EMLSAT00000009406, EMLSAT00000009406-705253 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009406
Unique NameEMLSAT00000009406-705253
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s5supercontigLSalAtl2s5:1566822..1570286 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009406 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009406EMLSAG00000009406-692172Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000041804EMLSAE00000041804-750732Lepeophtheirus salmonisexon
EMLSAE00000041805EMLSAE00000041805-750733Lepeophtheirus salmonisexon
EMLSAE00000041806EMLSAE00000041806-750734Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780823auto780823Lepeophtheirus salmonispolypeptide
EMLSAP00000009406EMLSAP00000009406Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009406

>EMLSAP00000009406 ID=EMLSAP00000009406|Name=EMLSAP00000009406|organism=Lepeophtheirus salmonis|type=polypeptide|length=126bp
MNYTTCKSVAIPPTTNKIEEDGDDVDLFGSSSDEENTQIKFVFTRSTSKS
DFDCTDLLEVKPWDDETDMSTILANCKTIQKEGSVLSAHELLLRERRRLT
LRICCEAISESPGCTRSRIEDRHQSD
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mRNA from alignment at LSalAtl2s5:1566822..1570286-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009406-705253 ID=EMLSAT00000009406-705253|Name=EMLSAT00000009406|organism=Lepeophtheirus salmonis|type=mRNA|length=3465bp|location=Sequence derived from alignment at LSalAtl2s5:1566822..1570286- (Lepeophtheirus salmonis)
ATGAACTACACCACCTGTAAATCAGTAGCAATACCTCCCACCACCAACAA
AATAGAAGAGGATGGTGATGATGTTGATCTTTTTGGAAGCTCATCTGACG
AGGAAAATACCCAGATAAAGTTTGTGTTCACGAGGAGCACTTCAAGTCTT
ATCATAAGAAGAAATCCCAGAATCCGACTTTGATTGCACAGACCTCTTAG
AGGTTAAGCCGTGGGATGATGAAACTGATATGAGCACCATTCTTGCAAAT
TGCAAAACGATTCAAAAAGAGGGTTCTGTCTTGAGTGCACACGAATTGCT
ACGTAATTATGAAGCTTTAAGTCATGTCAGTTGTCGATGATCACACATAT
TCATCGATGAGTTGTGTGAGGAAATTGCCGAGTCTGAAGATTTTGTACAA
TTTGTAGGTATGGGTACCATGTCCAAAATCTAAATGTATTTTTAGAATTG
TTGAGGAAGTGCTCCGTTTGAAATAGAATTATATCTTTTTCTTTCTTTTT
ATGAGACAAGAATACTCAAATATCAAGAACATTATAGAAATACAAAGAAA
TAAAAATATCATAAAATACTATTTAAAAAAAGTTGGGTTTATAAAACGTT
ATTACATTTACCACGTGATTATAAAGATAGGTGGGCATTTAAAGAAAATA
ACCAGGTTAGTATAAATTTTTTTTAAGGAGATTTGTGATATTGTTCGTAG
GCCCAGTAGAAAATAAAACTTTTAATGTGATTTTTAGTATTTATTGCAGT
ATTGTAATGCATCAAAAAATGAGAATTATGTGAAGTTACATTGTCAATTT
CATCTTTATATATAAGTGTTGTCATAATATCAATAAATTCATACAGGCCC
CGCTACAAATCTTTGGCTCGGTTATTATTTGGCGAAACTTCAATATTTTT
TTCAGTAGCAGTCTTTATCGGCCTTTTAATGGTGTGTCCTCTAATCAGCA
CCCCCAATAACAAAACTGTGACCATGACACTATTTTAAGGGGCGTCTGCA
GCTTTAATTTTGTTTCGGAGCTCATTGATTTTCATACTTTTTTCCATCAA
