EMLSAT00000009627, EMLSAT00000009627-705474 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000009627
Unique Name	EMLSAT00000009627-705474
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s619	supercontig	LSalAtl2s619:14755..19285 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000009627 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000009627	EMLSAG00000009627-692393	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000042689	EMLSAE00000042689-751617	Lepeophtheirus salmonis	exon
EMLSAE00000042690	EMLSAE00000042690-751618	Lepeophtheirus salmonis	exon
EMLSAE00000042691	EMLSAE00000042691-751619	Lepeophtheirus salmonis	exon
EMLSAE00000042692	EMLSAE00000042692-751620	Lepeophtheirus salmonis	exon
EMLSAE00000042693	EMLSAE00000042693-751621	Lepeophtheirus salmonis	exon
EMLSAE00000042694	EMLSAE00000042694-751622	Lepeophtheirus salmonis	exon
EMLSAE00000042695	EMLSAE00000042695-751623	Lepeophtheirus salmonis	exon
EMLSAE00000042696	EMLSAE00000042696-751624	Lepeophtheirus salmonis	exon
EMLSAE00000042697	EMLSAE00000042697-751625	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto769164	auto769164	Lepeophtheirus salmonis	polypeptide
EMLSAP00000009627	EMLSAP00000009627	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s619:14755..19285-

protein sequence of EMLSAP00000009627

>EMLSAP00000009627 ID=EMLSAP00000009627|Name=EMLSAP00000009627|organism=Lepeophtheirus salmonis|type=polypeptide|length=691bp
MDDEQPHQELVKCVLVGDNAVGKTRLXCARACKQKVSLSQLLNTHVPTVW
AIDQYRIYKDVLENSWMVLDGVNVSLRLWDTFGDHHKDRRFAYGRSDVVL
MCFDIGRVSSLENCREMWYQQIRKFCPNTPVILVGCKNDVRFILHDEQYI
NYCKERSPLVRQVRERDLVFPEQGRAVANELGIPYYETSVLTYYGLNEVF
ENAIRAALCAKRAQRFWMTNLKRVIRPTLQEPHCPPRPKLPDVLPISSVY
GVDRIKLFDGQHFTDVIFLCGNVGFSAHKFILAASSPTLQRLLSIESFTS
STSDIAPTRSSSETSLVSYCLSSSPMFTGGEYFYDEETECLIPPSEHNTP
SKFSLLGNSPRFRGXGGRLSGTLHKSSSSFNLPYSCLSSSPQQSNSSSYR
PPETSRTLNHPAFTSLKVQQCESLNASGKVITSLQTVLTCSKIITPLSMS
QALRFIYTGTLEKAFDKLDELKQAAEFLDIPDLYNFIYHTKACHYSSENG
IQYLLCAQRGLEEICFIQGLFADIFFSLDDGTCSAHKPLLMARCDMMHAM
FSHEDFVEKSARVIKFPGVSRFTFQELLYYLYTDRTPPHVTATNCLGILE
IGNRLCLPRLISLIETAVVEKLSSTVNKGGDVTEDALKILEHCQIHNADQ
LNFDNYQRMLSEQERDKSPKNLKRTRNNSGCLCFSGKTIKS

