EMLSAT00000008897, EMLSAT00000008897-704744 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000008897
Unique Name	EMLSAT00000008897-704744
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s554	supercontig	LSalAtl2s554:399961..405648 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000008897 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000008897	EMLSAG00000008897-691663	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000039529	EMLSAE00000039529-748457	Lepeophtheirus salmonis	exon
EMLSAE00000039530	EMLSAE00000039530-748458	Lepeophtheirus salmonis	exon
EMLSAE00000039531	EMLSAE00000039531-748459	Lepeophtheirus salmonis	exon
EMLSAE00000039532	EMLSAE00000039532-748460	Lepeophtheirus salmonis	exon
EMLSAE00000039533	EMLSAE00000039533-748461	Lepeophtheirus salmonis	exon
EMLSAE00000039534	EMLSAE00000039534-748462	Lepeophtheirus salmonis	exon
EMLSAE00000039535	EMLSAE00000039535-748463	Lepeophtheirus salmonis	exon
EMLSAE00000039536	EMLSAE00000039536-748464	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto777289	auto777289	Lepeophtheirus salmonis	polypeptide
EMLSAP00000008897	EMLSAP00000008897	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s554:399961..405648-

protein sequence of EMLSAP00000008897

>EMLSAP00000008897 ID=EMLSAP00000008897|Name=EMLSAP00000008897|organism=Lepeophtheirus salmonis|type=polypeptide|length=756bp
MGKTNFQYDETGNTYYYVFLTFLGLILFPSTYYSLLKGKKEESGKKSKVT
GGVSAKGTLYWDACREKAERLSTKDPWRSYKKASKYILLAVGWGLFAMLI
NQISQFDYEMANFDPYEILEVSYDSTPKEIKKKYRELSLKYHPDKPTGNE
KLFMKLTKAHDALTDETAKYNWEHYGNPDGPQAMQFGIGLPAWIVEEKNS
IWVLGVYTLIFMIGLPTAVYYWWSNSIKFSGEQVLLDTTQLYYYFFHKTP
QMMLKRIIMVLAASLEFERGHNQAVVERPTDNVEIPQLMKHISNLGVNNK
EKPLCFGYSVKARTLLFAHLSRIPLPRNTLHLDRLLIVEKCPFLIHEMVN
CICQLILLALAGRIARRPSLDTIESTMKLSPMIDDDRRNLLRSLTDEQYK
DVLRVLATMPLISIDVTTEVVDDEEQHVVTAGSLVTVSLNLYRRSMETLM
TGTSIFKEGSDCEQEDKDSDSDIEDLVELNPEETQNNPEEEKKKAPVWKK
PQKKKSSKKPGASSKGKSKPKPKASSSTNAESNQNATESGSNVQDKASDK
LIKVCDKSSPYVKSKNRRKKGGDGSEGSEAESGSESDFNEDQDKGAQSNA
DNEDDEEAEWERFQSKMNKREKALESKSRVSHSVHCPYFPDDKQEYWWCY
ISERKTRTLMTPPNLMTSLVDSEFVKLVLNAPPKPGPYNFTVCVRSDSYS
