EMLSAT00000009033, EMLSAT00000009033-704880 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009033
Unique NameEMLSAT00000009033-704880
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s566supercontigLSalAtl2s566:265163..268669 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009033 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009033EMLSAG00000009033-691799Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000040102EMLSAE00000040102-749030Lepeophtheirus salmonisexon
EMLSAE00000040103EMLSAE00000040103-749031Lepeophtheirus salmonisexon
EMLSAE00000040104EMLSAE00000040104-749032Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775561auto775561Lepeophtheirus salmonispolypeptide
EMLSAP00000009033EMLSAP00000009033Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009033

>EMLSAP00000009033 ID=EMLSAP00000009033|Name=EMLSAP00000009033|organism=Lepeophtheirus salmonis|type=polypeptide|length=990bp
MTYKRRKSSDIRRERGSSRIFDFEKCRSKLCKIFFTERDLISRGSQDYDD
FWKFLRSYQCFQEKKRREGKGMEDADPRSGISFDLQPSDPKDLLNRIPYQ
DPDDYNILTESMIKEFQYIVSLYVDFLQREKLKKLKKLKESQSNLPISGY
RNEIIQSLVQKQVVIIAGDTGCGKSTQVPQFLLEAGYEKIACTQPRRLAC
IALANRVAYETLHQFGTEVGYQIRFEKKRTDKTRILFITEGLLLRQVLTD
PKLGSYNVVILDEVHERHLSGDFLLGIVKCLLRARDDLKVILMSATINID
LFLKYFALEEAPIIQVPGRLYPIELRYFPIPDVEQGDGLNPAPYIRILRL
IDQKYSKDDRGDVLIFLSGHKEIRIITDATKSYSEKSGGKWIVLPLHSSL
SLADQDKVFNYAPQGARKCIISTNIAETSITIEGVRFVVDSGKVKEMHYD
PYCKMRRLKEFWICNASAEQRKGRAGRTGPGVCFRLYSEKEKEALAKFSV
PEIQRVHLDSLVLQMISMGLPNARKFPFIEPPHPESLENAIITLKEQDAM
NEDETLTVLGSMLSNLPVDVTIGKMLIMGTLFYQVESVLSLAGALSIQSP
FTNDAYQNQECVAARKNLDSDHGDPITLLNSYREWLTVKSRNTENSRRWC
KTRGLEEQRFYELTKLRNQFKDILKDAGLVKPFNVLHPNSYFSNNPEFIS
VDGLDIVSVPGFPSKYSVSAKHQILIYMSLLETTKSYIMNPLRMPALPTL
LLFSKTMDTDKYISRIVFDSWIELRFPNPLMSQNQVVISFILRDSWNKLL
KSKLESDRNDKHFQDDLKSDGFILGDDLVDFIHHSEMNFSIRRLLPGDIK
VLYRPNNYEKVPESLVNPFVGEPKINSQKGGIQLNDVLTYDCIESLNDNI
AELTSNPSCVYCDETSYSHTLERMEHYRVCWKNNASKRKEGINRSNVEGG
ESSSNNKNGYFCDDCSKLLHLXSTGILRHKQKHRQEKEKT
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mRNA from alignment at LSalAtl2s566:265163..268669-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009033-704880 ID=EMLSAT00000009033-704880|Name=EMLSAT00000009033|organism=Lepeophtheirus salmonis|type=mRNA|length=3507bp|location=Sequence derived from alignment at LSalAtl2s566:265163..268669- (Lepeophtheirus salmonis)
ATGACTTACAAGAGAAGAAAAAGTTCTGACATTAGGAGGGAACGGGGCTC GAGCCGGATTTTTGATTTCGAGAAATGTCGCTCCAAACTTTGCAAAATCT TTTTTACAGAGAGGGATTTGATAAGTCGGGGTTCACAAGACTATGATGAC TTTTGGAAGTTCCTTCGCTCCTATCAATGTTTCCAAGAGAAGAAAAGGCG GGAAGGGAAAGGGATGGAAGACGCTGATCCTCGCAGTGGAATCAGTTTTG ATTTGCAGCCAAGCGATCCTAAAGATCTTCTGAATCGAATTCCATACCAA GTAGGATGTTTGATTCATCTCATTAATAATGATTAAGGAGTTACTCTAAT GCAATCAATCCTATTTGGGTTGATTTATCATTACTTATTACAGGATCCGG ATGACTACAATATCCTAACAGAGTCCATGATTAAAGAGTTCCAATACATT GTATCCCTCTATGTGGACTTTTTACAAAGAGAAAAGCTAAAAAAGCTCAA GAAACTAAAGGAGAGTCAATCTAACCTTCCTATCTCTGGTTATAGAAATG AAATTATTCAATCTTTAGTGCAAAAGCAAGTCGTCATTATTGCTGGCGAT ACGGGATGCGGAAAATCCACTCAAGTACCACAATTCTTATTGGAAGCTGG