EMLSAT00000009389, EMLSAT00000009389-705236 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009389
Unique NameEMLSAT00000009389-705236
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s5supercontigLSalAtl2s5:1377738..1378415 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009389 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009389EMLSAG00000009389-692155Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000041736EMLSAE00000041736-750664Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780708auto780708Lepeophtheirus salmonispolypeptide
EMLSAP00000009389EMLSAP00000009389Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009389

>EMLSAP00000009389 ID=EMLSAP00000009389|Name=EMLSAP00000009389|organism=Lepeophtheirus salmonis|type=polypeptide|length=225bp
MKPEQNTNTDSTMKSSQKSRKIVWKLVLTGGPCSGKTTGQARLSTFFKDL
GWKVFCVPEAATVLLSGGVNFSELDAEAAMKFQENLLKTMIQIENSFFDL
AKESKQNCLVICDRGTMDASAYINHNQWENILTTNSLDEVELRDNRYNQV
VHLASAAKGAEQFYSLDHPSRNEGIELARDRDTRAAESWVGHPYVDLIDN
TSNFEIKIKKLIAIVAFRVGINVSV
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mRNA from alignment at LSalAtl2s5:1377738..1378415+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009389-705236 ID=EMLSAT00000009389-705236|Name=EMLSAT00000009389|organism=Lepeophtheirus salmonis|type=mRNA|length=678bp|location=Sequence derived from alignment at LSalAtl2s5:1377738..1378415+ (Lepeophtheirus salmonis)
ATGAAGCCGGAGCAAAATACAAATACTGACAGCACAATGAAAAGTTCTCA
GAAAAGTCGAAAAATCGTATGGAAACTTGTGCTCACAGGTGGCCCCTGTA
GTGGAAAGACTACTGGTCAGGCTAGACTCTCAACATTTTTCAAAGATTTA
GGATGGAAAGTTTTCTGTGTGCCTGAAGCTGCTACGGTTCTTCTCAGTGG
AGGAGTTAATTTTAGTGAACTAGACGCAGAGGCTGCGATGAAGTTTCAGG
AAAATTTATTGAAAACCATGATTCAAATTGAAAACAGTTTTTTCGATCTT
GCTAAAGAAAGTAAACAAAATTGTTTGGTTATTTGCGATCGAGGGACTAT
GGATGCATCAGCATACATCAACCATAACCAATGGGAAAATATATTGACTA
CTAATAGTTTGGACGAGGTTGAGCTCCGAGATAATCGATACAACCAAGTG
GTTCATCTTGCCTCAGCTGCTAAAGGGGCCGAACAATTTTATTCACTTGA
TCATCCTTCTAGAAATGAAGGAATTGAACTTGCAAGGGACAGAGATACGA
GAGCTGCTGAGTCTTGGGTTGGTCATCCTTACGTTGATTTAATAGATAAT
ACATCAAATTTTGAAATTAAAATCAAGAAATTGATAGCGATTGTGGCGTT
TCGTGTTGGAATTAATGTAAGTGTCTGA
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