EMLSAT00000008608, EMLSAT00000008608-704455 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008608
Unique NameEMLSAT00000008608-704455
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s530supercontigLSalAtl2s530:448635..452449 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008608 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008608EMLSAG00000008608-691374Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000038219EMLSAE00000038219-747147Lepeophtheirus salmonisexon
EMLSAE00000038220EMLSAE00000038220-747148Lepeophtheirus salmonisexon
EMLSAE00000038221EMLSAE00000038221-747149Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777774auto777774Lepeophtheirus salmonispolypeptide
EMLSAP00000008608EMLSAP00000008608Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008608

>EMLSAP00000008608 ID=EMLSAP00000008608|Name=EMLSAP00000008608|organism=Lepeophtheirus salmonis|type=polypeptide|length=907bp
MNCVKCEEGRRRVVEGIFLKSPSFKEKEGGKEEEEDLSTSSFSKVLSSQE
NNSSEDYDMRGPTGLTATSSAIQHYPPQAAFYHPQSIPPNLSLPELQIMA
QRQQQQIESQQHLLVAKEQRLKYLKQQDFKHHQMASEYDRLRRLREKVEA
QELKLRKLRALRGQGEYTNNYQQHQSVTADLESIRSLFSEKEKELVLAVR
KVEELTRQLDDIRRGHIGNSVNQQQYAPQLMELERLRREXAYRRQLNEQQ
NNMISQQRAQLSMGQEEMSKIDNRISELQERLTRKRMINQQLANQINAAT
AAKQAQLKSMQQQHHHQPPPPPTHXHPMNNVNNNHNSNNNNSNSNNNNGI
LVMKGGAGGVPPNNNGRMNKPVSTVEPFNRQQXSXPPSNEDSKYKTLPFN
TKFQQNNDNATNNMNHLILPDHQGNYDNKPVGNVVPVFQNSNNNSGEYYG
SSMDPYGNSSSVLPKVKPALPPKPTSNLNEGGSSEEDTSITILKGGALPN
PTLSVSSHPAEEGTSVDDDDDEDDNYDRCSTTDNEDDRNGNRNHIRGNSN
HNVHISINRRIEMPPAFHFPEDQTPPSDLLGADMLHHGGGQQLLYQPRDV
ADNASLFPMMNRIYQEFDHLSSEEKNQVLQDQSGDSDPDNSNDHPIIITT
TPSLKTKKGNLKPKNAPKHNKRVSFDPLALLLDASLDGELDLVMKTAKEV
EDPSAANDEGITALHNAICAGHIDIVHFLVEFGCDVNAQDSDGWTPLHCA
ASCNNLAMVKFLVERGACVFATTLSDKETAAEKCEEEEEGFHGCSEYLYS
IQDKLGSSNGGVVYAVFDYVASQSDELNFKLNEKINVQKKIDENEMEWWW
CQNQEKQLGYVPRNYLGFYPRVKPQFKSKKEASSNEEKQSSSIDNNKISS
PLGRPEE
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mRNA from alignment at LSalAtl2s530:448635..452449+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008608-704455 ID=EMLSAT00000008608-704455|Name=EMLSAT00000008608|organism=Lepeophtheirus salmonis|type=mRNA|length=3815bp|location=Sequence derived from alignment at LSalAtl2s530:448635..452449+ (Lepeophtheirus salmonis)
