EMLSAT00000009276, EMLSAT00000009276-705123 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009276
Unique NameEMLSAT00000009276-705123
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s592supercontigLSalAtl2s592:24186..25873 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009276 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009276EMLSAG00000009276-692042Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000041165EMLSAE00000041165-750093Lepeophtheirus salmonisexon
EMLSAE00000041166EMLSAE00000041166-750094Lepeophtheirus salmonisexon
EMLSAE00000041167EMLSAE00000041167-750095Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769650auto769650Lepeophtheirus salmonispolypeptide
EMLSAP00000009276EMLSAP00000009276Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009276

>EMLSAP00000009276 ID=EMLSAP00000009276|Name=EMLSAP00000009276|organism=Lepeophtheirus salmonis|type=polypeptide|length=271bp
MGYGLFLSVLLFVLSGTESSLREKSELKGNVNVEDILNECDSYDKEHAES
RIHFPQELSVLGYVTPRRSRKIGDILSEFCMANDLDGVVLEVWSQLGGQA
RKELSDVLKIISKVIRGNNKLVVLVIPPAVYDTDNKKKGFFEKNDFEGLA
HSFDYFSLMTYDYSNPYRPGPNAPLAWVRKCIELIDPEDGGRHVVHHEYK
SILKESPNAELQWNDEVAEHFIELKYEGKKNTIFYPTLKSIAMRIELAKE
LGTGISIWEIGQGLDYFYDLF
back to top

mRNA from alignment at LSalAtl2s592:24186..25873-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009276-705123 ID=EMLSAT00000009276-705123|Name=EMLSAT00000009276|organism=Lepeophtheirus salmonis|type=mRNA|length=1688bp|location=Sequence derived from alignment at LSalAtl2s592:24186..25873- (Lepeophtheirus salmonis)
ATGGGTTATGGGTTATTTTTGAGTGTTTTACTATTTGTTTTGTCAGGAAC AGAGTCATCATTACGTGAGAAGTCCGAACTGAAAGGGAATGTGAATGTGG AGGACATTTTAAATGAATGTGATAGCTATGACAAGGAACACGCTGAATCT CGTATACATTTCCCACAAGAGCTCTCAGTTTTAGGCTACGTGACTCCGTG GAATTCCAAAGGATATGACGTGGCTAAGATATTCAAATCCCCGAAAATTA ATCTAATTTCCCCTGTATGGATACAGCTCCATCCAGATCTAACTCTTGAG GGACTCCATGATATAGACAAAAGTAATCACTTTTCTCTTTCCACCTCAAA AGGGGCAACTTGAAATTCATTCCTTGCAACCTTTTCATAAGTAGGGAAGA ACTTTGCGAAGCAGATGGAAAGGGTCAATGTCGACTCTTTCGAGTTCTTC GGACAGTTCACACCAAAGGAATTTTGAAAGGCTGAAATACTCATGTTAAA ATGATATGCACAAGAAAGAGTCGCTCTGCCTTATATACTATTATAAATGT GCTTTATTCGGAGATCCTTCTTCAGTCCACGAATCCAATCCAAGCCCCCT CCCCAACAAAAAGACGATCTCACAACCTCATCTAAATAATCAGACTTTTA AGATCCTCCATATTGCTACTTGTCCGAATAACTCGAAAGAGTCTGGATCC TTCTCCTACATCAATAATATATCATTCGCGTCGCTTGGCTTTACTTAGCC ATAAAAAGTTATTTTCTTATTACTAAAAGGTTGCGATGATGGATTTTCAA CATTCCATTTACTCCGTCTCCAATTTTAAGGATAAACGGATGAAATAGGA AGTGCGGGAAAACTTGTAAACTATCCTCAAAATGAATTAAATATTTTTAT TACTTATTTTTTAGATTGGATCAAAGAACTTCGCCCATCCAAGGTTTTAC CTCGAGTCATCTTTGATAAATGGGAAGCAAAGGACTACATGGAATTATTT CAAAATAGACGCAGGAGTCGAAAAATAGGCGATATTCTATCCGAGTTTTG CATGGCTAATGACTTGGATGGAGTCGTTCTTGAAGTTTGGAGTCAGCTTG GAGGACAGGCTCGAAAGGAACTTTCGGATGTACTCAAAATAATATCTAAA GTAATTCGAGGAAACAATAAGCTTGTTGTTTTAGTCATTCCTCCAGCAGT TTATGATACTGATAATAAAAAAAAGGGATTTTTTGAGAAAAATGACTTTG AAGGTCTTGCTCATAGCTTTGACTACTTTTCACTCATGACCTACGATTAC TCTAATCCATATCGTCCTGGACCGAATGCTCCACTTGCCTGGGTGCGTAA ATGTATAGAACTCATTGATCCAGAAGGTGTTCATCGCTCCAAAATTCTTA TGGGTCTCAATTTTTATNNNNNNNNCATATACTGCAGATGGTGGTCGCCA TGTTGTTCATCATGAGTATAAAAGTATTTTGAAAGAGTCTCCCAATGCGG AGTTACAGTGGAATGATGAAGTTGCAGAGCATTTTATTGAGTTAAAGTAT GAAGGGAAGAAAAATACAATATTCTATCCCACATTAAAGTCAATTGCAAT GCGGATTGAATTAGCAAAAGAGCTTGGAACTGGGATTTCGATTTGGGAAA TCGGGCAAGGACTTGATTACTTTTATGATTTGTTTTAA
back to top
Add to Basket