EMLSAT00000008990, EMLSAT00000008990-704837 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008990
Unique NameEMLSAT00000008990-704837
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s562supercontigLSalAtl2s562:73390..75784 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008990 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008990EMLSAG00000008990-691756Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000039920EMLSAE00000039920-748848Lepeophtheirus salmonisexon
EMLSAE00000039921EMLSAE00000039921-748849Lepeophtheirus salmonisexon
EMLSAE00000039922EMLSAE00000039922-748850Lepeophtheirus salmonisexon
EMLSAE00000039923EMLSAE00000039923-748851Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771391auto771391Lepeophtheirus salmonispolypeptide
EMLSAP00000008990EMLSAP00000008990Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008990

>EMLSAP00000008990 ID=EMLSAP00000008990|Name=EMLSAP00000008990|organism=Lepeophtheirus salmonis|type=polypeptide|length=141bp
MKXAIVLIISCFALSQARPGGYTAKGGVVDFLKELDYLDQAVAAVLKRLC
PWSTMDRKFAWNKHIEEELIQEEAFRNERSNSPQVPSFFTSQQNFAKLAG
GLTFGEDASGSLQQTRLSRNAQPSPSRNLYYSSVFEKHAGQ
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mRNA from alignment at LSalAtl2s562:73390..75784+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008990-704837 ID=EMLSAT00000008990-704837|Name=EMLSAT00000008990|organism=Lepeophtheirus salmonis|type=mRNA|length=2395bp|location=Sequence derived from alignment at LSalAtl2s562:73390..75784+ (Lepeophtheirus salmonis)
AGTCTACGACTGTTATTGAAAGAAATCGCATCTCTCAACGATATATATTT TTTTAAATCTAGATAAGGTGCTTAACCATACATATATTTAGATCTTCCGA ATGTTGAGTCAAAAAATAATTTTGTATATTTAAAGGAYCCACACTTCGGA ATGAAASCTGCCATTGTTCTCATCATCTCTTGCTTTGCTTTGAGCCAAGC TCGTCCTGGGGGATATACAGCTAAAGGAGGTGTAGTTGACTTTTTGAAGG AATTGGACTATTTAGATCAAGCCGTGGCTGCTGGTAAGTCCAAGAAAAAT TCCTTTTAAGTGTACACTTATTAATATGAGATTTATTATCATAAGTCTTA TAAAATAATACATATGAAACCTTCAGACGTGAAAAATAAGACATTCCTTG AAGGTTGTTCACATATATTTACAGATGAATGAACTTGGAAATTTTTYTGA TAAWAAAATGATTTWTGAAAAAATAAAAATCCTTATTTTTTTTTTTTTTT TTTTTTTTTTGTTAATCCCTTKTKTTYTTCAGTAATKTTTAARCATCACT TTTGGGTTAGCATTGAACGTTAAGTTTTATTTTTTTGAGTCCAATCTAAT ACTTCATTCTTTGTGATGTAATCTTTGTAGTATGTGTAACCTAGGCACAT TCACCACMCCCAATTCAGAAACAAGAAAATATTTTTATTTTTTTTTTTTT GAGTGTTGAAAAGACTTTGTCCTTGGAGTACAATGGATAGTATTAGGCAC TAACTTCCGCTGAAAACAGGCAGGAGTTGCTAGTTTTGTTGTTGTTGTGT CTTGTATTTTTTTCTTTATTTTTCTTCCTTGACACTCCATTTTATCTTTT CAAATAAATTTAAAATGCCCATCTTTTCTTCCTTACACAACACCATTAAA GCATAAAAAATCCATTTTACAGGAAAGTTCGCATGGAATAAACATATTGA GGAGGAACTCATCCAAGAGGAAGCTTTTCGTAACGAAAGATCAAACTCAC CTCAGGTTCCATCCTTCTTCACAAGTCAACAAAACTTTGCCAAACTAGCT GGAGGATTGACCTTTGGAGAAGATGCTTCAGGATCACTCCAACAAACTCG ACTCTCACGTAATGCACAGCCATCACCTTCTCGTAATCTCTATTATAGTA GCGTCTTTGAAAAACATGCTGGTCAATAAGAAGGAAGGGAGAATCCAGAA TCTGGAAGTGTTATTATCTATTTGAAAGATTCAACAACGACTTGGATCAA TCATCAATCCCGTTCATATTATTGACAAAAAGCAAAAAAAAAGTCATTTA TTATTATTTATTGAGTTTCATTATTTATAATGCATTTATTTAACTATTTC TTCCCTTTTTTTTTTTTTTGTCAATTTGAGCTGTGAAATGTAAATTCATT TTTTATAACGAAAAAATATAAACAAAAAATAAACATTTAGTTACTTATTC TGATTGAAATCGAGACTATGTGACACAGTTCTAAAGTGTATTTACCACAA AAGGCTGCATATAAATATATAATATATGATTCGTTTTAGTGTGCAGAAAA TCCCTGAGAATCTCCTCTACTATGGAGTCCTAATAGTTCAAGAAAAATAA ATTAATGAACTTCATACATTATTCACAGCCTTACTTCACTAAAATAAAAT TTTACTATGTATTTTCTTGTCTGCTTTCGATTTGTATGTTTCTTATCTCT TATCAGTGTTCTTAAATTGATTGGTTGTAATTAATGTCTTAACTTTTTTT TTGTATCACACAACCTTTCATACGAAAAGAAACAGAGAAAAGGTCCAAAA TCAGTTTAGTAGTTAGACAATTCTTCTCAACTATAGAATTATTATTCAAA CATTGTTGGGAATTCTTTACAGCTAAAAAAAAGCTCATTCTAATTGAACC AATCACGTTCAAAACACTGATTAGGGAGGAAAGAAGCAGAAACAGCACAG CTGACAACAAATACACTCTCTATTAGTGAGGTAACGCCGTGAATAAGATT TTATTAGGCTTTGAACAATTCCCAAAAATAATTGAATAATAATTTCATAG CTGTCAAGAATCCATTAAAACCAACTGATTTTCAGACCTTTTTACTCTTT ATTTTTGGAAGAGCGGTTGAGGACTAGAATAAAAGGTATGACTGGTTTTG TATGTATGTTAATAGTTCGTAATTCAATATCTATGAATATTTACAAAAAA GGTATTGTAAAATAATTTATATACAGATCTCAAATAATTTTTGCAACAAA AGCTAAACATGAATAATAACATTCTTCTGTTTTAAAGATCTCTTCTTTTG TCATTTCCTTTATTTTTTTAAGTTCAGACGACGAAATGAAACTAGTTCCT CCATTACAGGGAGACTCAACTATTATGGGCAAAGATCCAATTTGA
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