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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s566 | supercontig | LSalAtl2s566:246245..251432 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000009027 >EMLSAP00000009027 ID=EMLSAP00000009027|Name=EMLSAP00000009027|organism=Lepeophtheirus salmonis|type=polypeptide|length=916bp
MVFYRTEHRRRNIPRQTKWSLCSRYDDVFDGASILFSLTSYTTLDLPTSR
PTGVSLNYDNGPICQIGQRRRTPAIICNYSKQPVKHWEELELSNSLWIRF
LWNPTLMEDLSRAPRQMASPFGAVENWFTDTNAKKRDDEIRVAIYSALAL
GALCLLSIGSYYSLIVLEPFLVPLFWALLTGFVLFPYKAYLTDSLKNFLR
NNDVDEPALVIAFKSAPRAFNSLCDFLGEYLLIQNVKVLLLAAFVVPFGY
CVYEYCFQLSVVLEIIDYILNIWRILGQVVSLPILLTLLFGYLGCLVLLP
TNNVIQKVFLKFYCNVIWALVGCTLFHTLPLPLFYFGLFIMLSIFYLGIS
SPEDSAQAHRPCDPRPREAIQNYVFDLLKSFNREEEKCPLVCENIDDEGT
QDKEEEKIEEEEEFVDKNQPISSTPFPDIKDVPNPKRSVLETPVTHPGIS
ALRRETDASQRHFSSGSMVYSSSHLRSKPRRVLVCRRDSILGTITTDEPT
ASYIYISWVFWACCIIQLWVHPMLLHLLPLPTACYVIKRLCFYLELDSAI
ESKWEECSSRFCFWMKDNESFLVPYHFRYFGKMYFKAEKRALKLLPEFAD
VFVTGCLILSLIVVLLITGIFVTFQLYHECMYIIQTSGEVVSELSNSSIF
QGLGVFEGTESYVETAYTQGRSYISNFLKQNNISDKDNGEFEQDVLTLFD
RMYQYWLDRNNIGSEAKVGPHINEEAISSSVGDIASKMKNNFSFSLISNF
AHENMGMITSVLEHAWFLVKGNFGIVISLLIELLLVLFHSGSGFINFMIG
LVVYFTALFYLLSASDRNYIPLVVMSELSVMGDDFATAMNKAIKSVFIIT
FKMASFYGLWTYLTHTLFSASIVMVPVLAATFLAAVPVAGQFLVAIPAAL
ELWFSKGRGERLLHVS back to topmRNA from alignment at LSalAtl2s566:246245..251432+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000009027-704874 ID=EMLSAT00000009027-704874|Name=EMLSAT00000009027|organism=Lepeophtheirus salmonis|type=mRNA|length=5188bp|location=Sequence derived from alignment at LSalAtl2s566:246245..251432+ (Lepeophtheirus salmonis)
ATGCAATACATGGGCCCATAATGATCCCTGACTGTGAAATGGCCCATGGT
GTTGCCAATAAAGATGTGCCCATCATGGTATTCCAAATTGCTAATCTAAA
TAAAGCATAGATTGGAGATAATGATACTGTTCAGTAATTTATTTTAAGTA
CTAGTGCCCTTACATTGTGACTAAACTGGATTGTTTTCCATCGGATTCAA
CTTGAGATGAGACGACAGGAACGTTAAGTAAAAAATATTGAGGGGGAACC
AGGTGATCAGGATAAGCCTGTCAAAAAATAAAACAAAGTTTTTATTTAAG
AGAGTCTAGCCGGATGAGGAATTCATCATTCAATCATTATAGTCTTACAA
GAAATCTTCTCGCTTCACTCCACGAGGCGGCACCATTTTGATTTGCATCC
CCGTTCTCAGATAACGGAAATGGCAATGGAGGACCAACTAACCTACTAAT
GAGGTTATTTCGGTGGCGATTGCCCTCCTGCACAGCGTCTGCCCGTCTCC
TACGATCCTGAAATCTATAATATTCGTTTTTAGTCGGTAGTACGAGATTC
ATCAATGTTGATTTAGAGTTACTGGCAACTTACGGTCTATCATAAAATCT
CATAATTTCAGCTCCTTCTTGTCGAGCCACTTGAGTCATAAGATCCCTAT
AAGGGACCTCAACTCTGACTCCAGACAAGGAATCTTCTGAATGGTTTTCT
