAT00000008594-704441
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s52supercontigLSalAtl2s52:607033..607922 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008594 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008594EMLSAG00000008594-691360Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000038180EMLSAE00000038180-747108Lepeophtheirus salmonisexon
EMLSAE00000038181EMLSAE00000038181-747109Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778869auto778869Lepeophtheirus salmonispolypeptide
EMLSAP00000008594EMLSAP00000008594Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008594

>EMLSAP00000008594 ID=EMLSAP00000008594|Name=EMLSAP00000008594|organism=Lepeophtheirus salmonis|type=polypeptide|length=278bp
MPEQKLGFAENFMLSGVAAAVSKTAAAPIERVKLLVQNQHEMMKQGRLDK
PYSGVVDCTMRTLKSEGVISFWRGNLANVLRYFPTQALNFAFKDTIKGIF
KTAKDAPQTEKFAKNILSGGCAGSLSLTFVYSLDYARTRLANDAKTKDGK
REFSGLIDVYTKTVKSDGVQGLYRGFTISCVGIFIYRGMYFGLYDSIKPI
LLGSDAGLFASFLLGWLVTITSGLMSYPIDTIRRRMMMTSGQAVKYKGAM
DCGMQILKNEGFMSMMKGAGANILRGNI
back to top

mRNA from alignment at LSalAtl2s52:607033..607922-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008594-704441 ID=EMLSAT00000008594-704441|Name=EMLSAT00000008594|organism=Lepeophtheirus salmonis|type=mRNA|length=890bp|location=Sequence derived from alignment at LSalAtl2s52:607033..607922- (Lepeophtheirus salmonis)
ATGCCTGAACAAAAGTTGGGATTCGCTGAGAACTTCATGCTGTCTGGTGT
AGCCGCCGCCGTCTCTAAAACGGCCGCCGCACCYATTGAGCGTGTGAAGC
TTTTGGTGCAGAATCAGCATGAGATGATGAAGCAAGGTCGTTTGGATAAA
CCTTACAGCGGAGTGGTGGACTGCACCATGCGGACCCTCAAGAGTGAGGG
CGTGATCTCTTTCTGGAGAGGGAATTTGGCTAACGTGCTCCGCTACTTCC
CCACACAGGCCTTGAACTTTGCATTCAAGGACACGATCAAGGGCATCTTC
AAAACGGCCAAGGATGCTCCTCAGACGGAGAAGTTTGCCAAGAACATTCT
GTCCGGAGGCTGCGCCGGATCCTTGTCATTGACCTTTGTCTACTCACTGG
ATTATGCTAGAACGAGGTGCGATACTCACTCTGCTTTTCAAACCCCTATT
CTATTGTATTGCATTTCAGGTTGGCCAATGATGCCAAAACAAAGGACGGA
AAGCGAGAGTTTAGCGGTTTAATCGATGTCTACACCAAGACCGTGAAGTC
TGACGGTGTCCAGGGTCTTTACAGAGGGTTCACCATCTCCTGTGTGGGTA
TCTTCATCTATCGTGGTATGTACTTTGGTCTCTACGATTCCATCAAGCCC
ATCCTCTTGGGAAGTGACGCCGGTCTTTTCGCTTCCTTCCTCTTGGGTTG
GTTGGTCACCATTACTTCTGGACTCATGTCCTATCCTATTGATACCATCA
GACGAAGAATGATGATGACTTCTGGACAAGCTGTCAAGTACAAGGGAGCC
ATGGATTGTGGTATGCAAATCCTCAAGAACGAAGGATTCATGTCCATGAT
GAAGGGAGCTGGAGCTAACATTCTCAGAGGTAATATCTAA
back to top
Add to Basket