EMLSAT00000009337, EMLSAT00000009337-705184 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009337
Unique NameEMLSAT00000009337-705184
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s596supercontigLSalAtl2s596:9119..11742 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009337 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009337EMLSAG00000009337-692103Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000041423EMLSAE00000041423-750351Lepeophtheirus salmonisexon
EMLSAE00000041424EMLSAE00000041424-750352Lepeophtheirus salmonisexon
EMLSAE00000041425EMLSAE00000041425-750353Lepeophtheirus salmonisexon
EMLSAE00000041426EMLSAE00000041426-750354Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768874auto768874Lepeophtheirus salmonispolypeptide
EMLSAP00000009337EMLSAP00000009337Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009337

>EMLSAP00000009337 ID=EMLSAP00000009337|Name=EMLSAP00000009337|organism=Lepeophtheirus salmonis|type=polypeptide|length=528bp
MSGYCGVCSSYVRRGESSYSVTGDRTSLSNDYWPEMSEFDSTICHLCESP
SFPSWRDKISHYLKSHSTQLPFICPIDNESLTDPFDSHFIDDHGFEEWTS
DFSFFKLIGETETSLQADHEQCPKCGLICTTEMAFLYHSTFNHKVDPEPF
NNCLFCPNVSSDLKDLITHVLKSHCGMMFSLNSDKGDTFDLEQCLDTPEK
FLCDMLKTKNEENVFQENDDLNQTKLEEILREYLETLTQIPNEINDDSEG
DAWDINKLNRILDDPRTEENIQVMGEKKCFSCELEFETHMEKICHRSQIH
SPIEGPTYQCNFCLESFSLESKATQHMFEEHGYSTLHPWYLSQGLITNSE
DKISLGNGSFQCCICGLNCSSDTNFLIHKISSHSSNNKEYDCDYCFEKYP
SKSNLRLHVLIGHGSYKYQCPVCSLTFDESVEFCEHVDNEHIMNKFDHQT
ESCSSEKKKVLTCDLCLLNVRGPRTLSKHMHSIHGITLDFDCKKCGKLFE
TQEILDTHIASIHGGNPNPKDFICEKCS
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mRNA from alignment at LSalAtl2s596:9119..11742-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009337-705184 ID=EMLSAT00000009337-705184|Name=EMLSAT00000009337|organism=Lepeophtheirus salmonis|type=mRNA|length=2624bp|location=Sequence derived from alignment at LSalAtl2s596:9119..11742- (Lepeophtheirus salmonis)
CGCTGACTGACAAAATGAGTGGTTATTGTGGAGTGTGTTCCTCGTATGTA
CGTCGAGGAGAGAGTTCCTACTCTGTGACCGGAGATCGTACATCTCTTTC
CAACGTGAGTCTCCTCTTTAAAGTATTCGCTATTCTAGGACTCGAGCACA
GCAACGACGGAATCATTTGCTACTCCTGCTATGAACTCATCGAGGAAATT
GACTTTTTTGAGCACAATGCGGGACTTTCCAAGGAGANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNATATTCATTACTCGAATCGGATCCTTTATTA
