EMLSAT00000009563, EMLSAT00000009563-705410 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009563
Unique NameEMLSAT00000009563-705410
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s615supercontigLSalAtl2s615:626046..628492 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009563 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009563EMLSAG00000009563-692329Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000042467EMLSAE00000042467-751395Lepeophtheirus salmonisexon
EMLSAE00000042468EMLSAE00000042468-751396Lepeophtheirus salmonisexon
EMLSAE00000042469EMLSAE00000042469-751397Lepeophtheirus salmonisexon
EMLSAE00000042470EMLSAE00000042470-751398Lepeophtheirus salmonisexon
EMLSAE00000042471EMLSAE00000042471-751399Lepeophtheirus salmonisexon
EMLSAE00000042472EMLSAE00000042472-751400Lepeophtheirus salmonisexon
EMLSAE00000042473EMLSAE00000042473-751401Lepeophtheirus salmonisexon
EMLSAE00000042474EMLSAE00000042474-751402Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778971auto778971Lepeophtheirus salmonispolypeptide
EMLSAP00000009563EMLSAP00000009563Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009563

>EMLSAP00000009563 ID=EMLSAP00000009563|Name=EMLSAP00000009563|organism=Lepeophtheirus salmonis|type=polypeptide|length=536bp
MVATSGSDGIFTSNEDLRQXIYTKSVVLQXVEKYIKEEESRIQRLKGYVE
QYNKYLGSADGHEEDFVSNPLNSFILIKKLTSDFNDVYDLIKETSNLNKF
SENITDSRESNKWPTDEDLKGAASALIRLQEVYKINTRDMRNGRLNGVDY
GPQLTAHDCFELGRQTYNEGDHYRTEIWMTEALSRYDEEDEKTVSKGDIY
EYLGFSAYVQGHLRRALKFTNLLLKELPNHPRAIGNKLYYENAIMESGGS
GPSLDGSQRKGDDGLDELKEDAVLKEGTGSNAEELLYPETVRYQRLCRGE
SNEKKKFDRDLKCFLDFGKHPFMKIAPIKAEKLYSKPDIYIFHNVISDNE
IETIKNMANPRFKRATVQNAKTGELETANYRISKTAWIKSEENDVVKGIY
QRVHDVTGLNMETSEELQVSNYGIGGHYDPHFDFARREEKDAFSSLGTGN
RIATWLFYESEVEQGGATVFPVLDLTLWPQKGSAVFWFNLYRNGEGNEDT
RHAAXPVLKGTKXVSNFWIHERGQEFTRPCALTPFE
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mRNA from alignment at LSalAtl2s615:626046..628492-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009563-705410 ID=EMLSAT00000009563-705410|Name=EMLSAT00000009563|organism=Lepeophtheirus salmonis|type=mRNA|length=2447bp|location=Sequence derived from alignment at LSalAtl2s615:626046..628492- (Lepeophtheirus salmonis)
CCTATCAATCAAATGGTCGCTACATCGGGCTCAGATGGGATTTTCACCTC
CAATGAGGATCTACGGCAGSTCATTTATACTAAATCCGTTGTACTTCAGA
GKGTGGAGAAATATATTAAAGAGGAAGAATCAAGAATTCAACGGCTCAAG
