EMLSAT00000009105, EMLSAT00000009105-704952 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009105
Unique NameEMLSAT00000009105-704952
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s573supercontigLSalAtl2s573:267932..269786 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009105 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009105EMLSAG00000009105-691871Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000040432EMLSAE00000040432-749360Lepeophtheirus salmonisexon
EMLSAE00000040433EMLSAE00000040433-749361Lepeophtheirus salmonisexon
EMLSAE00000040434EMLSAE00000040434-749362Lepeophtheirus salmonisexon
EMLSAE00000040435EMLSAE00000040435-749363Lepeophtheirus salmonisexon
EMLSAE00000040436EMLSAE00000040436-749364Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775592auto775592Lepeophtheirus salmonispolypeptide
EMLSAP00000009105EMLSAP00000009105Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009105

>EMLSAP00000009105 ID=EMLSAP00000009105|Name=EMLSAP00000009105|organism=Lepeophtheirus salmonis|type=polypeptide|length=363bp
MDIDTNIEIPAEKANVLKGHNEEAFKCAWNPMQDLLVSGSADSTARIWHM
EDSQQWDIILKHGKGREDCYIPCTTDVTSLDWNSSGSLLATGFYDGIARI
WSTTGKLEKTLGKHKGPIFGVKWNKSGNYILSASEDRTTIIWDSQTGNHN
QQFAFHSAPILDVDWQTDESFASCSKDKCIHVCKLGVEKPIKSFYGHTNE
VHSIKWDPQGKFLASGSNDTTLKVWCMDKESHVHDLKAHSKAIYTIKWSC
TGPGTNNPNADLVLVSASYDSTVRLWDVERGSCLHTLTRHQETVSSVAFS
PDGKFLASGSYDKFVYIWSTVNGKLVRCYKGTGAIYEVCWNYRGDKVGAC
ASDGNVFVLDLRR
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mRNA from alignment at LSalAtl2s573:267932..269786+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009105-704952 ID=EMLSAT00000009105-704952|Name=EMLSAT00000009105|organism=Lepeophtheirus salmonis|type=mRNA|length=1855bp|location=Sequence derived from alignment at LSalAtl2s573:267932..269786+ (Lepeophtheirus salmonis)
AGTCACCTAGGTCTAGACTATATATACAGGGACTCTTGTACTCCCTGTAT ATTAATATACTATTAGTGATGCAATTTTTGACTATTTCAATGAAAATTAC GAGCTAGTCATAAGTAGAGCGTTAGTCTGAAAACAGCAGATACAGCAACT CGAAAAAAGATTCTACCTTATTTTGAGATATCACTTCAAATATGTATTCT TTATCTCTCAAATATTTGATGGTATCTCATAAGAGGTAGAAACAGGAAAA ATAATACAAACTTATATACTTCATAAGTCATCTCCCGTCGAATCTTTGAA AATTAAAGATCGGTAACAGACTCTTTCAGCTCCTTCTGACGATCACCTAC AGCATCAACATCCCATGGACATTGATACGAATATTGAAATTCCAGCTGAA AAAGCAAATGTTCTCAAGGGGCATAACGAGGAAGCATTTAAATGCGCTTG GAACCCAATGCAAGATTTATTGGTCTCTGGTTCTGCGGACTCCACTGCTA GAATATGGCACATGGAAGATTCTCAACAATGGGATATAATTCTTAAGCAT GGAAAAGGACGAGAAGTAAGAAAAAAACATTTATACATTATATATCGATA AAGTAAATTAAATCTACATCTTTGGATCAGGATTGCTATATACCTTGCAC AACGGATGTAACATCTTTGGATTGGAATAGTAGTGGGAGTTTATTAGCCA CAGGGTTTTATGATGGGATCGCTAGGATTTGGTCTACAACTGGAAAACTG GAAAAAACCTTAGGCAAGCACAAGGGTCCTATATTTGGAGTGAAATGGAA TAAAAGTGGAAATTATATTTTAAGTGCAAGTTAGAAGGATTTAATCTGTA ACCAGAGAGACATGGAACTCTTTCTTAATCATAACTTTGACCTTTAGGTG AGGATCGTACTACCATTATCTGGGATTCACAAACTGGAAATCATAACCAG CAATTTGCTTTTCATTCTGCTCCTATTTTAGATGTTGACTGGCAAACGGA TGAGAGTTTTGCATCTTGTTCAAAGGATAAATGCATTCATGTGTGTAAGT TGGGTGTGGAAAAACCTATAAAGTCCTTTTATGGACATACCAATGAGGTA ACTCGATCCTTTTAATATTGTTGACTTTTTTGAAAAAGTATTTATTATGA CAGGTACACTCAATCAAATGGGATCCTCAAGGTAAATTTCTTGCGTCTGG TTCCAATGATACGACATTAAAGGTTTGGTGCATGGATAAAGAAAGTCATG TACATGATTTAAAAGCTCATTCCAAGGCAATTTATACCATTAAATGGTCA TGTACGGGACCAGGAACAAATAATCCAAATGCAGATCTTGTATTAGTATC AGCCTCATATGACAGTACCGTTCGTCTATGGGATGTGGAACGAGGATCAT GTCTTCATACCTTAACAAGACATCAAGAAACAGTGTCCTCAGTCGCATTT TCCCCAGATGGAAAGTTTTTAGCCTCTGGCTCCTATGACAAATTTGTATA CATTTGGTCTACGGTCAATGGTAAATTAGTACGTTGCTACAAAGGAACTG GAGCAATTTACGAGGTGTGTTGGAATTACCGTGGTGATAAAGTAGGAGCT TGTGCTTCTGACGGCAATGTATTTGTTTTGGATCTCCGACGATGAAATAA TTTTCAATCTTTCTATGTATATCAGTTATTCATTCCTATACAATAATCCT CCTTTTTAAACCTCTTGGAATGCAATGTTTCCTCGTATGTCATTTTAAAT GAGCATTAAGATGAATTCTTATGTATCTGCATATCCTTAATATCAATTTC TTCTTTAAATTTTTTTTTCTTATAATTAAACAGAAAATAGACTTGGATAA AATAT
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