mRNA from alignment at LSalAtl2s619:14755..19285-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000009627-705474 ID=EMLSAT00000009627-705474|Name=EMLSAT00000009627|organism=Lepeophtheirus salmonis|type=mRNA|length=4531bp|location=Sequence derived from alignment at LSalAtl2s619:14755..19285- (Lepeophtheirus salmonis)
ATGGATGACGAGCAACCTCATCAGGAATTAGTCAAATGCGTACTTGTCGG
AGACAATGCCGTCGGAAAAACACGTCTCMTTTGTGCACGAGCCTGTAAAC
AAAAAGTATCCCTCTCTCAACTCCTCAATACTCACGTCCCCACGGTTTGG
GCCATTGATCAATATCGCATCTACAAGGATGTATGTATGCCAATTTTCTT
ATTTAATTTTTGGTTAAGTAACATTTTTATATAGGTTTTGGAGAACTCTT
GGATGGTCCTTGATGGTGTGAATGTGTCTTTAAGACTATGGGACACATTT
GGGGATCATCACAAGGATCGTAGATTTGCGTATGGGCGCTCAGATGTGGT
TCTGATGTGTTTTGATATTGGGCGAGTGAGCTCTCTGGAAAATTGTAGGG
AGATGTGGTATCAGCAAATAAGAAAGTTCTGTCCCAATACTCCAGTTATC
CTGGTAGGATGTAAAAATGATGTTCGCTTCATTTTACATGACGAGCAATA
CATCAATTATTGTAAAGAAAGGAGCCCTCTTGTAAGGTTTGTAATAAGGA
ATGATTTTTCATGTTTGTACGTGCAGGATTTTACATATGATTAATGATTA
TCTATTTGATCTTTAGACAAGTGAGGGAAAGAGACCTTGTCTTTCCGGAG
CAAGGACGGGCAGTAGCCAACGAGCTGGGAATACCATATTATGAAACCAG
CGTTTTGACCTACTATGGCTTAAATGAAGTTTTTGAAAATGCTATACGAG
CTGCCCTCTGTGCTAAAAGAGCTCAGAGGTTCTGGATGACGAATCTTAAA
AGAGTTATACGCCCAACCTTACAGGTAAGGCCGTTATCAAACTAACTGGA
TTTTACTTCAGGTATTTTCTTCTTTTTAAGGAGCCCCACTGTCCCCCACG
TCCTAAGCTGCCGGATGTGTTGCCCATTTCTAGTGTCTATGGAGTCGATA
GGATTAAATTATTTGACGGCCAGCATTTTACTGACGTTATATTCCTTTGT
GGAAACGTTGGCTTCTCTGCTCATAAATTCATTCTTGCAGCATCCAGTCC
TACCCTTCAAAGACTATTGTCCATTGAGTCTTTCACATCTAGCACTTCAG
ATATTGCCCCTACACGGAGTAGTAGTGAAACTAGTCTTGTAAGTTCAACT
TGTATTTAAGGGAAATGGTGTATTTTATTCTCATTTTTTATTTGCAGGTT
AGTTATTGTCTAAGCTCAAGTCCAATGTTCACTGGAGGCGAGTATTTCTA
CGATGAAGAAACAGAATGTCTCATCCCTCCATCTGAGCACAATACACCTT
CAAAATTTTCTTTGTTGGGAAATTCACCGAGGTTTAGAGGCTGKGGKGGA
CGACTAAGCGGAACACTGCATAAGAGTTCATCATCCTTTAATTTACCGTA
TTCCTGCTTATCATCTTCACCTCAACAGTCAAATTCATCATCCTATAGGC
CACCCGAAACATCGCGCACACTAAATCATCCAGCTTTTACATCCCTAAAG
GTTCAGCAATGTGAAAGCCTTAATGCATCGGGAAAGGTGATTACCTCTCT
CCAGACTGTGCTTACTTGTTCCAAAATCATTACACCTCTTTCTATGAGCC
AAGCTTTAAGGTTTATCTACACTGGTACCCTGGAAAAAGCTTTCGACAAA
TTAGACGAGCTTAAACAAGTAAATAATTTCTATTAATCCTTTACCGGATT
TACATTTAATCATACATCTTTAGGCGGCAGAGTTCCTTGACATTCCGGAT
TTGTATAATTTTATTTACCATACGAAAGCTTGCCATTATAGCTCTGAAAA
