EMLSAT00000009504, EMLSAT00000009504-705351 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009504
Unique NameEMLSAT00000009504-705351
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s6125supercontigLSalAtl2s6125:34..2816 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009504 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009504EMLSAG00000009504-692270Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000042182EMLSAE00000042182-751110Lepeophtheirus salmonisexon
EMLSAE00000042183EMLSAE00000042183-751111Lepeophtheirus salmonisexon
EMLSAE00000042184EMLSAE00000042184-751112Lepeophtheirus salmonisexon
EMLSAE00000042185EMLSAE00000042185-751113Lepeophtheirus salmonisexon
EMLSAE00000042186EMLSAE00000042186-751114Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto767901auto767901Lepeophtheirus salmonispolypeptide
EMLSAP00000009504EMLSAP00000009504Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009504

>EMLSAP00000009504 ID=EMLSAP00000009504|Name=EMLSAP00000009504|organism=Lepeophtheirus salmonis|type=polypeptide|length=399bp
STQILEVITLIFKDQSVSQLERILRELLGNPDLDDSYEENESNLSSSLED
ISMNEDSSDSYTHEKNGSKTIFNNCILPFRKFLQNNEGAPSNKMCGHNKH
STSINKTSSAELEETVKEMVNYWITTLPGDTKMDTEVSTESSSNDNDQCT
SVPQNKRIPIGPDVSASEKREIRRKKILKMVNDLMKKRREQSTVDDEGVS
RLLTEFTICFIMRGYGNIIGNLRLKLMTEPPTSTFTNMHSRFLWLITFFM
SFVEDLEVELPVIEAVFSPEIMSNIVFEGLHTLENLEIESNSDMHYDTVF
KIRQLHLVVSAIKQILITINLMEHNAYNTETRYKIHKIICLFMEMRNLRH
FHLLLIWKFNSSHQTRAFINDAIMSNHQLLVMFEKVESSDKFINEHLDQ
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mRNA from alignment at LSalAtl2s6125:34..2816-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009504-705351 ID=EMLSAT00000009504-705351|Name=EMLSAT00000009504|organism=Lepeophtheirus salmonis|type=mRNA|length=2783bp|location=Sequence derived from alignment at LSalAtl2s6125:34..2816- (Lepeophtheirus salmonis)
AGTACTCAAATTTTGGAGGTCATTACTCTGATATTCAAGGATCAAAGTGT
GAGTCAGCTTGAACGTATTCTTAGAGAATTGTTGGGAAATCCTGATTTGG
ATGACAGCTATGAAGAGAATGAGAGTAATTTGTCTTCTTCACTGGAAGAT
ATCTCTATGAACGAGGACTCTTCGGACAGTTATACTCACGAGAAAAACGG
AAGTAAAACAATATTTAACAATTGCATCCTTCCTTTTAGGAAGTTTTTGC
AAAATAATGAAGGAGTATTTAAAAAAAAAAAAAATGAAATTTATTTTCTT
AGAAAATGTCATATATAAAAAAAAATTAAGAAAATGTAATTTAAAATAAA
AATCCTAAAGGGTGTCAAAAATAAAATTTGAAATTCATTTTCTATTTGGA
ATTTTTTTCTTTAAATCCATAGCTATACACAGATAAATTTTTTGGATAAA
AATTTAAATATTAATTTTTTTTCAAAAAAATTATATCTTAAATTTTGCCG
