EMLSAT00000009511, EMLSAT00000009511-705358 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000009511
Unique Name	EMLSAT00000009511-705358
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s612	supercontig	LSalAtl2s612:149458..156023 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000009511 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000009511	EMLSAG00000009511-692277	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000042211	EMLSAE00000042211-751139	Lepeophtheirus salmonis	exon
EMLSAE00000042212	EMLSAE00000042212-751140	Lepeophtheirus salmonis	exon
EMLSAE00000042213	EMLSAE00000042213-751141	Lepeophtheirus salmonis	exon
EMLSAE00000042214	EMLSAE00000042214-751142	Lepeophtheirus salmonis	exon
EMLSAE00000042215	EMLSAE00000042215-751143	Lepeophtheirus salmonis	exon
EMLSAE00000042216	EMLSAE00000042216-751144	Lepeophtheirus salmonis	exon
EMLSAE00000042217	EMLSAE00000042217-751145	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto773308	auto773308	Lepeophtheirus salmonis	polypeptide
EMLSAP00000009511	EMLSAP00000009511	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s612:149458..156023-

protein sequence of EMLSAP00000009511

>EMLSAP00000009511 ID=EMLSAP00000009511|Name=EMLSAP00000009511|organism=Lepeophtheirus salmonis|type=polypeptide|length=441bp
KSVRFGSSGPGSSSFFTLSYFLIGGGNLLDPSYAPCYTDIEMAKTYDYLF
KLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKL
QIWDTAGQERFRTITTAYYRGAMGIMLVYDITNDKSFDNIKNWIRNIEEH
ASADVEKMILGNKCDINDRRKVTKEKGEDLAIEYGIKFMETSAKSSINVE
EAFFTLARDIKAKMEKRLEASNPPRQDRGHQLGKDDGRGRNIMQWFSRCS
ILSNNMRDIINISQGSQFCVSKKMLPAQIQLIIGPMFSGKSTELIRRLKR
YQIAKYKCLNIKYAKDTRYDSNAISTHDRIVLDAVSSLSLDTLKERAMDF
DVIGIDEGQFFPDIVSFCETMANSGKIVVIAALDGTFQRKGFPNIMELVP
LSESVTKLNSVCMICYGEGSYTKRTTNEKEIEVIGGTETYM

mRNA from alignment at LSalAtl2s612:149458..156023-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000009511-705358 ID=EMLSAT00000009511-705358|Name=EMLSAT00000009511|organism=Lepeophtheirus salmonis|type=mRNA|length=6566bp|location=Sequence derived from alignment at LSalAtl2s612:149458..156023- (Lepeophtheirus salmonis)
AAGAGCGTGCGTTTTGGCTCCTCCGGCCCTGGGAGCAGCTCCTTTTTTAC