GTTAGATAAATAAAGATCCACAATTTTTAGAGTTTATTTCACAAGAATTT
ATTGTTATAATTATTTACTTATGAACTTGAATCTGTAAGGTTATCCAACT
ATAATATCTTGRCCCTTAGTCGAACTTTTTAATACATTTATTTACGTCTG
TATTTTTTTTTTTTAGAGGTCACTTCCTGTAAATATTTTTTTTCTTCTTA
ATATTTACTGAACTATGAATTATAATATTTGTTGAAATGACTTTGTGATT
CCGTCCTTCTCAGCTCGCCTCCCCCTCCCCTCTCTCCCCTAATCCTCAGA
AAATGTGTTCGACACTTGTTGTCAATAATAAATTATATGTATATTATAAC
CTCGTTGAGTTCTTTTCTTTTGAAAAAAGTTGCATCAGTCTATTTAAAAT
AACAACAAAATAAAACATGAATTGACAATCCTAACTAATTATTTATATTG
ATTTCAGGGATATGTTGAGCAATATAACAAGTACTTGGGCTCAGCAGATG
GCCATGAAGAGGACTTTGTGTCCAATCCCCTAAATTCATTCATATTAATA
AAGAAACTAACATCAGATTTTAATGATGTCTATGATTTAATCAAGGAAAC
TTCTAACCTAAACAAATTTTCCGAAAATATCACTGATAGTCGGGAATCAA
ATAAGTAAATAACTTTGAAATTTCTCTGGATATTTAGTTAACCTCATTAT
ACAATTAGATGGCCAACAGATGAGGATTTAAAGGGTGCTGCTTCTGCACT
CATTCGTCTACAAGAGGTCTACAAAATTAATACAAGAGATATGCGCAATG
GTCGCTTAAATGGAGTTGACTATGGTCCTCAACTCACGGCACACGATTGC
TTTGAACTAGGTCGACAAACTTATAATGAAGGAGATCATTACAGAACCGA
AATATGGATGACAGAAGCCTTGTCTAGATATGATGAAGAAGATGAAAAAA
CTGTTTCCAAAGGAGATATATACGAGTATTTAGGATTTTCAGCTTACGTT
CAAGGACATCTTCGACGAGCTTTAAAGTTTACTAATCTTCTCTTAAAAGA
ACTTCCAAATCATCCACGAGCCATAGGGAACAAACTGTATTATGAAAATG
CTATTATGGAATCTGGAGGAAGTGGTCCAAGTCTTGATGGCTCTCAAAGG
AAAGGTGACGATGGATTGGATGAATTAAAGGAGGATGCTGTACTAAAAGA
AGGTACTGGGAGTAATGCAGAAGAACTTTTGTATCCCGAGACTGTTCGAT
ATCAGAGGCTTTGTCGAGGAGAGAGCAATGAAAAGAAGAAGTAAGTTTTG
AATTACATGTTGTTCCAAGGAAAATATATTCTACTTATTTAAATAAATTA
TTAGATTTGACAGGGATCTAAAGTGTTTCCTTGATTTTGGTAAACACCCA
TTCATGAAAATAGCTCCAATCAAAGCTGAAAAACTATATTCAAAACCTGA
TATCTATATATTTCACAATGTTATTTCTGATAATGAAATTGAAACCATCA
AGAATATGGCGAATCCTAGAGTAATAAATATGATAAATTAATAATCCTAT
CTTGTATGCATTGAAGTACTTTCTATTCAGTTCAAGAGGGCAACAGTTCA
AAATGCCAAGACAGGTGAACTGGAAACGGCAAATTATCGTATTTCAAAAA
CGGCTTGGATCAAAAGTGAGGAAAATGATGTCGTCAAGGGTATATACCAG
CGTGTTCATGATGTAACAGGCTTAAACATGGAAACTTCAGAAGAGCTTCA
AGTTTCTAACTATGGAATTGGTGGTCACTACGACCCACATTTCGACTTTG
CTAGAGTAAGCAAATGTTTAGATTTAAAAAAAAAATTGAATGAGGAATAA
ATGTTAACAAAACTTTGCATTCATTAGAGAGAAGAAAAGGATGCATTCTC
TTCACTAGGAACGGGAAATCGCATTGCTACTTGGTTATTCTATGTGTGTA
TTCTTCATAATTCTATTTTTTTATGTATAAAGTTGTTTTAAACTCTTAAG
GAATCAGAGGTGGAACAAGGCGGTGCCACAGTTTTTCCTGTTTTAGACCT
GACCCTATGGCCACAAAAGGGTTCCGCAGTTTTTTGGTTTAATTTGTATC
GAAATGGAGAGGGAAATGAAGATACTCGACATGCGGCTTKTCCCGTTCTA
AAAGGAACAAAAWGGGGTAAGACCCGTCTAGTAACAATGAGTTCCATATT
CTCGAATTTAATTGTATTTTTTTTAGTGTCAAATTTCTGGATCCACGAAA
GGGGTCAAGAATTCACAAGACCCTGTGCTTTAACACCTTTTGAGTGA
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