EMLSAT00000009559, EMLSAT00000009559-705406 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009559
Unique NameEMLSAT00000009559-705406
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s615supercontigLSalAtl2s615:580102..582878 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009559 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009559EMLSAG00000009559-692325Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000042442EMLSAE00000042442-751370Lepeophtheirus salmonisexon
EMLSAE00000042443EMLSAE00000042443-751371Lepeophtheirus salmonisexon
EMLSAE00000042444EMLSAE00000042444-751372Lepeophtheirus salmonisexon
EMLSAE00000042445EMLSAE00000042445-751373Lepeophtheirus salmonisexon
EMLSAE00000042446EMLSAE00000042446-751374Lepeophtheirus salmonisexon
EMLSAE00000042447EMLSAE00000042447-751375Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778719auto778719Lepeophtheirus salmonispolypeptide
EMLSAP00000009559EMLSAP00000009559Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009559

>EMLSAP00000009559 ID=EMLSAP00000009559|Name=EMLSAP00000009559|organism=Lepeophtheirus salmonis|type=polypeptide|length=274bp
MKLEKDNAMDRADACEQQAKDANLRAEKAEEEVRELQKKMQQLENDLDQT
QEKLLNANQRLEEKEKALTNAEGEVAALNRRIQLLEEDLERSEERLAVAT
QKLSEASHAADESERMRKVLENRSLSDEERMEALENQLKEARFLAEEADR
KYDEVARKLATVEADLERAEERAETGETKIIELEEELRVVGNNLKSLEVS
EEKANQRETSYKEQIKTLTTKLKQAEARAEFAERSVQKLQKEVDRLEDEL
VHEKEKFKAISDELDQTFAEMSGY
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mRNA from alignment at LSalAtl2s615:580102..582878+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009559-705406 ID=EMLSAT00000009559-705406|Name=EMLSAT00000009559|organism=Lepeophtheirus salmonis|type=mRNA|length=2777bp|location=Sequence derived from alignment at LSalAtl2s615:580102..582878+ (Lepeophtheirus salmonis)
TGAATGGGGCTATCAAAGACCTCCTGATCCTCACATCATATTCTATACAT
AAGGATGCATCAATTTATTTTGTAGGCTAATGAGTATTAACTTCTTCGTT
AAAAAAAATAACCAAAAAAAATTCATAGTCAATTAGTCAACCAAAACCTT
TCCTATTCAATTACATAAATATCTACGCCTGTATCAAATATAGTTAGTAC
ATAATATACACGTATCTAGGTATATATTAAATTCTTTTGGATATGTATTT
ATAAGATGATATATAATTACGAGCACTTTTTTTCTTCCTTTTTTTAAATG
ACCCTTGGAGTGATTCCAGATGAAGAATAGAAATTGTTTCTTTGCTTTCT
ATTTACTTCATTGGGCTAGGGCAAAGTCTACATATAAAACATATTTTTGT
ATAATTTTAGACGAGAAGAGAAAGTCTTAACTTTTCAACTACCCAAAGTT
TGAATGTGAAGTAGTTGTTCCAAGTTGCTCATTTGGATCGGGTCTTTTGA
GTTCTGTGGAAACTTTGAGAGAAGCAAATCTTTTTTCAGTAGTGTTCAAA
