EMLSAT00000009538, EMLSAT00000009538-705385 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009538
Unique NameEMLSAT00000009538-705385
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s613supercontigLSalAtl2s613:228398..230941 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009538 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009538EMLSAG00000009538-692304Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000042342EMLSAE00000042342-751270Lepeophtheirus salmonisexon
EMLSAE00000042343EMLSAE00000042343-751271Lepeophtheirus salmonisexon
EMLSAE00000042344EMLSAE00000042344-751272Lepeophtheirus salmonisexon
EMLSAE00000042345EMLSAE00000042345-751273Lepeophtheirus salmonisexon
EMLSAE00000042346EMLSAE00000042346-751274Lepeophtheirus salmonisexon
EMLSAE00000042347EMLSAE00000042347-751275Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774904auto774904Lepeophtheirus salmonispolypeptide
EMLSAP00000009538EMLSAP00000009538Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009538

>EMLSAP00000009538 ID=EMLSAP00000009538|Name=EMLSAP00000009538|organism=Lepeophtheirus salmonis|type=polypeptide|length=574bp
MNWSVLCCKERYSLWQISLLFFATLLLAFIFFFTFVAXNSSIISYSDEEF
ADLDKNSNYAVVIDAGSSGSRVYLYVWPSHSGNPHELLKISPLRNFENQP
YPLLDFAQEHIPSSKHKETPLFILATAGMRLLGRDKQLNIMKHLGITVNE
NSNFIFPENNLEIITGKQEGIYQWLXINYVLGKFTNHYTAYENGRPLLHK
RPTTVGVMDMGGASMQIALEVADSVKNYPHVVEINLGCKEHDSEHTYRVY
IMTYLGYGANEALSRMERQXLVSQNFNNRIDSTSKLENPCYPNGLEYESS
LKIDIDKLTNVSPSIKSQLNQDQKIYFIGTGNWNKCYEAIAKFTEKRDSY
VECDTVCPDDGIQLPSFKFERTKFYGMSEFWYSMNDVFQMGGHYNYNKFA
DASKAFCNESWKKTLEVHSSEHLEDMRMETQCFKSAWICAVLHEGYKFPK
SYTKLTSSPSTINGEVVHWTLGAILYRTRYFPLRAIEMQMKNKSRRYSHH
PTLSILSSQYMVLLCLLLVIVVICVYLRRLKQYVNPSRTLRRVPSALSVW
LNDYKEDSTHLLGHNTLKSIFIQK
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mRNA from alignment at LSalAtl2s613:228398..230941-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009538-705385 ID=EMLSAT00000009538-705385|Name=EMLSAT00000009538|organism=Lepeophtheirus salmonis|type=mRNA|length=2544bp|location=Sequence derived from alignment at LSalAtl2s613:228398..230941- (Lepeophtheirus salmonis)
ATGAATTGGAGTGTGCTATGCTGTAAAGAGCGATATTCTTTATGGCAAAT
TTCCTTACTATTTTTTGCCACCCTACTCTTGGCCTTTATCTTCTTCTTTA
CATTTGTGGCGGRTAATTCTTCGATCATTTCCTATTCAGGTTTGTTTGAC
GTCCTTCATTTATTATCTTTTGAATATTTAATTAATCGATCAATTATGTT
TACTATTCATAACAGATGAGGAATTTGCTGACTTGGATAAGAATTCCAAT