GLDIQEDIKLDVQEAREAPTDHPQWEFEDDEEEDNKSDEDSDDDYATDED
FEEEED

mRNA from alignment at LSalAtl2s554:399961..405648-

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000008897-704744 ID=EMLSAT00000008897-704744|Name=EMLSAT00000008897|organism=Lepeophtheirus salmonis|type=mRNA|length=5688bp|location=Sequence derived from alignment at LSalAtl2s554:399961..405648- (Lepeophtheirus salmonis)
GACAGAATGGGTAAAACGAATTTCCAGTACGACGAAACGGGGAACACTTA
TTACTACGTGTTCCTCACGTTCTTGGGCCTCATCCTCTTCCCCAGCACCT
ACTACTCCCTCCTGAAGGGGAAGAAGGAGGAGTCTGGCAAGAAGTCTAAG
GTGACGGGAGGAGTGTCTGCCAAGGGGACTCTCTATTGGGACGCTTGTCG
CGAAAAAGCGGAGCGTCTGAGCACAAAAGACCCTTGGAGGTCCTACAAGA
AGGCGAGCAAGTATATCCTCCTTGCCGTGGGCTGGGGCCTTTTCGCCATG
CTCATAAATCAAATCTCTCAATTCGACTACGAAATGGCCAACTTTGATCC
TTATGAAATCCTGGAGGTCTCGTATGACTCCACTCCCAAAGAAATCAAAA
AAAAGTATCGAGAGCTTTCCCTCAAATATCACCCCGATAAACCCACTGGG
AACGAAAAGCTTTTCATGAAGCTAACAAAGGCCCACGACGCCCTCACGGA
CGAAACGGCCAAATACAATTGGGAACACTACGGAAATCCGGATGGACCTC
AGGCCATGCAATTCGGAATTGGTCTTCCTGCCTGGATTGTGGAGGAAAAG
AACTCCATTTGGGTTCTGGGAGTATACACTCTGATTTTCATGATAGGACT
ACCCACGGCTGTCTACTACTGGTGGTCCAATTCCATTAAGTTTTCAGGAG
AGCAAGTTCTATTGGATACGACACAGCTCTACTACTACTTTTTCCACAAG
ACACCCCAAATGATGTTGAAAAGGATTATTATGGTTCTTGCAGCCTCTTT
GGAGTTCGAACGGGGTCATAATCAGGCCGTAGTGGAGCGACCCACGGATA
ATGTGGAAATACCTCAACTTATGAAACACATTTCCAATCTGGGTGTGAAC
AATAAGGAGAAACCTCTTTGCTTTGGCTACTCTGTGAAGGCCAGAACCCT
TCTTTTTGCGCATTTATCTCGCATCCCTCTCCCTCGAAACACTCTTCACT
TGGATCGACTCCTCATTGTAGAGAAATGTCCCTTTCTCATCCATGAAATG
GTCAACTGTATTTGTCAACTCATTCTTTTAGCACTTGCGGGTCGTATTGC
ACGTCGTCCGAGTTTGGATACAATTGAATCCACAATGAAGTTGAGTCCAA
TGATCGTTCAAGCCCTTTGGGATAAAAAGAGTCCTCTTCTACAATTGCCA
CACATTGAGGAAGAACATTTAAAGCACTTTTACTCTCGCAAGCGAAACAT
TAAGAGTCTTCACCAACTTGCACAAATGAAAGWAAGAYCMAAACATTGGC
TCTCCAATGANNNNNNNNNNNNNNTCATTTTCCATAGGATGATGACAGAA
GGAACTTACTCCGAAGTTTAACGGATGAGCAGTACAAGGATGTACTCAGG
GTTCTCGCAACCATGCCATTAATTTCAATTGATGTAACAACCGAGGTTGT
TGACGATGAGGAGCAACATGTTGTCACTGCGGGATCTCTCGTGACCGTGT
CTCTAAATTTGTACAGGAGGTAATGATTCATTCTTCGTTTGACTCTTTAT
GATTGTTGTATGTAATTTAAGGTCCATGGAGACTCTCATGACGGGCACTA
GTATTTTCAAAGAGGGATCAGATTGTGAGCAAGAAGACAAGGACTCTGAC