TGAGAAAATGATGTTGCACTTAAGTCAAGCACAAAGAAGGAGTGAACTGT TCACTGAGGTAGCAGCTTACTTAGGCGTGCGTCCGCGTTATTCCCTCCTT TACTGACTTGATAGCATTGCAGTACACACAGACACAGAGTGTGTACGTCA AATACAAATAGAAGGAACAGACTACAAGCGGTTGGTGGTTCCTCCATCCA TTTCTCATCCTTCCTTACCTTAATTTTACCTTGAAAAGGGGGATTCATAA TACTTAATAGAATAATAGTAGAAAAGAGAAGAGATCCCGAAATAGATTGT GCATCTACTCTCTGGAGAGGAGCTCAAGGATCTTGATAAAGAAAGAAGTG AGAAAGGTAAATGAATGTTGATGGATGAATTGTGTGAAGTGTGAGGAGGG TAGAAGAAGAGTCGTTGAGGGTTAGTAAAGACTAGACTGTAGTAAGAGGG AGGGAGAAGGGAGGGAGMGAGTGCTTCTGAATCATCTCACATCTCATCCT AGAAGCAGGAGGAGGAGAAAGTCCGCGCTTCTGCTGAGCCTCGTCTCTTA CAGTTGCGTGTCTGGCAAATGGGAAATAGTGAATCTTGCTTCTCTCTTGG CTCCTCCGCCKTTTTATTCATAGTTGAGCTCTCAGTGATTGATTGAGAAA TGTGGCATCGGTGTCATGGATCTGGTTCCGTGCCTCATTGTGTCTCTGTG GATGTAGACGTGAAGGCCAACGTGTCCTGCAAGCCCAKCTCCACAGATTA TCTATGTACTCACTTCCTCCTCAACCCCAATTCAGCCCCATAACCTGATA ACACGTTTAACAGTCACTAACAATAGACTCTCCAGTATTTCCTTGTCCTT GTGTCACGCCCTCCCTCGGGACTCATAGGCTCTTATTTAATCTTTTCAGG CATCTTTCTAAAATCTCCCAGCTTCAAAGAGAAGGAGGGAGGCAAAGAGG AAGAAGAGGATCTGTCCACATCGTCTTTCTCTAAAGTGCTGTCATCTCAG GAAAATAATTCCTCCGAGGATTATGATATGAGGGGTCCGACTGGACTCAC TGCAACTTCCTCTGCCATTCAGCACTATCCTCCTCAGGCGGCATTTTATC ATCCTCAATCCATTCCTCCAAATCTCTCATTGCCTGAGCTTCAAATCATG GCTCAAAGGCAACAACAGCAGATTGAAAGTCAGCAACATCTCCTTGTAGC CAAGGAACAGAGGCTCAAATATCTTAAACAGCAAGATTTTAAGCATCATC AAATGGCTTCTGAATATGACAGACTACGACGTCTTAGAGAAAAGGTGAGG GAACACTTAGAAATGCTGTATTCTTGTTATAACATTCAAACATTGTACAT TGTCGATGTTTGGTCCTTTGTTAAAAGTGTCCTTTATATTTACTTATTTA TTATTTCATTAGGTTGAGGCTCAAGAACTGAAACTTCGAAAACTAAGAGC GCTAAGAGGACAAGGAGAGTATACCAATAACTATCAACAACATCAATCCG TAACAGCGGACCTAGAGTCAATTCGATCTCTATTTAGTGAAAAAGAGAAA GAACTTGTTCTGGCTGTACGCAAAGTTGAAGAATTAACACGACAGCTTGA TGACATACGACGTGGACACATTGGAAACTCCGTCAACCAGCAACAGTATG CKCCTCAGTTAATGGAGTTGGAACGTCTTCGACGAGAARTAGCCTATCGG AGACAATTGAATGAACAACAAAATAACATGATTTCACAACAAAGAGCTCA ACTCTCTATGGGACAAGAAGAAATGTCTAAGATTGATAATAGAATATCAG AACTCCAAGAGCGGCTAACGAGAAAACGAATGATTAACCAGCAGTTGGCG