TACGCTGTAGTAATTGACGCTGGAAGTAGTGGAAGTCGAGTGTACCTCTA
TGTTTGGCCAAGTCACTCAGGAAATCCTCATGAGCTCCTCAAGATCAGTC
CATTGAGAAACTTTGAAAACCAACCCTATGTGAAAAAGATTANCACCGGG
TCTATCAAGTTTAAGTGAAACGCCAGAAAGATCGTATATATACATTAAGC
CTTTGTTAGATTTTGCTCAAGAACATATTCCCTCCTCCAAGCACAAGGAA
ACTCCGTTATTCATCCTTGCTACTGCTGGAATGCGACTTCTTGGTAGAGA
CAAACAGTTGAATATTATGAAGCACCTTGGGATAACAGTGAATGAAAATT
CAAATTTTATTTTCCCTGAGAATAACCTTGAAATTATTACTGGGAAACAA
GAAGGGATCTATCAATGGCTTMCCATCAACTACGTTCTTGGAAAGTTTAC
TAATCACTATACTGCATATGAAAATGGTCGGCCTTTGCTTCATAAAAGAC
CAACAACTGTTGGAGTTATGGATATGGGTGGAGCATCTATGCAAATTGCT
TTAGAGGTTGCAGATTCAGTTAAGAATTATCCTCATGTTGTAGAGATTAA
TTTGGGGTGCAAAGAGCATGATTCAGAACATACATATAGAGTTTATATTA
TGACATATTTGGGATATGGTGCTAATGAGGCTCTTTCTCGAATGGAGCGG
CAGMTCCTGGTTTCACAAAATTTCAACAATAGTACGGGGMATGTGTGCAA
TGATTAATTATTTTATTTACTTATTTTTATAATTTCTAATAGGAATTCTA
CAATTAAAGGAATTGATAGTACGTCAAAATTAGAGAATCCTTGCTATCCT
AATGGATTGGAATATGAAAGTTCCCTAAAAATAGACATTGATAAACTAAC
CAATGTTAGTCCAAGTATCAAAAGTCAATTAAATCAAGATCAAAAAATAT
ACTTTATAGGAACTGGAAATTGGAATAAGTGTTACGAAGCTATAGCTAAA
TTTACTGAAAAAAGAGACTCTTATGTAGAATGTGATACTGTTTGTCCTGA
TGATGGTATTCAACTTCCTAGTTTCAAATTTGAACGTACAAAATTTTATG
GAATGTCTGAATTTTGGTATTCTATGAATGATGTTTTCCAAATGGGTGGT
CACTACAATTATAACAAATTTGCTGACGCCTCTAAGGTTGTATATAAATT
AATTATTCATACTATAAGAGTACATAATATACTCGATTTTTGTAGGCCTT
TTGCAATGAATCTTGGAAGAAAACCCTTGAAGTGCACTCTAGTGAACATT
TAGAAGACATGAGAATGGAAACGCAGTGTTTCAAAAGTGCATGGATTTGT
GCTGTTCTTCATGAAGGCTACAAATTCCCCAAATCTTACACTAAGTTAAC
GTCTTCTCCTAGTACTATCAATGGTGAAGTTGTGCATTGGACTCTTGGAG
CAATTTTATACCGAACAAGATATTTTCCACTAAGGTAAGCTTGTGTTTAT
ATCAAAGTAATATTATATGTATTGGATATTCGAAAACTGTGTAGCTTATT
CCAATTCTAATCTCTGAATTATTCAGTGTTTGAACCTATTTAACCTAAAT
ACAATTGGGTGGTTTACCATTTGAAAGCAATTAAGGAGATAAATTAAACT
TTTGAAATATATTTTTTGAATAATTTATTCATTAAATGCTCTACCAAGAA
AATTATGGATAATTTTTCTTTTTTTAGTTTTTTATGAAAAGTCATTCCCC
ACGATGTTCAAAATCATTATGTTGCTTAACTTGTTTTTCAACATGTATTT
TTTAGAAATTAAATATGTTATTTGCACGAAAAAATATTTACTGATAGATC
GACTTAAGTAAAGTAATACCGGTATCAAGCATAGGGATCCTAATTTTTTT
GAGCTCTTAAAATATATTATTGGTTTTAATGCAGATATGAATATTTCGTC
ACTTTTGAAAATATTTTCCCTTAAGAAACCATTTTAATTAATTTAACTTC
ATTTTTTTAAATCAATATAGAGCCATTGAAATGCAAATGAAGAACAAATC
CCGTCGATATTCCCATCATCCAACTTTGAGTATTTTAAGTTCTCAATATA
TGGTCCTTCTTTGTTTGCTTTTGGTGATAGTTGTGATATGTGTATATCTA
CGTAGACTAAAGCAATATGTTAACCCAAGTAGGACACTTCGAAGAGTACC
TTCCGCATTATCGGTTTGGTTGAACGATTACAAAGAGGATTCAACCCACT
TATTAGGGCATAATACACTTAAATCCATATTCATACAGAAATAA
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