CCTTAGCTATTTCCTCATTGGAGGCGGAAATCTCCTTGATCCATCCTATG
CTCCATGCTATACAGACATAGAAATGGCCAAAACCTACGATTACTTGTTT
AAGCTTCTTCTGATTGGAGACTCTGGAGTGGGAAAGACCTGTGTTCTCTT
TCGTTTCTCAGAAGATGCTTTCAACTCCACCTTCATCTCAACAATTGGTA
AGACTCCTCTTTTCCTCGAGGATCTATTCATTCACCCCTCATTCTCCTCT
CTCCTCCCAGGTATCGATTTCAAGATCCGAACAATTGAGTTAGATGGTAA
AAAGATTAAATTACAAATATGGGACACAGCGGGCCAAGAAAGATTCAGAA
CCATCACCACAGCCTATTATCGCGGGGCTATGGGTATCATGCTTGTCTAC
GATATCACCAACGACAAATCCTTTGACAATATCAAAAATTGGATTAGGAA
CATCGAAGAGCATGCATCCGCAGACGTTGAAAAAATGATTCTCGGCAACA
AGTGTGACATTAATGATCGGCGAAAAGTAAACTCGGATTTCTTTTAGAAC
TCATTACTATTTTCTTGCTCTTTTACAAAGAAAAATTACATTTTAGTCAA
TTTTTGTTTAAATTAATCATATGCCTTGTTCCATACTTATTTTTATGTTT
ATAGGTTACCAAGGAAAAGGGTGAAGACCTTGCAATCGAGTACGGCATCA
AATTCATGGAAACATCTGCTAAGTCTTCTATAAACGTCGAAGAAGCCTTT
TTTACTCTTGCTAGAGACATCAAAGCGAAAATGGAAAAACGATTAGTAAG
TATTGTTTATGCAGACGTGTACATCTATGTTTTTATAACTATAAGAAAAC
ACACAATTCATTTATAATGATTTAAATATCATTTAAAAATAACTGTAATT
AACTCCGATATCTATTTTTTTTTTTTCTTATTCTTTCTTCGATGATGTGT
AGCAGGTAATTAAAAAAATCAAGATTATTGGTTTATATTTTTGTTTTATG
TATGTGTTTTAATCACTTGTAGATTTTTTTTATTTCTTTCTTTTATAAAT
GCATATTTAAAACGAGACATTTAATTTTATAATAGTCCAAATTTGAGTAC
GTACTTTTTAAATAATCCTTCTCATACCATCTAAGATATGGAACTTATTT
TAAAGACTCGTTATAATAATTTTGATTACGATGGACTTTTTTTTGTTCTT
CACTAACTGTAAGTTAAGAAAAGGAGTCTTGAATAAAGTAAATTTCATTT
AATCCGCTAAAATCTTATTCCTCATTGACCAGTAGTATTTTAGTATTTGT
TATTAGCATGTCTGACACAGATGTTGAAGATTTAGTGTATGTCATTTTAC
TGTGCCATAGCTTCAAATACATTAGTTGATAGTTGTATTAGTATTAAATT
TGTAAAACTTATTGGGTAGAGTTGATGATTTGATTTAGCATGACGATAAT
ATACAATTTTAGTTTAAATCTCTCTTATTTTGTGTTTAGATTAATTAATC
CCTGAATTCCTTTAGTAGTGTTGATATATTTTTAATTAATTATGTACTGG
GGAAAAAAAATATATTATGTAATTATTCAATATTGGTTGTTTATTTCTCC
CTATTATATTATCCAACCGAGTCGGATATTTTGATTAACAACAAACTCCC
TTGTACTTAATTACGTCTTTATGTATGTATAACCTATACAACAAAAACAT
AAATAATAATTATTATCATTGTTAGAAGAGACATAAATTCGGGGCATATG
TACTGTTGTTGTATATGTTTTTCATGAAATGAAGGACAAATTTGATTCAT
GCTATTTTTAACTTTTTATTTTGCGCTTTTGTTGATTATTTGTTTGATTG
ATGCAATTAAGATTTAATTTAGGGCTTTGATGTTTTTGTATTTATTTATT
TATAGAAATATCCATATTCATATATTTTTATTTACTTTTTCAGGAAGCAT
CCAATCCTCCGCGACAAGATAGAGGTCATCAGCTGGGAAAAGATGATGGA
AGAGGTCGTAATATAATGCAGTGGTTCTCTCGATGTTCGATACTGTGATA
AATATTTTATTTACTTATTATTTTTTTTNNNTTCAAGAAAAAAGAAACAA