TCTGATATTGAAGATTTAGTGGAACTCAATCCCGAAGAAACTCAAAACAA
TCCAGAGGAAGAAAAGAAAAAGGCTCCTGTTTGGAAGAAACCTCAAAAGA
AAAAATCATCGAAAAAGCCAGGAGCTTCTTCTAAAGGGAAATCCAAACCC
AAGCCAAAGGCTTCCTCGTCGACTAATGCCGAGTCGAATCAAAATGCTAC
TGAATCCGGGAGCAATGTGCAGGTAAGCATCTTTCCATTATTTTATATAT
TTTTTTGCCACTACCCAAACCATTCATTCAAATGTACCTACATTATGAAA
TCACGAAACAAACATTCATTTCCTTTCATCCTTCAGGATAAGGCTAGTGA
TAAATTAATTAAGGTATGTGACAAATCGTCACCCTACGTAAAGTCCAAGA
ATAGACGGAAAAAAGTGAGTTGTTTGCTGCTATTTATGTATTTTCTTTTA
GCTCCTTGTCGTAGTTTCATCTCCCTACTTAGTCGTTGTATCTTTCTTTA
TAATATCATTTTCTATAACCCTGTATCATTCATTCATTGTTTTGTGATTT
ATTTATTGCATATTTTGTTTCATAATAGAGCGTTTTCATTCATGTCAAGA
GTATAAACTAAAATACAAGCCGTCTTGGAGATAAGGTTATTTTGAAATAT
CGTAAGGAAACTTCATCTTGTGGCTTTAAAGATGACTTGATGTAATAAAA
AAAAAAGCAGTNGATATTTGAATAAAAAGGAATTTTAATTTTGGTGGTTT
ATGCCTATTCCTCCTCCTCCAAGATGGCCGATTATTAGAATGATGACGCC
ATGTGAAAACTGTCTATATTGTTTATTAACTTTAATGACTTGGGAAGTCA
TCATTGACTAAATTGCTCGTAGCATAAAAAACACAGCTGATCAGATGTAT
AAAAATATAGTAACTCAAAGAGAGATCACTCTAAACTCATTCCTTGCTGG
CACAATAGAATTTTTTTCAGGATAAAGGAATAATTAATTAAGTAAAGCAT
CCCTATTTTGCGAACTCATATTAGTTCGTTTTTTTGTAAATTTATGCTTG
CCGCAATTTAACCACTGTTTACATCCCTTATATAATGACTGAGTAAAATT
ATCTAATTATTAGTATACGCATCCATATATATCTATTTGCAATTTTTCGT
TCAATATTTTTTTTAAGGTACAGGTAGCAGAAGGGAGGCATCAGTATCAT
ACTCAGGTAAAATACCTAGGAATATATATTCCATTCTGCGGTTTTCTTAT
AGAAATTCAATTTATGTTTATAGAGTCTTAAATATATCGTTTTCAAAAAT
GACATATGTTCTTTGAAAAGAATGAAACAAAATATATTTAAATGCCTAGA
ACTAAGTGTAGTCAAAATGTATTGTACAGGCATACCTTTTTTGTCATGGC
TTGAGTATCTTTGTATCATCATAATATATATGTATATAGGTAAAAACATA
TCTCGTGTATTGTTTATTAAATTCATATAAGCATGTATTGAACAGATATG
GCACACTTGTGCAGCAGCTAGTATTATCTCCTTATTAATTATCTTCTTTT
TCATCTCTTACATCAAAGCCTTGATTTTTTTGTTTTTTTTTAAATAAGTA
ATAATACGTTATATATAAGTAGAAGAAGATTTTTCTAATAAGTCACAACC
ACGAGCGGGATTAAGATGTGGGAAACTTTTCCCCTCCTAGACTTACCACA
TTTATGTAGTGACATACTTAAATAGTCTTCTCCGTCACTCAGTTTAAAAA
TCATGACCAAAAATATACAAAAAAAAAGTCGATTATATGCTATTTAGTCA
AATTTATGGTGCAAGTGTAGATACGCAAGAGTTTTAGCTATAGTTTAGAA
CCTTTATTTGATTTAAAGAAATTGTAATGGCTCCGATATGCCTCTTTCAA
CCATAAAATATATCAATTTCTCATATTTTGTTTACTGTGAGGATCAATTT
TGGCTACTTTAAGTGCCATTTGCGGTGGCATCGGCAAAGGATTAATGAAA
ATAGTTTATTCATAGAAATTGACGATATTTAATTCGTGGAAGAATCAATT
