EMLSAT00000009378, EMLSAT00000009378-705225 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009378
Unique NameEMLSAT00000009378-705225
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s59supercontigLSalAtl2s59:501589..502214 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009378 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009378EMLSAG00000009378-692144Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000041672EMLSAE00000041672-750600Lepeophtheirus salmonisexon
EMLSAE00000041673EMLSAE00000041673-750601Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778217auto778217Lepeophtheirus salmonispolypeptide
EMLSAP00000009378EMLSAP00000009378Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009378

>EMLSAP00000009378 ID=EMLSAP00000009378|Name=EMLSAP00000009378|organism=Lepeophtheirus salmonis|type=polypeptide|length=124bp
MTSFSNKFNVSKQKSFEMWMWTLKSNILSGLKWTCHIRTLVTPVQKKGTR
VISKYILEYQRVFRENGPVKELVPLNALGYEKYIQVLRPENSIVDNIVNY
IYYKSAIQTPKYNALYKGIMKNDF
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mRNA from alignment at LSalAtl2s59:501589..502214-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009378-705225 ID=EMLSAT00000009378-705225|Name=EMLSAT00000009378|organism=Lepeophtheirus salmonis|type=mRNA|length=626bp|location=Sequence derived from alignment at LSalAtl2s59:501589..502214- (Lepeophtheirus salmonis)
ATGACGTCATTCAGTAATAAATTCAATGTAAGTAAACAAAAAAGTTTCGA
AATGTGGATGTGGACTTTAAAGTCTAATATACTTTCGGGATTGAAATGGA
CTTGTCACATTCGCACCCTTGTGACTCCCGTCCAAAAAAAAGGAACGCGA
GTGATTTCAAAGTATATTTTGGAGTATCAAAGAGTGTTTCGTGAGAATGG
TCCCGTGAAGGAACTTGTTCCTTTAAATGCACTTGGTTTTTTACACATTA
CTCCTCTATTCTATTCCCTACATAGTTTTACTTTGACTTCTATTATCATC
CTTATTTATTATTTGACAAGGAATTGTTTTTTAARGATTCTTATTTCACA
TTTTTTTATGAGTAATAATTGATAATGTAGAAATTCATTTAGTTGTGATT
GATAATTTATTATGAATGGAATTGAATAGAGAGGCTTATTAATACAATTA
TTTATTTACTTCTACCATCATCATTGTGATAATTAGGTTATGAAAAATAT
ATTCAAGTTCTTCGACCTGAAAATAGCATTGTCGATAATATTGTCAATTA
CATATACTACAAATCTGCAATTCAAACCCCTAAATATAACGCACTTTATA
AAGGGATAATGAAAAACGATTTTTAA
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