ATATTTTTTTAAATCAACTACTATTTACTAAAAATTAAAGTTCAGTTTTG
TTTTTTCAAAAATCTACACCTGCTCACAAAATGTTAAGTTTTTTTGGAAA
AAAAATTCAAAAATCAACTGCTGTTCACAAAAATTAATTATTTATTCTGC
TCCATAATTTGCCCAAATTACCTTTTCNNNNNNNNNNNNNNNNNNNNNNN
NNNNNACACTTATGTCCGGTGTAAAAAATTTTCATCCTAATCAAAACAAA
AATTTAGAAAAAAGTAAAAATTCTTTAATTTGGGCAACCCCTCAGGTGTT
ACTCTACATAATTCATATGTATATTCACACGTAGTTACTCAATACTACGG
TGTTATCTTCTCAAGAATATAAGAAAAATAATTGCACTTTTGAAAAAAAT
AAAATATGACATGATCAAGGTTAATAGACCATCATGTAAAGGGGCTTGCT
AGAATTTTCAATCTGACGTATTGTACCGACTGCTGGGGAAGACAGGCAGA
TTTTGATAAAACACGCAACCACTTATAGTTTATGACGTCACTTTTGCTAG
AATTTTTAATTCAATGTATCCAGTATCGTTACGACAGCTGAGCAAGAAAA
ACAGATTCTGACAAAACACGCAACCACTCATCTACTTTGACATAAATATT
AAAAGCGTAGTGGAAGTCAAACATATGTTGTACATGCGTTATGGTATAGC
CTTGTATTTCTATTAGCCTTGGGCATGATGTGCCTGAGAGTACTTTCGAT
TGTTGCTAAGTCTTATCTAAAGTCACATTCACTTTTTAAGACGAAGTATT
TTTTTTTCTATTTTCAGATGACTTGATCTTAACGTTTGAGAGATTTCATT
CATTTTTACGTACCGTTTTTAATCTTCTCTCAATTCTATACAAATACTCA
TACTCAGAAAAGAACCCTGCACATTTATCTTTGCCCAAAGCTCCCCTCAC
TCTAAAACCAGCCCTGATCCTAACCTATAAGTTTTCTATGAATTACCTTA
ATTATATTTATTCAAAATTAGATGTGAACCACCTAAAGAATTACAATGAT
GACGCCATGGCTTGCCAGTCTTCTGACTCTGACTTGAAAGAAGTAAGTGG
TTAAAAAAAAAAATAATATATCATAATCTGATTTATAGGCTCCAAGCAAC
AAAATGTGTGGTCATAACAAACACTCAACCTCAATTAATAAAACATCCAG
CGCCGAATTAGAAGAGACTGTAAAAGAAATGGTTAATTATTGGATAACAA
CTCTCCCTGGAGATACTAAGATGGATACCGAAGTCTCAACTGAGTCATCA
TCCAATGACAATGATCAATGGTATAATGAAATTCATCATTCTTTCTTCTT
TTGTCAAAATATGTAGGATATGTTATTCGTGATTATTTTATAGTACAAGT
GTACCACAAAATAAAAGAATACCTATTGGACCTGATGTATCAGCTTCAGA
AAAGCGGGAAATTCGAAGGAAGAAGATCTTGAAAATGGTGAATGATTTAA
TGAAGAAACGCAGAGAACAGGTTAGTCAATATTCATTGAACCCTCTTTGT
TTATTTTTTAATAGCTTGTATAAATCATTTTGTTTGTTCATAGTCAACGG
TTGATGATGAAGGCGTCTCAAGACTTTTAACAGAGTTTACTATTTGTTTC
ATTATGCGTGGCTATGGAAATATCATTGGAAATTTAAGATTAAAATTAAT
GACTGAACCACCAACATCCACATTTACAAACATGCATTCTCGTTTCCTAT
GGTTAATAACTTTCTTTATGAGCTTTGTAGAAGATTTGGAAGTAGAATTA
CCAGTGATAGAGTATGTACTTTTTCAATGATTTTTTTCGCTTGATAGCTT
GGTGCTATTTACATTCCATTTCAGAGCAGTGTTTTCTCCAGAAATCATGT
CAAATATTGTATTTGAAGGCTTACATACATTGGAAAATCTTGAGATTGAA
TCAAATTCAGATATGCATTACGATACTGTGTTCAAAATACGTCAGCTTCA
CCTAGTTGTTTCTGCAATAAAGCAGATTTTAATCACCATTAATTTGATGG
AGCATAATGCATATAACACTGAAACGCGTTATAAAATACATAAAATCATT
TGTTTATTTATGGAAATGAGAAATTTGAGACACTTTCATCTTTTATTGAT
TTGGAAATTCAATTCATCTCATCAAACAAGGGCCTTCATCAATGATGCCA
TCATGTCCAACCATCAGCTCCTTGTAATGTTTGAAAAAGTTGAGTCATCT
GACAAATTTATAAATGAACACTTGGATCAGTGA
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