EMLSAT00000008887, EMLSAT00000008887-704734 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008887
Unique NameEMLSAT00000008887-704734
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s554supercontigLSalAtl2s554:370357..371198 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008887 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008887EMLSAG00000008887-691653Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000039502EMLSAE00000039502-748430Lepeophtheirus salmonisexon
EMLSAE00000039503EMLSAE00000039503-748431Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776969auto776969Lepeophtheirus salmonispolypeptide
EMLSAP00000008887EMLSAP00000008887Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008887

>EMLSAP00000008887 ID=EMLSAP00000008887|Name=EMLSAP00000008887|organism=Lepeophtheirus salmonis|type=polypeptide|length=154bp
MGKKDESLLNVTNGAGDNDKECYEEKLKHVSIISKPMASRKLAKKIYKCI
KKGMKHKTYVRSGLKSVQLHLRKGERGILIFAGDVTPIDVMCHLPAVAEE
KDIPYCYTPSRADLGSAMGVKRGTLTLLIREHEDYKELFDEITSEVHXLP
IPSL
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mRNA from alignment at LSalAtl2s554:370357..371198+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008887-704734 ID=EMLSAT00000008887-704734|Name=EMLSAT00000008887|organism=Lepeophtheirus salmonis|type=mRNA|length=842bp|location=Sequence derived from alignment at LSalAtl2s554:370357..371198+ (Lepeophtheirus salmonis)
TTGACGTGGAATATTTGGCAACCGTGTTTCCTTTTATGTTTATTTATTAG
CTTTATTTTTTATCAGGTTTCGTGAGGAAGTAAACACGTGAGTTTATTTT
GAAGTTCATTCGAATTGGTTTTAAAATATCTCTGTGCATCCGTGGATTTA
GTGATTTAACCATTACTATGGGTAAGAAAGACGAATCTCTTTTGAATGTT
ACAAATGGTGCAGGGGACAACGATAAGGAATGCTACGAAGAGAAGCTGAA
GCATGTGAGCATCATCAGTAAACCCATGGCGTCTCGAAAACTCGCGAAGA
AGGTAAGGCTTTTTATTAATGGACTTGCGAGCCTGATATTCCGTTAATCA
CATGGATTTTTTTATTTGTCTCTCTCTCTCCCTATAGATCTACAAATGCA
TAAAGAAGGGAATGAAACATAAGACGTACGTTCGCAGTGGGCTCAAGAGC
GTTCAACTTCATTTAAGGAAAGGAGAAAGGGGAATTTTGATTTTTGCGGG
AGATGTGACTCCCATTGACGTGATGTGCCATTTGCCCGCAGTAGCAGAGG
AAAAAGACATTCCCTATTGTTACACGCCTTCCAGAGCAGATCTTGGATCT
GCCATGGGAGTTAAACGGGGTACTCTAACGCTTTTAATACGTGAGCATGA
GGACTATAAGGAACTTTTTGATGAAATCACATCTGAAGTCCATKCCCTTC
CTATCCCTAGCCTCTAATCATTGACTTTTCAATAATTCCATTTGATCCTT
TATATTTGTATATATGTATGTATCTTGCTTTCAACGGTTTGATTCAAATA
AATTTGCTAATTTCAAGGATATTTGATAAATTAATTTAGAAT
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