AGTATCTTCAATTTCCATCAAACATGGATGCCATCAAAAGAAAATAGCAA
GCCATGAAGCTTGAAAAGGACAATGCCATGGACAGGGCTGATGCTTGCGA
GCAACAAGCTAAAGATGCCAATCTCCGTGCCGAAAAGGTATGAATCTCCC
ACTTCGAAACATATATATAGAATCCTCATCATATTCCCAATATAAAAATA
TACCTTTGACTTTACTCAATAAATTCTCATTTAGGCTGAGGAGGAAGTCC
GTGAGCTCCAAAAGAAGATGCAACAACTCGAAAACGACTTGGATCAAACG
CAAGAAAAGTTGTTGAACGCTAACCAAAGACTCGAAGAGAAGGAAAAGGC
CTTGACCAACGCTGAAGGTGAGGTCGCTGCCCTTAACAGGCGTATTCAAC
TCCTTGAAGAAGACTTGGAAAGATCCGAAGAGCGTCTTGCTGTTGCAACT
CAAAAACTCTCCGAAGCCTCCCACGCTGCTGATGAATCTGAGCGTATGAG
AAAAGTCTTGGAAAACAGAAGCTTGTCCGATGAAGAACGTATGGAAGCCC
TCGAAAACCAACTCAAAGAAGCCAGATTCCTCGCTGAAGAAGCTGATCGC
AAATACGACGAAGTTGCTCGCAAACTTGCCACTGTTGAAGCTGATTTAGA
GCGTGCTGAAGAGAGAGCCGAAACTGGAGAGACTAAGGTAAGATATCGGA
AGCAACTTAACATAAAAATTAAGATATTTTACAACACTTCGTCTTGTTTC
TTAATAGATCATCGAATTGGAAGAAGAATTGAGAGTCGTCGGTAACAATC
TCAAGTCTTTGGAGGTCTCAGAAGAAAAAGTAAGCGATTCAGAATAATGT
GGTTTTTTTTAATAATAAATGATTGAATAACTCTTTCTATTTATTGAAAT
AGGCTAACCAACGTGAAACTTCATACAAAGAGCAAATCAAGACTTTAACT
ACCAAGCTAAAGCAGGTAAATCCGTATTTTTGTTCTAGACTCTTACATAT
ACTCATAAACTCATACATATATAAATTCACATAGGCCGAAGCAAGAGCTG
AATTTGCTGAGAGATCCGTCCAAAAATTGCAAAAGGAAGTTGACAGACTT
GAAGACGAGCTCGTTCACGAGAAGGAGAAGTTCAAGGCTATTTCAGATGA
ATTGGATCAAACCTTTGCTGAAATGTCTGGCTATTAAGGAGCTATTTGAT
GAATTCTTTACTTTCGATCATAAATATCTTATTCAAAGTGTCATCTCTCA
GAATATGATAAGAAAGACTTGTTATCCCACAACATTTCTCTCTTTATATT
TTCAGTATCTTCTTTAATTTAAATAGTTATATAGATATTTGTCTATGTCA
ACGAATATATATTACATACAATGTCCTAGTTTTTGTCGGGTTTTTTTTTT
TTTTTTAAATTATACATTTRTACAGCGATACCTAAAGTTWTTTTGTTATA
ATAAACTATTGAAACAAATATACCAATTTCTTTATAAATATCAAAAAAGA
GACTTGATTTACATATGAATGTAGATTGACAGATTAATTATTTGACTTAG
TTTTGAAATGACCCTGACACCAGGGTAAAGAAGGAGAATAATAAGAAAAT
AGCTTTTAACAGGAAATTTCTTCATCTTATTACTATTGTATTAAAATATA
CTTGTACTGCGTATGTACGTATGCTTAACAGCTTCATGTTGTGACATACA
TATTCAACATAATCTTGGAATTACATAAGTTATAATAAGAAATGCTTCGA
TGGTAATGTAAGATGACTTTATTATCACTAATTAAAATTACTTATTTGTA
AATATAGAAACTAACATTGTGATAATACATAATATAATGGACACATTATT
ATTTTTCCATAAGGCTGCAAAAAGAACAAAAAATAAAGGAAGAAAGTGGA
TGTCCAAACAGTGTCATAAACTCATTTCTTTTCGACATTTCTTGAGGAGA
TACAACCGTAGACCCATTGTTCTCTGACAAGGTTGACTTATTTCTTCAAA
TGATGTATTGTATCATTGAGTTCTATGAGTTGCTCTAAAAATCCTTCATT
CGGAGCAATTGACCGTTTTTTCCTTGTGAATATAAAAAAAGATAAATAGT
TCGAGACAATTGAAAGATAATTACTTAATTAAAATAGGACATAAATATAG
GTACAATATATGAATGTGAAAGATGTATTATGTATATAAAAAACAATAAT
AAAGTATGTGATTCGTCAATAAAATTT
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