ACAGAACGGAGCATCGTCGTAGAAATATTCCGAGGCAGACTAAATGGAGC
TTGTGTAGTCGTTACGATGACGTCTTCGATGGGGCATCCATATTGTTCAG
CTTGACGTCTTATACGACTCTGGATCTCCCGACGTCGCGACCAACTGGCG
TCTCCCTCAATTACGACAACGGCCCCATTTGTCAGATTGGACAACGACGT
CGAACTCCTGCAATTATTTGTTAGTAGATTATTTCCAATTATTATCATCT
TTTTTAATTGTAAGTATCGCACCTAATGATATTGAGACCGCTGCTTCCTC
CTAGATATTGCTGCTCAGTGCCGGATTCGGAGGCGATTAAAGGTTCCACG
TCCATTTCGTTACTCATTTGGTTGCTGAAGGTAACTACAGGTATGTTATG
TCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTAGATTCCTCCCTCCTCTC
TCTCTCTCTCTCTCCCCCCCCCCCCCCTTTTCKCRGGCGMGCCCTGCTCG
TCTACCCCACCTATTTAGATCCACCCCACACGGAGGAATTGGNGTTTTGA
AGTCACTCTAGCTGTCTACAAGATGCTAGATGCTTCTTAGAGTTCGATAT
CAGTCAACAACTCTTAATACTAGGGATGAATGATTTGATTAAAAAACTAC
AAGTAGGTGCATAGAATGACCTGAAAAAATTACAAAGCAGATTGAACTTT
GAAGTGGGATCCCAAGTATGGCTCAAATAATGCTAGCCTCGGCTCATGAA
TAAGCTCTGACGTCAGAACATGAATTTGAAAATGACGTTGTAGTTAATAA
ATAGTTTCTAAGTAGCAATTCCTACATAACATAACTTGATAACTATTAGT
ATTACATGCTTGTGGTATGTGAGCTAGGCACCCCCTCTTTTACCCACAAT
TAGCATAGCTGCTTGAATGCTGATTGTCGACGATTATAATAATAATTAAT
TAATATGTAAGCAAACAACCCGTGAAGCATTGGGAAGAACTTGAATTAAG
TAATTCTCTTTGGATTCGTTTCCTTTGGAATCCAACTCTCATGGAGGACC
TGAGCAGAGCTCCTCGACAGATGGCATCTCCTTTTGGAGCCGTGGAAAAT
TGGTTCACGGATACTAATGCTAAAAAGCGAGATGATGAGATCCGTGTAGC
CATATACAGTGCTCTGGCTCTGGGAGCATTGTGTCTTCTTTCCATTGGTA
AGATGAACTTTTATTAGGTTGATTTTCAAAAAATACATAAAAAATCTCAA
TATAGTACAAATATGTAGTTGACAATTGTATTATACATACAATAATATTT
CATTTTTCTTTCAGGGTCATATTATTCACTGATTGTACTTGAGCCCTTTC
TTGTTCCTTTGTTCTGGGCCCTTCTGACGGGATTTGTTTTGTTTCCATAC
AAAGCATATTTGACGGATTCCTTGAAGAATTTCCTACGAAATAATGATGT
TGATGAACCTGCCTTAGTGATTGCTTTTAAAAGTGCGCCTCGTGCATTTA
ATTCCCTCTGTGATTTTCTTGGTGAATATCTTTTAATTCAAAATGTCAAA
GTTCTACTTCTTGCTGCTTTTGTCGTTCCTTTTGGTTATTGTGTCTACGA
ATACTGTTTTCAACTATCTGTGGTCCTGGAAATAATTGGTTAGACAAATA
TAGATTTAATTTTTAGAGAGTAAAGTTCTAATTATTTTTCTACTAATAGA
TTATATCCTCAACATATGGAGAATCCTTGGTCAAGTTGTTTCGTTGCCTA
TTTTATTAACTCTATTATTTGGATATCTTGGATGTTTGGTTTTACTTCCT
ACAAATAATGTTATTCAGAAAGTATTTCTCAAGTTCTATTGTAATGTCAT
TTGGGCTCTTGTTGGTTGTACACTTTTCCATACGTTACCTTTACCTCTAT
TTTATTTTGGATTGTTTATAATGTTGAGTATTTTCTATCTGGGCATTAGT
TCTCCAGAGGATTCTGCTCAAGCACATAGACCTTGTGATCCAAGACCGAG
AGAAGCTATACAAAATTATGTCTTTGATTTGCTTAAAAGTTTTAACAGAG
AAGAAGAAAAGTGTCCCCTAGTTTGTGAAAATATCGACGACGAGGGCACT
CAGGATAAGGAGGAGGAAAAAATCGAAGAGGAAGAAGAGTTTGTTGATAA
AAATCAGCCCATATCCTCTACTCCTTTCCCTGATATTAAGGATGTTCCTA
ATCCCAAACGTTCTGTCCTAGAAACTCCAGTTACTCATCCCGGAATTTCA