TATAATTTTCGTTGAGGACTGGAGGGTGACTTTGATATTGGTAAAAACTG
ATTAAGTAATGGACTGCTTGAAATACGAAAATGCCCATGAACCACTACAG
TACCGCTATACTAAACATTACTATTATATATGTGACTGTCAACAGAAAAA
GAATGTAGAATGATTTTTCTCAAATATACAAAAGGAATACAATTCACAAC
GTTTCTAATGATAATCTTTATTGTATATTGTTGCTTTGTGTTAACAAAAT
TAGACTATTCGTATAAAGTTTAATCTGTGTCAATCTCAAAAAATTGATCA
AATATTAAATCACTGTATTTGGCAAACTCTACGTACTTCAAAAAACAGAT
TTGAGATGAGCACATTAAATCATTTAGAAAAATGCTATAAAATTCGTCAT
GAGAAAAAAAAGTTTATTTTTGTTGTAGCAGTTCTGGAAAATAAAAAGGC
CTGTTTATATGACCGCTTTCTAAAACATCTTGTTTTATACAGAAGATTAG
TTTTGAGTAAGATAACCAACAGTTATCCTAGTTGGATTTAGAAGAAAAAA
CACAATCTTTTCAGTATACAAAAAATCTTCTAGGGAGTCATTTCAATTGC
AACTGATGTAATAATCTCTCACTTTTTCTTCAATATTCTTCCAGTTTGGC
CTTCATGTTTTACACMCCACGGCCAATGACTCTTTCTAATTTTGCAGTCC
CATTCTTGTTAAACTGTTTTTCATTTTCTTGATTTTGTTTCAAGATTGTT
CGTATGTTGATGATGTACTGAAAATATATTTACCCAAAAATAATTCTTAG
TTGGTGCAACACAATATTTTACTCTTCAAGACTAAGTAAATCACTTTGAT
AGAAAATACATACATACATAGATTTCAAATATCTGCTTTCACGAGGTTTT
CATACTGATAAATTGTTATTATTATTATTACATTTGTATTTATTCATTTT
GTCGCATTGAAGAAGTTATATGTATGCATATATAGTCATAGATTTGTAAA
GTGGATAAGAGCAAATTTTATATGTGTACAACATTGGTATTGTTGGATTT
TATTTATTTATAGTTATCTGCAATAAATTNNATACTGATAAATTGTTATT
ATTATTATTACATTTGTATTTATTCATTTTGTCGCATTGAAGAAGTTATA
TGTATGCATATATAGTCATAGATTTGTAAAGTGGATAAGAGCAAATTTTA
TATGTGTACAACATTGGTATTGTTGGATTTTATTTATTTATAGTTATCTG
CAATAAATTTGAAAGTGAATGAATTTTAATGTCTTGGATTTGAGAGTAAA
ATATTTACATCTAATTAGTAATTATACTGGGGTGTTGGGAAGTGTTGTTA
TATTTCAGGTCTAAGCAGAGTTGGGACCCAATGTTCGTATTAGCATTTAA
TTACTATTGTTGATTACAAACTTCATTTTTCAACCAAAGGACAGCTGAAA
CCTAAATAATCAATTTTTTTTATCCTATGTATATAAGTGTAAGAATGTCT
GAGTAACAAAAAAAGGTAACGAGTGTGCAGTCCTCTGCGCCGATGTCAGT
GCTGAGAAGACTTTAGAGACAGTTGCCCTCTCTATCTGGACTGCCTTCAA
CATCAGTAAGTCCATTCATGAGTGCCCCCTCCCATACAACCAAGAAGAAT
AAAAAATTATTCAGTAACAATATGACTGACTTCTGGCCTGCCTCCATGTG
GCACTGCTCCAGCCCTGACCTGAACCCCCTTGAAGTTTAGGCCGTCTTGG
TGAAGAATGTCTGCCGAACCTCCAAATTTGGATTTGGGTCCAGGAAGCCA
TCATGGAACGCAATGAAAACGGTCTCCATTGCCAAGAGTTGCCAATCTAT
TCGCCGGCGTGTCGATGCTATTATTGCTTTGATAGGACACATTGAATAAA
CAATATAGCTAAATGTAGCATTTAAACATATCACAAATTGGTTTGGAGTT
GTTTTTTTTTACTTCATAAAAATGACATTTTTTGTAATTAAGTCATGATA
CTGCAATTTTCTGGACTCTAATCTATAATTACTCTGTACGATATTTAAAC
TTAAAGCAACAAATATTTAAAATAAAATAGATTAATAACTTTAAGGAGGT
TTTGTTCTTGATGAAGTTTCGTGATAATGACATACATGCATTTCTGTCAT
TTATGAGTACACACACTCATTGTTATACTTTATACATAGATTTTCTTCCA
GTTGGCAATCAAATGAGGGTTTGTTTATTTTAAATTTTCTAAATCTGTTA
TCATTATTATTTAATTCTTGAAGAGAGAACATCCTACATATATATGTTTA
GTAATCACTAGTGCGTGAAAGACGAAGATTAACACTGAGGATTTGTTGCG
AAGCTATAAGTGAGAGTCCTGGTTGTACTCGTAGTAGAATTGAGGATCGA
CATCAGAGTGATTGA
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