EMLSAT00000009211, EMLSAT00000009211-705058 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009211
Unique NameEMLSAT00000009211-705058
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s586supercontigLSalAtl2s586:131335..134460 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009211 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009211EMLSAG00000009211-691977Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000040869EMLSAE00000040869-749797Lepeophtheirus salmonisexon
EMLSAE00000040870EMLSAE00000040870-749798Lepeophtheirus salmonisexon
EMLSAE00000040871EMLSAE00000040871-749799Lepeophtheirus salmonisexon
EMLSAE00000040872EMLSAE00000040872-749800Lepeophtheirus salmonisexon
EMLSAE00000040873EMLSAE00000040873-749801Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772916auto772916Lepeophtheirus salmonispolypeptide
EMLSAP00000009211EMLSAP00000009211Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009211

>EMLSAP00000009211 ID=EMLSAP00000009211|Name=EMLSAP00000009211|organism=Lepeophtheirus salmonis|type=polypeptide|length=198bp
MRVKKKVLQEDVGSGRSIFPWYFPFLPQWKGVNIGGEFNTIKSPEDVGFF
MTRAFSSLLISNIGWLIVHILFWRGTVTRSDELQFPFNIITLFFGSNDSG
DSDELLLPNSEGEINGNDLINFYTDPKVATQNLIISGGFTLFTLLLWIIP
TFFWSGRPLPTKNTDSRVSRLYNIIDHVRSGGNSVDIYNRLLCPQFFR
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mRNA from alignment at LSalAtl2s586:131335..134460+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009211-705058 ID=EMLSAT00000009211-705058|Name=EMLSAT00000009211|organism=Lepeophtheirus salmonis|type=mRNA|length=3126bp|location=Sequence derived from alignment at LSalAtl2s586:131335..134460+ (Lepeophtheirus salmonis)
AAAAACTTCATAAATCAAAATCCTAAAAATTTATTTTTTAAAGGCGTGCC CGAAAGCAACGGGGGAAAAAAGAAACCATTTGATAAAAATGAAACCCTTA TTTCGATGGAGGCTCATTTAAATACAAGACATTTAAGAAGACTGAAGCTA TTTAGATCCAACATACATAAATAACAACGCTGACATGAATTTATCTGTGC TCCTTCTTGTTCTAACAATTCTTGGTGTTCCTCTATCTATTACTTTTGGT AATGAGAGTGAAAAAAAAAGTGCTTCAAGAGGATGTGGGATCTGGGAGAT CCATTTTTCCATGGTACTTTCCGTTTTTACCCCAATGGAAAGGAGTGAAT ATTGGAGGAGAGTTTAATACAATTAAATCCCCCGAAGATGTCGGGTTTTT CATGACTAGAGCTTTTTCTTCGGTAATAAATACTTGGTTCATTTTAGATC TCAAATATAATGCCTGAAGGTATTATTAAATTTTATGTCTTTTTGGGGGT TGGATTAAGGTCCCTTCACGGCTGTTTTATTGTTGTGTATATTATATTAT GACCTCTATTTTGACGAGTGAAAATGTAAAAAATAAATACAGTACCTATT ATAAAAAAGAGATTTTCCTCCTTAGGATAAATTTAAATTTCCCTCCTTAA CAAAAAAGAAAAGAAAAATAGAAAATATAAATAAATATAGGTATAAAGGG GGACGATTTGTTTTTTCTATAACATCCTCATGTCAACTCATTCGTTATAT GTCGTGCGTCAACATATAAACAATCTCGAACAAAAATTAAAGAGAATATT