EMLSAT00000009118, EMLSAT00000009118-704965 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009118
Unique NameEMLSAT00000009118-704965
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s574supercontigLSalAtl2s574:479854..481480 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009118 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009118EMLSAG00000009118-691884Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000040487EMLSAE00000040487-749415Lepeophtheirus salmonisexon
EMLSAE00000040488EMLSAE00000040488-749416Lepeophtheirus salmonisexon
EMLSAE00000040489EMLSAE00000040489-749417Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778033auto778033Lepeophtheirus salmonispolypeptide
EMLSAP00000009118EMLSAP00000009118Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009118

>EMLSAP00000009118 ID=EMLSAP00000009118|Name=EMLSAP00000009118|organism=Lepeophtheirus salmonis|type=polypeptide|length=254bp
MMSNPTFKLASYNVHGWSDANYEENCERVAALIQKYDIDLVGFQESQGDD
FGKVKSLLPAHEYVVDRTWNTSVLSRFPICDVTPGAKKFGGVRHNVVTSK
IGNVLVHIVNVHFNHVSEERRLHELSYLKKTLQPLLSDARALQIWLGDFN
ALTREDYNLEEWNNLSLVRANNRWESPQVEFMNHFRGELGLIDIWAECGS
PRPLGTCRFDTRIDYILASTSFLAHFNIIKFDIVDSNASDHRMIYITXQP
KIAT
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mRNA from alignment at LSalAtl2s574:479854..481480+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009118-704965 ID=EMLSAT00000009118-704965|Name=EMLSAT00000009118|organism=Lepeophtheirus salmonis|type=mRNA|length=1627bp|location=Sequence derived from alignment at LSalAtl2s574:479854..481480+ (Lepeophtheirus salmonis)
AAAAAGTACATCTTCAAGGCAGTCTATTACCATTTTCCAAGAATTATATA
ATTAATATAATCGCTGATTACAGAATATTGATGTAAAATACCATTGCTAT
ACTCTCTAGTTGTGCGTTTTTTACTAGTTTTCCCTGAAAATTTAATAAGT
TATCTTAATTGTCACATGTTGGAAAAGTATAATGATGTCAAATCCCACTT
TTAAACTTGCAAGTTACAATGTACATGGGTGGAGTGATGCCAATTATGAG
GAAAATTGTGAAAGAGTAGCTGCTCTAATTCAAGTGAGATTATTTTACAA
TTAAGTTAATAAATAATAATGTTATTACACTATTAAAAGTTTACAAGAGG
TTGTCATGATTTTCCCACTCAGTAATTCGAAAGTTGCGTAGATGATATTT
TGTTGGGGAAACTTGATCAAATTTTGATTTCTATATATTTCAGAAATATG
ATATCGATCTCGTAGGCTTTCAAGAAAGTCAAGGAGACGACTTTGGAAAA
GTAAAGTCCCTGCTTCCTGCTCATGAATATGTTGTTGATAGGACTTGGAA
CACAAGTGTTTTAAGCCGTTTTCCCATTTGTGATGTTACTCCAGGGTTTT
TACTTTCTAATTCTCCAATCAAGTAGTAATTATATAAAATTTGTCATATT
TTAGGGCAAAAAAATTTGGTGGCGTTAGACATAATGTTGTTACATCCAAA
ATTGGAAACGTTCTAGTCCATATCGTAAATGTTCATTTTAACCACGTTTC
TGAAGAAAGAAGGCTACATGAATTATCATATTTAAAGAAAACACTTCAAC
CATTGTTGAGTGATGCAAGAGCCCTTCAGATATGGTTAGGTGATTTTAAT
GCTCTTACAAGAGAAGACTACAATTTAGAAGAATGGAACAACCTTTCTTT
GGTTCGTGCTAACAATAGATGGGAATCTCCTCAAGTAGAGTTTATGAATC
ATTTTAGAGGAGAACTTGGCTTGATTGACATTTGGGCAGAGTGTGGATCT
CCTCGTCCTTTAGGAACATGTCGATTTGACACAAGGATTGATTATATTCT
AGCTTCCACGAGTTTTTTAGCCCATTTCAATATAATTAAATTTGATATAG
TTGACTCAAATGCCTCAGATCATCGAATGATTTACATAACRGRCCAGCCA
AAAATAGCCACTTAAGATGAAATACATTGGCAAATTCTATCATTCTTTTT
ACATATTCAAATAATTCAATTATTGTTTTAATATATAATATCAGTTGTCA
TTCAGCTATGGCTCTAACTTGATTGAATTGAATTTAAGGATTCTTGAAAA
TATATTTCCGTATCTTAATTTTAATTATTTTATTACTCTATTTTTCCATT
ACCATCGACATCTTGGATTCTTTTTTTCATTATTGAGTTATGTAATCATT
TATGTAATTGTTGAGTCATCAAAAATAGTTTTATTTCATTTCAATGATGT
TTTTAATTTCCTTAAGATCATGGAGGGTATTAAATAATAATAATGAAGTT
GGAACTACATAAGTAATAACTTGAGAATATGCATGTATCTTAAAACTGTA
TTGATATTTTATAAAAGTTTTTATCATCTATAAAAGAAAAATATTTCAGG
AGTCCCATGAATAAACCTATATCAAAA
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