AGGCATTTAATACTCAGCACATATAATTAATGGCCGCACAGTCTAATCCG
CCTAAGAGCAATAACACCTCAGTTTCAACGAAAATGTAAATTCACGTGAT
TAAAAAATACATAGATTAGATTTGTATTCTTTATCTAATTATCTTATATT
TTATTAATCATTCGGAGGCGGCCCCTTGAATTGGAATTACTTTTAAAGAT
CGTACAAATTATCGATCAGTTATTGAAAAAAAGAACAAATATTTACACTT
GAAAGGCCCTAAACAAAGTCTCATATATCAAATCAAGACTCGATAAACTA
TCTAATACTACTAGGTGTATCAATCCGTCCCTGAAATAAGAATATAACGT
CTATAATTGGGCGAAATAAGTCAACGGAACTAATGTGTGTTATATTTATT
AAGCATAACAATACAATTTCTTGATTTTTTATTCAAGATTGCTTGCCGTT
TATGAATGAAAAAAATATTTTCTATGAGAAGGTTGATCTTATTCGGATTT
GACTGTACATATTACTATGAGCTATAAACTGATCGGATTTTTTAATTTGG
TTAATTTAGATGTCCTCAGGATTACTGGCCAGAAATGAGCGAATTCGATA
GCACGATTTGCCATCTCTGTGAAAGTCCAAGCTTCCCTTCATGGAGAGAT
AAAATAAGTCATTATCTCAAATCTCATAGCACTCAACTTCCTTTTATATG
TCCAATTGATAACGAGTGTAAGTATTTTTAATAAATTGTAATACTAATTT
TTATTTAATTAATTTATATTTTTTAAAGCCTTGACCGATCCCTTTGATTC
TCATTTCATCGATGATCATGGATTTGAAGAGTGGACATCAGATTTTTCCT
TCTTCAAATTAATCGGAGAAACTGAGACTTCCCTTCAAGCTGATCACGAA
CAATGCCCCAAGTGTGGCCTAATTTGCACAACTGAAATGGCCTTTCTGTA
TCATTCTACGTTTAATCACAAAGTGGACCCAGAGCCATTTAATAACTGTC
TGTTTTGTCCAAACGTATCTTCAGATTTAAAGGATTTAATTACTCATGTA
TTAAAAAGTCATTGTGGAATGATGTTTAGTTTAAATAGCGATAAGGGTGA
TACTTTTGACTTGGAACAATGCTTAGATACACCTGAAAAATTTTTATGCG
ATATGTTGAAGACCAAGAATGAGGAGAATGTATTTCAAGAAAATGATGAT
CTCAATCAAACAAAGCTCGAGGAAATCCTTAGGGAATACTTAGAGACTCT
AACTCAGATACCAAATGAAATAAATGATGATTCTGAAGGAGATGCTTGGG
ATATTAATAAATTAAATCGGATTCTTGATGATCCTAGGACTGAGGAAAAC
ATTCAAGTCATGGGCGAAAAAAAGTGTTTTTCTTGCGAATTGGAATTTGA
AACACATATGGAAAAGGTATTGTAATAAGAAAATGATTTAAAAAAAAAAG
TTTTAATTTTTTTTAGATATGTCATAGGTCCCAAATACATTCTCCAATCG
AAGGTCCAACTTATCAATGCAATTTTTGTTTAGAATCCTTCTCACTTGAA
TCCAAGGCTACACAACATATGTTCGAAGAACATGGATACTCGACTCTGCA
TCCCTGGTACCTTTCTCAAGGTTTGATTACGAACTCTGAGGACAAAATAT
CCTTGGGAAATGGAAGCTTTCAATGTTGTATATGTGGCTTAAATTGCTCA
AGCGATACAAATTTTCTCATTCATAAAATATCTTCTCATTCTTCTAATAA
TAAAGAGTACGACTGTGATTACTGCTTCGAAAAATATCCTTCTAAATCAA
ACTTGAGACTTCATGTTCTTATTGGCCATGGAAGTTACAAGTATCAGTGC
CCTGTTTGTAGTTTAACCTTTGATGAGTCGGTTGAATTTTGTGAACACGT
TGATAATGAGCACATCATGAATAAATTTGACCACCAAACCGAATCCTGTT
CTTCTGAAAAAAAGAAAGTACTCACTTGTGATCTATGTCTTCTTAATGTT
CGGGGACCTCGTACGCTTTCAAAGCATATGCACTCTATTCATGGAATAAC
ACTAGACTTTGATTGTAAGAAATGTGGAAAGTTGTTTGAAACTCAGGAGA
TTCTAGATACTCATATTGCAAGCATTCATGGAGGGAATCCGAACCCGAAG
GATTTCATTTGCGAAAAATGTTCG
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