TCAATATATATATATAGTAAGTTATAGATTTATTATTCAAATAATGGATT TGAATAGATATTCAAGAATTTGGGCTATAGTTTAGACCCTTTATTTAATT TATGAGACTTATATTAGCCCCATATGGCCCCTATCAAATAGAATCTATCA ATTTATGTGTATAAATATCTTTTATTTTGACGATACATTTTGAATGCTTT AAGGGGAATTGGCGGSACACCCAAAGGGKGTTTGTTGATAGAAATTGACA ATAATTTGTTGTCCAAGAATATTAATGTAATTTACACTCTATTTCATTCT ACCTTGCTTTTGTGTTGACGGGTCCATTATCCTTAATACTTAATTATAGG TATATGTATTTCTATATACAAACATATTTTTTTACTTCATAAATATTTTG TAGAAGCAAAATACACTTTTTAATTATACTTAATTAATTGCAATAATTTG ATATAATTTTATGTGATCTCTGTTAATAATCACACGTTATGAATACTTAA TAAGAATTCTCTTAAAATTGATTAATTACATTCTTTTTTTAGTTGCTCAT TTCAAATATTGGATGGCTGATTGTCCACATTCTTTTCTGGAGAGGAACAG TAACAAGGAGTGATGAACTTCAATTTCCCTTCAATATTATTACTCTCTTT TTCGGTTCAAATGACTCCGGGGACTCGGATGAGCTGTGAGTAAAAAAAAT GTTGAAATAATAGTTCATTTTTAAACTTTATTTTTTTTAAATCACTGATT AGGCTTTTGCCGAACTCAGAGGGGGAAATTAATGGAAATGATCTCATTAA CTTTTACACGGATCCCAAAGTAGCAACTCAGAATTTAATCATCAGTGGTG GGTTTGTAAGTTATTTTCATTCAACCCCAAAGAGTATTGATTACGCATGA TTTCCACAAACTATTTCAGACTTTATTTACGTTACTCCTATGGATCATTC CAACATTCTTTTGGAGTGGTCGACCCCTGCCCACAAAAAATACTGATTCT CGTGTATCACGTTTATATAACATCATTGACCATGTTCGTAGCGGAGGGAA CTCTGTGGATATCTACAATAGACTATTGTGTCCGCAATGTGTATCCGTGA TTATATCTATCAACGTTCTTTTGGTATGTTAGATCCTAACCCATTGTCGG GGAACAGTGGTAAATTACCCCAAATTGACTAATATTTAAAATTTTAGGGG TAATGGGAGTACTACTTCCTACTGGTAAATGAAATAAACACAGCAGGGGT KKYTACAGGNTGGCTGTARKCCCCCCCCCCCCCATCCTAAAAACAATTAA GGAATTTTTGCTTTTTTACTAGATTTTTTATTTGGTCAGGCTGAAAAATT TTTACGCAAAATTAGAGGTAAAATTAAATTTTTTATGAATTCCTATGGAT CTTTGAAATTTTATTCCAAAAAATTTATGTCTGAAATTTTATTTTTGAAA TTTTATTCCAAAAATTATTTTTCAGTGAATAACTGTAGACTTTTGAAAAT TTTTTCCAAAAACTTAGATTTAAAAAAAAAAAGATTTCTGAATTTAATTC TTCAAATTTTTTATCTGCAAAATTTAATTTTTCAATTTTTTATCTGCAAA ATATTTAACTTTTCAAATTGTTCTACAAAACATTTAATTTTTATGTATAG GTATGGATTTTTGAAACTCAAATTCAAAAATTTTTATTTATAAAATTTAG TTTTGAAAATTTTTTGTGCACAGCTGTGGATTTTAGTAATTTTTTGTGTA CAGCTAGGTATTTTTGAACAAAATACAATCCTGCTGATTATTCTGCCCTA TTTTGGGGTAAATTACTTTTACTACAAGTTCTTTTGGGGTAACGCTAAAA CGTGATATCCTAATCCATCTCTTTTGTCTTTTTTTATGTCCTTTATTTAT TAACAAATAATAAACCGATTATATAGTTTTTAGGTAAATGGATTTTTGGT CTGTTTTGAGTGAATTACCAGATTCTCCTGCTTTTGGAGTTCCAAATGAT GCAAGTCGTAGCTTGAAGGACGATGATGAGTCTTTGGGCATGGCTCTTTT ACATGATGCTATTGATAACTTTTTGAACACTCTGGATGTCAATGTGAACA ACATCATCAAAGATATCGAGACAAGAGATAAGCAATATGTATAGTAGTTA GCTAAACAACTTTATAGGCTTTATTCAATTTATATTAAATTTTTGCATAT TGCATAATGTATATAACAAATAGTTTATAGATAATTAATTAATTAGCATA AAAAATTATACAGTTAACAGAAGCGTTTTTGGAATTTTTTGTTAAATTTT GTTAAAATATATATTCAAAATTCCAA
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