GCTCTTCGTCGTGAAACAGATGCCTCTCAAAGACACTTTTCTTCTGGATC
AATGGTATATTCAAGTTCTCACTTGCGGAGTAAACCACGTAGAGTACTCG
TTTGCAGAAGGGATTCAATCCTTGGAACCATAACCACTGATGAACCTACA
GCAAGTTACATATATATCAGTTGGGTTTTTTGGGCTTGTTGTATAATTCA
ACTTTGGGTTCATCCTATGTTACTTCATCTTTTACCTTTACCCACCGCAT
GTTACGTTATAAAAAGGTTATGCTTTTATCTTGAATTGGACAGTGCAATT
GAATCCAAGTGGGAGGAATGCTCATCTCGATTTTGTTTCTGGATGAAGGA
TAATGAGTCTTTTTTGGTCCCTTATCACTTTAGATACTTCGGAAAAATGT
ATTTCAAAGCTGAGAAAAGGGCTTTGAAGCTTCTTCCAGAATTTGCAGAT
GTTTTTGTTACGGGATGTTTAATATTATCTCTTATCGTTGTCTTACTGAT
TACTGGAATATTTGTTACTTTCCAATTGTATCACGAATGCATGTATATTA
TTCAAACATCTGGGGAGGTTGTATCTGAACTATCAAATTCATCAATATTT
CAAGGTTTGGGCGTATTTGAAGGAACTGAGTCCTATGTCGAGACTGCTTA
CACCCAGGGACGCTCTTATATTTCCAACTTTTTAAAACAGAACAATATTT
CTGATAAAGATAATGGCGAATTTGAACAGGATGTTTTAACGTTATTTGAC
CGTATGTATCAGTACTGGCTTGATAGAAATAATATTGGAAGTGAGGCCAA
GGTTGGGCCACATATTAACGAAGAAGCTATCTCATCTTCAGTTGGAGACA
TTGCATCAAAGATGAAGAATAATTTTTCCTTTTCTTTAATTTCTAACTTT
GCACATGAGAATATGGGAATGATTACTTCTGTTCTGGAACATGCTTGGTT
TCTTGTTAAAGGAAACTTTGGTATCGTTATTAGCCTTTTAATCGAGTTAT
TGCTAGTTTTGTTTCACAGTGGAAGTGGTTTTATCAATTTTATGATTGGA
TTGGTGGTTTATTTTACAGCACTTTTTTATTTGTTGAGTGCAAGCGATAG
AAATTATATTCCATTAGTAGTAATGTCTGAACTTAGTGTTATGGGAGATG
ACTTTGCTACTGCTATGAACAAGGCAATCAAAAGTGTTTTCATAATAACT
TTCAAAATGGCTTCCTTCTATGGCCTTTGGACTTACTTAACTCATACATT
ATTCAGCGCGAGCATTGTCATGGTTCCGGTACTTGCAGCAACTTTTTTGG
CAGCTGTACCTGTTGCTGGMCAATTTCTTGTTGCAATTCCAGCAGCTCTT
GAACTTTGGTTTTCCAAGGGTCGTATCGCCTCAGCAATATGCCTAGTACT
TTGCCATTTTGCTCCCATGTGTTTAGTAGATGCATCCATTTATGCTGAAG
TTAAAAGAGGTATTCATCCTTGGATTACTGGTCTGAGTATTGTGGGTGGT
ATTTATTGTTTCGGCGTTCCTGGAGCTATTTATGGACCTCTCATCGTTTG
TGCGGTGTATGTGGTTCTTACAGTTTATACTGGGTTTATGGCAATAGATC
ATCCTGCTGAAAATATCGGATCTACGACATTTAAAACTCCAAATTTGAAA
CGGTCGGACACTATATTATAAAAAGGCATCTTATTTATATATAGCTTTAA
TGTTATTTGCTTTAATAGGTGGAGAAAGGCTGTTGCACGTATCTTAGATC
ATTCTCTTATTTACTAATCTTGATCAGGAGTGTTCCTGCACTACCAATTG
TCAATGATATTTTTAGTATTAGTCAACCTTCTTTGATAGAATTACAGTCC
TTTTCCTTTTTTTTTTAATCATTTAATGCTTCAAATAAATTCATTCTGTA
AAAGCAAATTACGACTGTATTCTTATCCAAAGATATAATTCTTATCATCA
CTGCATCACTTGTGCTAACCAAGCATTTAAACAAATAATTAAGGGGTCGA
GAAGTTTACTACTTTTCTTTTACATAGATGGTCAGTTTCTTACGCCTTTT
ATAGATTACTATTATATATTTATATTATGGATTATTCTATATTTTATAAT
TTTGGGAAAGTTTTGGTCATGATGACTTATGTCAAGAAATTATATGTATT
CCTGAAATTTTTTAACACTGAATAAATATCATTTGAAC back to top
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