ATATGAAAAAATTGCTTGCACGCAGCCCAGAAGATTAGCATGTATTGCAC TAGCGAATCGAGTCGCGTATGAAACCCTTCACCAATTTGGTACTGAAGTG GGCTATCAAATACGTTTTGAAAAGAAACGGACTGATAAAACGCGAATCCT CTTTATTACTGAAGGGTTATTACTTAGACAAGTATTAACAGATCCAAAAC TTGGTTCCTACAATGTTGTGATTTTGGACGAAGTGCATGAGAGGCATTTG AGTGGAGATTTTCTTCTTGGTATCGTCAAGTGTCTTCTTCGAGCAAGAGA TGATTTAAAAGTGATTCTAATGAGTGCAACTATTAATATAGATTTGTTTC TTAAATATTTTGCGCTTGAAGAAGCACCCATCATTCAAGTTCCAGGACGT TTATATCCTATTGAACTTCGTTATTTTCCTATACCAGATGTTGAACAAGG AGATGGGCTTAATCCTGCACCTTATATTCGTATTTTAAGATTGATAGATC AAAAGTACTCTAAAGATGATCGTGGGGATGTCTTAATATTTCTCAGTGGT CATAAAGAAATTAGAATTATAACCGATGCAACCAAAAGCTATTCAGAAAA AAGTGGGGGTAAATGGATTGTACTACCTCTCCATTCATCATTGTCTCTTG CTGATCAAGACAAAGTATTTAATTATGCTCCTCAAGGAGCTAGAAAATGT ATTATATCAACAAATATAGCTGAAACTTCAATTACAATTGAGGGTGTAAG ATTCGTAGTAGATTCGGGAAAAGTTAAGGAAATGCACTATGATCCTTATT GTAAAATGAGACGTCTCAAGGAGTTTTGGATTTGTAATGCATCTGCTGAG CAACGTAAAGGTCGAGCTGGAAGAACTGGCCCAGGAGTTTGTTTCAGACT ATATTCCGAAAAAGAAAAAGAAGCTCTTGCAAAGTTTTCGGTCCCTGAAA TTCAAAGAGTCCATTTAGATAGTCTTGTTCTTCAAATGATATCCATGGGA TTACCAAACGCGAGAAAATTTCCATTCATTGAACCTCCCCATCCTGAGAG TCTTGAAAATGCTATTATTACATTAAAAGAGCAAGATGCCATGAATGAGG ATGAAACATTGACAGTATTGGGGTCTATGTTGTCAAACCTTCCCGTTGAT GTAACTATTGGTAAAATGTTAATAATGGGTACATTGTTTTACCAAGTTGA ATCTGTGCTTTCGCTAGCTGGAGCTCTTTCAATCCAAAGTCCTTTTACAA ATGATGCTTATCAAAATCAAGAGTGTGTAGCTGCTAGAAAGAATCTCGAT TCCGATCATGGAGATCCTATTACTTTATTGAATTCATATAGGGAATGGCT AACGGTCAAATCTAGAAATACTGAGAATAGTCGTAGATGGTGCAAAACTC GAGGACTTGAAGAACAAAGGTTCTATGAATTGACTAAATTGAGGAATCAA TTTAAAGATATTTTGAAAGATGCCGGGCTTGTATGTGATGAAGACAATTC TTCAACTGGTCAATCCAGCATACAAAGAGCTGCTCGTCATGGCGAACTAA AACATTTAAGGGCACTAAAAAGGGAATGGCACAAGTCCGAGAATTCGAAT AAAACCAAGAGGATATTAAAAATACAAAACTATGGTATTGAGGAGGNATA ATGAGTTAGACGAATCCTTCGATATAAAAGATATTGAGTTTCGTCTGAGG CATGATGACAAAAAAGTTAGAGAACTAATGGAAGGATCAAAAGCTTACTC TTATAAAGATTTGACTATTCTAAAGTTGATACTGACCTCTGGGTTGTATC CTCAATTTGCGATAAGCGATGAATTTAATAATATGAAAGGCTCGGGAGCA GACCAGCTGTTTCATACTAAGGMAGGMTAATCATTTAATTAATCAACTAT ATCAAATGTTTGTATAAATAGGTGAAGCCCTTCAATGTCCTACATCCTAA CTCCTACTTTTCCAATAATCCTGAATTCATTTCCGTTGATGGCCTGGACA TCGTGTCCGTCCCTGGCTTTCCATCTAAATATTCAGTTAGTGCCAAGCAC CAAATCCTAATCTATATGTCTCTTCTCGAAACCACTAAGTCCTACATTAT GAATCCATTGCGTATGCCAGCTCTTCCCACTCTACTTTTGTTTTCAAAGA CCATGGATACAGATAAATACATTTCTAGAATAGTTTTTGATTCGTGGATT GAACTACGATTTCCAAATCCATTGATGTCTCAAAACCAAGTTGTCATTTC ATTTATACTGAGAGACTCATGGAACAAATTACTCAAGTCTAAATTAGAAT CTGATAGAAATGACAAACATTTCCAGGATGATCTGAAAAGTGATGGCTTC ATTCTTGGTGATGATTTAGTTGACTTCATTCATCATAGTGAAATGAATTT CTCAATCAGAAGACTTTTACCTGGAGACATCAAGGTACTATATCGACCTA ATAATTATGAGAAAGTGCCAGAATCTTTGGTCAACCCCTTCGTGGGTGAA CCTAAAATAAATAGCCAAAAAGGTGGTATTCAGTTGAATGATGTTCTTAC ATACGACTGCATTGAATCCCTTAATGACAATATTGCAGAACTAACTTCCA ACCCTAGCTGTGTGTATTGTGATGAAACTTCTTATTCACACACACTTGAA AGAATGGAACATTATAGAGTTTGTTGGAAAAATAACGCATCAAAAAGAAA AGAAGGTATAAATAGGAGCAATGTCGAAGGAGGGGAGTCATCATCAAATA ATAAAAATGGATACTTTTGTGATGATTGTTCTAAACTCTTACACTTGKCG TCCACTGGCATACTTAGACATAAACAAAAGCATCGGCAAGAGAAGGAAAA AACATAA
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