AAAAAAATTTTTTTTAGAAAAAATATACTTAAAACGTCTCTCCGCCGCCT
CACCAATTTTTTTTTTTTTTCCATTTGATTTCTAAAYACAGWTTCGATTW
TTWTRTTTTTTAATTTATGTTAAAAAATATATATTTTTTCCCTATGGTGG
AACTGTTACATAAAGAATTGAATTTTTAGAAAACATTGTTAATAAGTACT
ATTTGGAACAGTGTATTTTTTCTCTCTCCAAAACGTCTGTTTATTARMAT
ATGTGTGTTTTTTAAAGTGATTTTGTGGTTGACAAGAACAAAACAAGCTT
GAAATATGTTACTGCTCTATTCCTTTTATATGTGTTTGATATTAACTTAA
ACTATTAAATCTTCTTATTGATATGCATAAGTTAAGTCTAGATTAGGTAG
TATGTACATTAATGAGCGTCCATGATAATTTGTATCATTATAATCAAAGG
GGAGGGGAGGGAGGTGGCATTACAAGTACCAATGCGATGGAAATTAAAAA
AATAATTAGTTCATATTGTTCTAAAAATAGATATCATTATTAATTAGGTT
GCACAATTTATTGATCTCCAATTAGTTGTTAAATAAATTATGATAACAAT
AATAATCGTTTGATGATCATATTAATCATACATATATTATTTAATTAATG
AAGAGATATTCTTTCATTATCATTCTATTTCATTTTAAATACATCTGTCT
TATTTTGACTTCTTTCCCCCCCCCCCCAATCTTTCTTGCTTTATTTATGC
ATAATATTCTTATTGCGCCCTTGAATATACATAGGATGTAGTATACTTGT
TCTTTTTGCTTAAAAACCTATTTTTTTTCATTTTAAATAAATGTATATTG
ATAGAGTATTATTTTACAACTTATCATATTTCTAAGATAACAAAAAATAG
TAGATACATATATGTTGTGTATTCGTTGTAAGCAAAAAATGGGAATAATA
ATTTTAAATGAAGGAATTACAGTACTTGAATGAGGATAATGATTTATACA
TTAATGGTGTAATTTTTGACTATTTTACTGTAAATTTCATTATCAAGTTC
AAATGCTTAGAGTTATATCAGTCATCAACATATAATAACCATATAATTTG
AATAACTCAAAACGAAATGATAGTATCAATTAATAGTTGGTTACTAGAGT
GACCAATTTAGTAGTTAATTGATGCATTTAAAAAGAAGAAATTACAACTT
GTACACATCATATATATAAAGCGGGTAAGCAGACTTTTCAAGGATTTGCT
CCATGCCAATTTTTGATGGCTGTAATTCCTTCCATATCCAACGTCTTAAG
TATTAACAAATGTTATCCCCCTCTTGCCAAAGTTCAATGTGAATCATGTT
ACAAATTTATTGTTGTTCATATTGGTAATACTATGTGTTTGAGCTCCATG
AATATTCCTATGTGTTTATCAAGGCTTGAAATCAACTGCAAATGAAGTAT
AATAATTTCTTTCATGAATCTTTTTGAAACATATCCTTAGTTCCTTTTTT
AATGAATAATTAAAAGTTTATTTATCAAATATCCAGTAGATATGAATCAA
GTACTCGTCAATATTTATTTATAATACATCGATATAATTAAACTGAGTAA
TTCGTTGTGTAGATCTACAGAGCTAGATTGTTAATGATCCGAACTAACAT
TCAATTTATTGTACTTATCAAATAATCATGAGATGGAAAGGCTTATTACG
TGAAACCCAGGCTAAATTTGATTTTATGTTATGAACGAAATGATAGGATC
TGATAATATGATCACTATTAAGTGACAGTCAACTAATACCATTTATTTAC
AAGGAGAACTTGACAATTTATATCTTGATGGAACTTTTTAGATTGGTAAT
TTATATATTTATCAGTCCCGGTCCATTAAGAAAGACACGAGTCCGGACTC
GAGCACTGGTTTATACATACTTCAATTTCTAGGGCAAGCATATAAAACTT
AAGAACTGGAGATAGTTCAAGACATACTATCATATCATACGGTTTATCAG
TGAAGGAGTTGAAATGAGATCAGAGGCCGAGAGGCAAGGAGGCTGCTTTT
AAATGTATAATAAAGGAGCGGTTTGAAACTCCCAATTATGAGCCAGATAA
