EMLSAT00000008730, EMLSAT00000008730-704577 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008730
Unique NameEMLSAT00000008730-704577
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s542supercontigLSalAtl2s542:384504..387214 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008730 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008730EMLSAG00000008730-691496Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000038832EMLSAE00000038832-747760Lepeophtheirus salmonisexon
EMLSAE00000038833EMLSAE00000038833-747761Lepeophtheirus salmonisexon
EMLSAE00000038834EMLSAE00000038834-747762Lepeophtheirus salmonisexon
EMLSAE00000038835EMLSAE00000038835-747763Lepeophtheirus salmonisexon
EMLSAE00000038836EMLSAE00000038836-747764Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777125auto777125Lepeophtheirus salmonispolypeptide
EMLSAP00000008730EMLSAP00000008730Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008730

>EMLSAP00000008730 ID=EMLSAP00000008730|Name=EMLSAP00000008730|organism=Lepeophtheirus salmonis|type=polypeptide|length=182bp
MGNVFASLFKGLFGKREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG
FNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVXSNDRERI
GEARDELMRMLAEDELREAVLLIFANKQDLPNAMNAAEITDKLGLHSLRN
RNWYIQATCATSGDGLYEGLDWLSNQLKNANR
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mRNA from alignment at LSalAtl2s542:384504..387214+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008730-704577 ID=EMLSAT00000008730-704577|Name=EMLSAT00000008730|organism=Lepeophtheirus salmonis|type=mRNA|length=2711bp|location=Sequence derived from alignment at LSalAtl2s542:384504..387214+ (Lepeophtheirus salmonis)
TTCCAATTTTCCCTTTCCCTTTTGTGAATCGAGGTTGAGAGTAAGTAGAC
ATAAAAGCTCGACGTGTAACTAGAGTTTTGGAGGAAAAGGGAGGAAAAGT
TGTTAATGGGAAGATGAATGGAGAATGTCTGTTGTTCTATTTATCTTCTC
TTGTTCTTCTCTTGTTCTTCTCTTGTTCTTCTCTTGTTCTTCTCTTGATC
TTCTCTTTTTCTCTCTGCACTGGTTTAGTCTGTTCTGAATTGACTCTCAA
GTATAATTTAGTGTGTGAGAGTAATTAGCTTAGTTGGCGAGTTGGTTTGA
CGGTGTCTGTGTTGTTGGTGGAAGATGGGGAATGTGTTTGCATCCCTGTT
CAAGGGTTTGTTCGGGAAGCGCGAGATGCGTATCTTGATGGTTGGGTTGG
ATGCGGCCGGAAAGACGACGATTCTGTACAAGCTGAAGCTGGGTGAGATC
GTGACAACGATCCCGACTATAGGTGAGGCCAGTGGCATCCCTGAGTGAGT
CTCATACCTCCTCCTCTGCTTAGGTTTCAACGTGGAAACTGTGGAGTACA
AGAACATAAGTTTCACAGTTTGGGATGTGGGCGGACAGGATAAGATCCGG
CCCCTCTGGCGGCACTACTTCCAGAACACGCAAGGCCTCATCTTTGTGGT
GGYCTCGAATGACCGAGAGCGAATCGGAGAGGCTCGGGACGAGTTGATGC
GAATGTTAGCAGAGGACGAACTCCGTGAAGCCGTGCTCCTCATCTTTGCC
AATAAACAGGTTGCCAGAGTTACAAGAMTATTCACTAGTCTCTCCCTCTC
TTAACCCCTTTTAGGATCTGCCCAATGCAATGAATGCCGCGGAAATCACT
GACAAACTGGGCCTCCATTCCTTGAGAAACAGGAATTGGTACATTCAGGT
AAGATTCTTCTCCTATGCTCATTTATGCTCATTTATGCTCATTTCCTTGC
TTCCATTCTTGTAGGCTACATGTGCTACTTCTGGGGATGGATTGTATGAA
GGTTTGGACTGGCTCTCTAATCAGCTGAAAAATGCGAATCGCTGATCCAC
TTATTCCCAACATTCCAATGTGTATATATTTACTTATATGTACGCCAATT
TTTGGTTGTTTGGTTTTTTGGGTCTTTTTTTCTTCATAAAATGAGTAACA
AATAACTGTTATCTTTCAAACAGTAGCATACAATTACGATAGCCTACTTA
TTTCTTTTCCTTAATGACTGGGAATGTATATAATTATTTTAGTCACGTTC
TATAATTAATAATTTGGTTCTGTTGTAATTTCTATGGTATACAATTAATT
CAAATAAATACATTCCTTTTTAAGTAATTTTTTCCCCTTCATTGTGTCCT
GTTATTAACCCTTAAACAGTTAGCTCTTACGCTTCAATGATACACGTTTC
TTGCAAGTTCTTAATAGCGATTAAAGGAATACTTGGGTTATTGTAAACTT
TGCGTAACTACTAAGGGGTAACATGTAAGCCAAAGTGGGGGGGGGGGAAY
TTATATGAACTCAATATAAGAATATCAAATTTTACAAAAACCTCTCCCTG
ATGCATTTAGAACCTCAGTCAGTACCAGATAAACGACTTAAACTTCTCCA
TAAATTGTGATCTACCCTGTACTCATATCATAATGTGAAAATTAAATAAG
GCTTATGGTGCGGCCAAACTTGAGCCTATCTATTTTAAGTCTAATCGTCC
TGAGGCTTAACTTATTTTTATTTTCTTCACCCAAAACTGCTCGCAGCTAA
TTTAATGAAGTTATGCCACTTACTCTGCTCTTCTCGCGAACATTCTTCAA
ATTGTTGGGCTTACCATGTTCATTTTAGTAGTTTTTTTTTACTTACCTAA
AATGCAAAATCAAACTTCACCTATTTTCGTTCGAGATAGATACTCAAAGT
TTTATAAATTAATTCCAATCGAAAACTGAGCTTATTTGTTATAATGTTAA
TGAAAATGATGCCTTCTAGAGCAGTAGTTCCCTAACTTTTTTGAGTTCGA
CCCTTAAAATAGGTTGTTAGACAATGTGCGACCCTACATTTCTCATTGAG
AGAAGAATTTAAAATTTTGAGTACATTTTATGCAAATAGTCTAATAGATG
ACTTCAAGCCCTATAAAGTTCAACCCAGAGGCAAACATTAGAACTTATTT
GACTATTATGATCAAAAATAAATATTATAATTCTACATATGTGTGTTGAA
TACAAGAAAGAATACACGATTATTTTTCCTAAAAATATAGCAAGGACAGT
TTTATATTAATTGTTTATTACTTTACCATTTCTATTATAGAAATATTTCA
ATTTTTCTACTGTACGACCCGATATTTAAGGTTAATTATTATGAAAATAT
CCTACAAAATCATAGTTAAGCTTTGGTAATTGGTACTCCCACATTTAATA
AGAGGCGCTTCTTTAATTACGAGGAATAAAAAAGCTTTAGAAATAATAAC
AAGGGAAGAAACTACATCGAAACTCAAATCCATTGTTTAATTTTGTGTCT
TTTTCATCATCTTGCGAATTAGTTGAATACCAGAGGAACCCGGGAATCGA
GTCCATATTTTGAATACTTGCTACTCAACTTGATCTCATAAACAGAGACT
CGAGACTTGACTTGTACTCGATAGCTATGACTAGCGCCTCGAAAGCTAGT
TTATACCAAGATTAATAGAAATATTTCTATTAACTCTGGTTTATACTAAA
CTCAACAAAAG
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