CTCCATTTTTGAGAAAAATCATTCTAGCTTGCCTTTGTATTGACGGGCTA
CATTTTTGTCTCTGATTTAAAAACAAAGTTTGAACATTATAAAAGCTCTA
AGATGGCAAAATACAAGTACATGTACTCCAAAGAAGCAATTATAGATTCC
TTATCAATATAATAATTAGTATTTCTTTATATATTTATTTGATTAAATAA
AATTATTTTTTTACCATTCTTTTAAAAGACCTCAATGCGTAGCCTATAAT
CCATTTTTAAGTCTAAAAAGAATCCATTTGGGGTTGTCTCCACAAGTATA
AGTAGTGTTGTAATTATCATTTTATTGAATCATGTTCATTTATCAAAAGA
AAACCTCAAAAGGCCTGTACTGTAGCAATTGTACATATTACTATTAGGGA
TATCGCTTTTATTTGATTCTGAACGATAATTGTTAAATAAAAAAATATTG
ATTTTAACCCCGGGAAGAATGTCAAACGAACTGCAAATACTTATACACTT
CTTTTATATAATTTAACCATTTTATTATGCAAATAAAACATTAGTTTACA
CTTTTTTCTTTTATTTTATAGTTTTCCCTACTTTTTTTTCTGTAAATATG
TTATTTTTGCATGTAAATAACTGTTATTAGTGTTTGTGAAAAAAGAGGAT
TTTTATTTTAACGACTTCTTTTCCACTTTAGGGAGGCGATGGTAGTGAAG
GATCTGAGGCTGAAAGTGGTTCAGAGAGTGATTTTAATGAAGATCAAGAT
AAAGGAGCTCAATCTAACGCAGATAACGAGGATGACGAGGAGGCAGAGTG
GGAACGTTTTCAGAGTAAAATGAATAAGTAAGGCTCAGCTCTTTAAATTT
TTTTATTAACTAATTGACCTGCTTATTATGAAAATGTGTATATAGACGGG
AAAAAGCCTTAGAGAGTAAAAGTCGGGTCTCGCATTCTGTCCATTGCCCT
TACTTCCCAGATGACAAACAAGAGTACTGGTGGTGCTATATTTCAGAACG
AAAAACCCGTACTCTCATGACACCTCCTAATCTCATGACCTCCCTTGTGG
ATTCGGAGTTTGTCAAATTGGTCCTCAACGCTCCTCCCAAACCAGGTAAG
GGATACATTATTTGACATCTCTATATAATTTTTACTTATATMCCCCCCCC
CCCTMTTCAGGTCCATATAACTTCACCGTATGTGTAAGATCAGATTCTTA
CTCAGGCCTCGACATTCAAGAAGATATTAAATTAGATGTACAAGAGGCGC
GTGAGGCTCCTACAGATCATCCTCAATGGGAATTTGAGGATGATGAGGAA
GAAGATAACAAGAGTGATGAGGATTCGGATGATGACTATGCCACGGACGA
GGACTTTGAGGAAGAGGAGGATTAGTTACTGCTGCGTTGTTTTATATATA
ATCACGGTTATTACTAGTTGTTAATATCTATATGCATATTATATATATAT
ATAAACTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGTTTGTTTTTTT
TTCTTTTTTTTTTAAATAGAAAATGAAGAGATTCCAAGGGACATCTCTTT
TGAGAGAGAGACTCCCCTGGCTTTTATTTTTTTACAATAATGAAGATGAT
ACGGAACAAAATTACTATTTTCTCCCTCTCTCTCGCTCTTCACTCCTCCT
TTCTTAACCCTATAAATGTAACTTGTCTCTATACATATGTCAAACACATT
GGATGTGCAATACGATGATTATTATTCCAAACCATTATTATTACTATTTT
AATTATCACTTTTGTTACGTTGAATCTCAACGACAATCCATTCCGTTTTC
TTTTCATCCAAAAACAAACAAATTATTATTATTAGAAATAAATCAACTTT
GCCGCAACTCTTGAGTTAATTCCATGACATGGATTGAATATATCATTATT
AATATTATTAATTCGTTAAAAGATTACATTGCACATAA

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