EMLSAT00000008648, EMLSAT00000008648-704495 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008648
Unique NameEMLSAT00000008648-704495
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s534supercontigLSalAtl2s534:254197..255488 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008648 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008648EMLSAG00000008648-691414Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000038360EMLSAE00000038360-747288Lepeophtheirus salmonisexon
EMLSAE00000038361EMLSAE00000038361-747289Lepeophtheirus salmonisexon
EMLSAE00000038362EMLSAE00000038362-747290Lepeophtheirus salmonisexon
EMLSAE00000038363EMLSAE00000038363-747291Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775366auto775366Lepeophtheirus salmonispolypeptide
EMLSAP00000008648EMLSAP00000008648Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008648

>EMLSAP00000008648 ID=EMLSAP00000008648|Name=EMLSAP00000008648|organism=Lepeophtheirus salmonis|type=polypeptide|length=158bp
MLMPKANLIKIYENLFNEGVMVAKKDVHAARHPNVEVPNLHVMKALNSLK
SRGYVKEQFAWRHYYWYLTNDGIQYLRDFLHLPPEIVPSTLKRHVKAEGR
PRAAASSRSYDKPSGAGDRDAYRRNTGSGVPSGDKTGAAGPGSAPMEFRG
GYGRGKPE
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mRNA from alignment at LSalAtl2s534:254197..255488+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008648-704495 ID=EMLSAT00000008648-704495|Name=EMLSAT00000008648|organism=Lepeophtheirus salmonis|type=mRNA|length=1292bp|location=Sequence derived from alignment at LSalAtl2s534:254197..255488+ (Lepeophtheirus salmonis)
TTAAATATGAACAAAACGTAGAGTGTATAAAATCTATTTGTCAATGTTAT
AGGGTTTAGATGCAGCTTCAATCTGATTTGTCAAAATTTGTTAGGATTGA
TAACATATACCTATTACTAAATTACCATTGAAGAATATATATTATTACAC
AATTTCTGCTGAGTTTTGTTTTGTTTTGGCTATAAAAAGGAATAGCCAGA
AGTTGTTTAAGCAATCAAATGGCAGCGCTGAAAATCTTCCTTTTCCGGTT
CGTCCCTCTCTTTGAAAGCTGGTAATTTTTTTCTTCTTAAATATTTTTAT
TCTTGAAATCCGTGATTACCTTCAGAATCCATAAGTTATTTATTTATTTA
CCCTCTTCATATTACAGTCAGGATGTTGATGCCCAAGGCTAACTTGATCA
AAATCTACGAAAACCTCTTTAATGAAGGTGTTATGGTGGCCAAAAAGGAC
GTTCATGCTGCCAGACATCCCAATGTTGAAGTACCCAATCTTCATGTCAT
GAAGGCCTTGAATGTAAGTTTCTTTATCTTGTTTTCAAGGCGTTTTTATT
CCAAAGGGTTGTTTTTCTTTTTTTAGTCTCTGAAATCTCGAGGATACGTA
AAGGAACAATTTGCCTGGAGACATTACTATTGGTATCTCACCAATGACGG
AATCCAATATCTCCGGGACTTCCTCCACCTTCCCCCAGAGATTGTACCAT
CAACTCTTAAGCGTCATGTTAAGGCTGAAGGTCGACCAAGAGCAGCTGCC
TCATCCAGATCATACGATAAACCATCTGGAGCGGGTGATAGAGATGCATA
CAGACGGAATACCGGAAGTGGAGTCCCCAGTGGGGACAAGACTGGAGCTG
CTGGCCCAGGATCTGCACCCATGGAATTCGTAAGTTGTTAACTATTTCCT
CACATTACTAGTGCTAGTGATGTAGAGATTAAGTAGTACTTGTTTTTTAT
CATTGATGTCATAACCTTACTTTGTTTATATTTATTTTTCCAGAGAGGAG
GATATGGCCGTGGTAAACCCGAATAAAGTGTGTTATGTTTCCGCATCGAA
ATACATAAAAAAAAATTATAAAACAAAAACGAATTCTCTGTGTACTTTTT
TTCTTCACCGTCTCGAAGGTTGAATATTATAATCTGTTAGTGATGTTCTA
CTGAAATTAAATAATTCATCTAGTCTTGGGTCTCAGCATCTACTAGTAGT
AGGTCATAAGTTCAATACTCTGAAGGTCATTCTATTAACGAGTAATCCTT
ATCAATGTACGTAACCTTTGTTATATCAGTTTTATGAGTCCA
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