EMLSAT00000008786, EMLSAT00000008786-704633 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008786
Unique NameEMLSAT00000008786-704633
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s545supercontigLSalAtl2s545:379843..380178 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008786 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008786EMLSAG00000008786-691552Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000039086EMLSAE00000039086-748014Lepeophtheirus salmonisexon
EMLSAE00000039087EMLSAE00000039087-748015Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777067auto777067Lepeophtheirus salmonispolypeptide
EMLSAP00000008786EMLSAP00000008786Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008786

>EMLSAP00000008786 ID=EMLSAP00000008786|Name=EMLSAP00000008786|organism=Lepeophtheirus salmonis|type=polypeptide|length=90bp
MGGWKLEVFRFSVYIFFPVACFHLYHKDNLLDDSFRRVQSKIXPAEEALN
RMKLTRIKEALSELNEKEKINKLKKELELMSASSTEMNEK
back to top

mRNA from alignment at LSalAtl2s545:379843..380178-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008786-704633 ID=EMLSAT00000008786-704633|Name=EMLSAT00000008786|organism=Lepeophtheirus salmonis|type=mRNA|length=336bp|location=Sequence derived from alignment at LSalAtl2s545:379843..380178- (Lepeophtheirus salmonis)
ATGGGGGGATGGAAATTGGAAGTTTTTCGTTTCTCCGTCTATATTTTTTT
CCCAGTAGCTTGTTTCCATTTATACCATAAGGTGTGAAGAGGTGGAATGT
ACAATCAATAGTCATTTCATTTGTGTTTTTTTTCTCTCTTCTAGGATAAT
TTGTTAGACGATTCCTTCCGACGTGTTCAATCCAAGATCTMCCCTGCCGA
AGAAGCATTGAATAGAATGAAATTGACTAGAATCAAGGAAGCACTTTCGG
AACTGAATGAGAAGGAAAAGATCAACAAGCTAAAAAAGGAATTGGAGTTG
ATGTCTGCTTCATCTACTGAGATGAATGAGAAATAA
back to top
Add to Basket