AAATAAATAGACTCCTGAGCAATGAGATGAATTAACTTTTTTAAATTTAT
TAACAACTAATTATGATTGATAAGTTTTGTATTTTTTCCCCTAACCGTAA
TTAATAAAAAGTTAACCATTAAAAAAAGTAAACAATTTTGTAATTATTTT
AAGAAATTCCTTCATACATAATAAGAAATCGAAATCGTCCATAAAAATGT
TATCGGAACCAGAATCGGCTGAAAACTTTCTATTGATACATCCTTAATAA
TAGGCAATATAACTATATTTCTTTTTACTTTTATTATAAAAAGTCATTTT
CTTGGAATTCCCTGGATAATGCGGCCTGGGACTTGTTGAGTACCCTTGGA
GTATACTACTATCCTGAAAAGTTTCATCAGGATATGAATTGTCGAGGTTA
TAGGGTTTTCACATCTTTGACCATATTTTTTATATAACTTAAAATAATAA
TTTTTCCGAATTATTAACATTTCACTTTGCCCTGAAATGTATTTTTATAC
AAATTAASTTCGTATAAGTTTATAATACTCCTAATTATACATATTTTGAG
TTATGAGGTTGAAATTCCAATTGAGTAAATATCACTCTATGTGCCTTCTC
TATCCTATGAATTATAATTTTCGGATAAAAAGTTTTTTGCAGGGATAAAA
TATAACTTTTTTATTCATTGACTTCCTGAAAATGACTAACTGTATGCTCT
TTATTCGAAAAAATAACAAAAAAACTCTTACATAAATTAGAAAAAATGAT
ATAATTAATTTATTCAAAATGTATAATCATTTCSAGAATCGTTTCYGTAA
TAAATGGCCATTRGTTGAAATTTTTTCTCATCTCACGAAAATCAAACGCG
GACACTCTTGCAAACAATGAATTATCCNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTACTAGAGAAAAGACGCAGA
GGGTTAAAAGAAACGAGAGGATATGGGAGGATACTGGTTTTTTATAGTAA
CAACAGCGGYCAGSCCCCCAACAGMTTGTGTATTAATAAAAWACCGAATA
CGTATGCGGTCTGCTTATAAGAAGAAGTAGGAAAAAAGAAATTGGAGGGA
AGCTTAGTTCAGTAGGGCAGTTGCGGACACTTCTTTTGGAGTCGGGGYTA
TAATTCAAATTTTTATTTACTATAGTAGTAATAATATGAGAGACATCATT
AATATTTCGCAAGGTTCCCAGTTCTGTGTATCGAAAAAAATGCTCCCCGC
TCAGATTCAGGTATTTAATGTAGTTTATAACGTATTATCATTAAGTAAGG
GCTTCAAGGAGGGATAATTTCCTTGAATTTTAGGGGAAGTTTGTCAAACT
GTCTGACATATTGATTGTCATTTAACTACATTATTTTATTTTAATTTGTT
CATATTGAGTCACTTTTAAAATGGTTCATACAAAGTATTATATGGATATT
ATGTTCATAATTTATTTAATTAGTCCATTATATGTTCATTAATAATATTA
TATTTATCATTTAATGAAAAAAATCAGTTGATTATTGGGCCCATGTTCTC
TGGAAAGTCCACAGAGCTTATTCGACGTCTTAAACGCTATCAAATTGCTA
AATACAAATGTCTCAATATCAAATATGCCAAAGATACTCGCTATGATAGC
AACGCCATATCCACCCATGACAGAATAGTTCTAGATGCCGTGTCTTCTCT
ATCTCTGGATACGCTTAAGGAGAGAGCCATGGATTTTGACGTGATTGGAA
TTGATGAGGGTCAATTTGTGAGTTTTTTTTCAAGCTATAGTATGGCCTCC
CTATGTATAATTCCTTTGTTTAGTTCCCAGACATAGTATCCTTTTGTGAG
ACGATGGCAAATAGTGGAAAGATTGTTGTTATTGCCGCCCTAGATGGCAC
ATTCCAGAGAAAGGGATTCCCCAATATTATGGAGTTGGTGCCTCTCTCTG
AAAGTGTGACAAAACTCAATTCCGTTTGTATGATTTGCTACGGTGAAGGT
TCTTATACCAAAAGAACGACAAATGAAAAAGAGATTGAGGTGATTGGTGG
AACAGAGACTTATATG

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