AATCAGATCAATGCTGCTACTGCTGCTAAGCAAGCACAGCTAAAATCTAT GCAGCAACAGCACCATCATCAACCCCCGCCACCTCCTACCCATCKCCATC CTATGAATAATGTTAATAACAACCACAATAGTAACAACAACAATTCCAAT AGCAACAACAACAATGGAATCTTAGTCATGAAAGGGGGAGCAGGAGGAGT ACCCCCTAACAACAATGGGCGAATGAATAAGCCCGTGTCAACAGTTGAAC CTTTTAATCGGCAGCAATKCTCCCAKCCRCCTTCCAATGAAGATTCCAAG TACAAGACACTTCCCTTCAATACTAAATTTCAACAAAATAATGATAATGC TACAAATAATATGAACCATCTGATTTTACCAGATCATCAAGGGAATTATG ATAATAAGCCCGTGGGCAATGTCGTTCCCGTATTTCAAAACTCAAACAAT AATAGCGGGGAGTACTATGGTTCGTCAATGGACCCTTATGGCAACTCATC TTCTGTTCTTCCTAAAGTAAAACCCGCTCTTCCTCCAAAACCTACTAGTA ATCTCAATGAAGGGGGTAGCAGTGAAGAAGATACCTCCATTACCATTCTC AAAGGCGGGGCTCTTCCTAATCCAACCTTATCTGTCTCTAGTCATCCAGC TGAAGAAGGGACTTCTGTGGATGATGACGATGATGAAGATGACAATTATG ATCGATGCAGTACGACGGATAACGAAGATGATAGAAATGGGAATCGTAAT CATATTCGTGGAAATTCCAATCATAATGTTCACATCAGTATTAATCGTCG AATTGAAATGCCTCCTGCCTTTCACTTCCCTGAAGATCAGACCCCTCCAT CTGATCTATTAGGTGCAGATATGCTTCATCACGGAGGAGGTCAACAACTC TTGTATCAACCGCGTGACGTTGCAGACAATGCATCCCTTTTCCCTATGAT GAATCGAATTTACCAGGAGTTTGATCATTTATCGTCAGAAGAGAAGAATC AAGTCCTACAGGATCAATCTGGTGACTCAGATCCAGATAACTCCAACGAT CATCCTATTATCATCACTACCACTCCAAGTTTAAAAACAAAGAAAGGCAA TTTGAAGCCCAAAAATGCTCCTAAACACAATAAACGTGTCAGTTTTGATC CTTTAGCTCTTCTTCTAGATGCATCCTTAGATGGAGAGTTGGATCTAGTT ATGAAAACTGCTAAAGAGGTTGAAGATCCTTCAGCCGCCAACGATGAAGG CATTACAGCTCTTCACAATGCCATATGCGCTGGTCATATCGATATTGTGC ATTTCTTAGTTGAATTTGGTTGTGATGTGAATGCTCAGGACTCTGATGGA TGGACTCCTCTTCATTGTGCCGCCTCTTGTAATAATCTAGCCATGGTCAA ATTTCTTGTTGAGAGAGGTGCTTGTGTCTTTGCAACGACTCTCTCTGACA AGGAAACTGCTGCAGAAAAATGTGAAGAAGAGGAGGAAGGCTTTCATGGT TGCTCCGAATATTTATACTCAATACAGGATAAACTCGGTTCTTCGAATGG AGGCGTTGTCTACGCTGTATTTGACTATGTTGCATCTCAATCAGATGAAC TTAATTTTAAACTAAACGAAAAAATCAATGTTCAAAAGAAAATAGATGAG AATGAAATGGAGTGGTGGTGGTGTCAAAACCAAGAAAAACAATTGGGTTA TGTTCCTCGAAACTACCTTGGATTTTACCCAAGGGTCAAACCTCAGTTTA AGAGTAAAAAAGAAGCATCTTCCAATGAAGAGAAACAGTCTTCTTCAATA GATAATAATAAAATATCATCACCATTGGGTAGACCTGAAGAATAACTTTA TAAGTTGTAAAATACACATACTTTATTTTATTATATAAATTTATATAATA TATATCCAGAATATTGTTATATATATATACCTATATATTATTATATTATA AATTACATCATGAAA
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