TGGAATTCAATATCTACTGGTAAAATCAAATTTTTTCGTTGCCTCATTCG
GCACGAATTAATCATATGCATTAATATATATTTCAGTGTGCTCAACGAGG
TCTCGAAGAGATTTGCTTTATTCAAGGACTGTTTGCCGACATATTTTTTA
GCTTAGACGATGGAACATGCTCTGCTCACAAACCCTTGCTTATGGCACGA
TGTGATATGATGCATGCCATGTTTTCTCATGAAGATTTTGTTGAAAAATC
AGCTCGAGTCATTAAATTCCCAGGAGTTTCTCGTTTTACGTTCCAAGAGC
TCCTTTACTATTTGTATACTGACCGAACACCACCTCATGTCACTGCTACT
AATTGTTTAGGAATTTTAGAAATAGGAAACCGTCTTTGTTTACCGAGACT
CATTAGTCTGATTGAAACTGCCGTAGTGGAGAAACTGAGCAGTACAGTCA
ACAAGGGTGGAGATGTCACGGAAGACGCTCTGAAAATTTTGGAACATTGT
CAGGTAAGGGATAACTTATTGATGAAGTGTATTCATTCTATTTTAAGGCA
ACAATCCATTATTTTTAAGTAGACCCTCTACTATAAGGAAATGTATTTGA
TTGACCCCTTATCATTCCTTTTTATTTCTTCTACCCTGTCAAGAAAAGCT
TTGTACTCCACGTAATTTATGCTTTAATTGTTAAGTTTGAAAGTGTAGGG
AAATAAATTATTCGTTTAGCAAATAATAATTAGCATTTATATTTACCAAG
CAATCAACGCCGCCTTTAGGAATGTCATCAAAAATTCCTTGAAGCTACTC
AATTTATTCTTCAAATATTTTTGCAAACTAATTTTAAACACAGAATTGTT
ATTACATTCTATACTATNGTTACATATATATATATTCTCTACAGATTCAT
AATGCGGACCAATTAAGTGAATGGTGTTTGGCCTATTTAGCCCAAAACTA
CAACCTTATTTGTAGGAAATATCCTAAGGTTTTGCGGAGCTTGCATCCAG
AAAATCAAGCCACTCTAAATGTTCGAAGATGGCCTCCGATTTGGTAATTT
TATATATCTTAGATACTTATCAGGGCTCTCAAGTCTCACGGCCTGAAACT
CACGCCTTTCCATCCAATGTCACGCCACACATGTCATTTTTCACGCATTT
GTACTCTATAATCAATCATGATAGTATAAAGGGCTGTATAGAAATCCCAA
ATTCTTAAATGGGAGCCTCCTAACCCTGTAATAAAGGTCACAAACTAGAG
CACAAGTCCCGTTTTATAAATGTGGGGTTTGTTCTTTATTTGGGACGGCG
TTACTTATCAAACACAAAAATACCATATCTACATCAGCTGTCTATTCTCT
TGTCTGACCTAATACATCATGGTGGTTATGTAATTTATTTTTTTTGATAA
ATAAACGAAGGAATAATTAAAAAGGAATCCGTGTTAAGAAAAAAATAACT
TCAGTGATTAGAAAAAGAAAACAAAGTTGTGAGGTTTTTTCTCTTTTTTT
CATTGTGTAATAGGTTGCCGTGTTGTTAACTTCTTCCTCTGAAGTAAGCA
CTATTGCCTATCTTTGGAGTAAATTGTTTTAAAAATCCATAATAAAATAA
ATAAATATAAGTTTAAATATAATTATGATATTTTCCCAGCACTAAAGCTA
TTTTAAATGTTGTAGGCTCTTCTCTTTAAGAAAGAAATTCATTTTCTTCC
ATAAAATCATATAAAAGGCAGCTGATATTAACAGGGATCTCCCGTCTTCT
CCTTGCTCTCTTTTTTTTTCTTAGAAGGACATCGGCTCTTCTTATAAGTA
GTGTTTTGTTTAGGGGCTTGTCCACTGGATGATTATTTTTCGAATTAATT
TTTTTAGAAAAGAAAGCCCCTCCACTCCACCCGTTGTGGACGCTCCTATA
TTCTATTGGACTGGACGTAAATTTGGTCCAGTCCTGTCCTACTTTCGGTT
CATAAAGAAGGTAAAATTGATCCCTTGTGACACCATTGAAGGCGTTTTTC
CTTTTTTTAGTTATTCTTTATATAGTATAATAAATTATTTACTATGAATA
TAATTTTTATGATATTGTATTTTGCAAGATATGTGCAATTGTCTTAGTAA
TTATCTCATAGATCTTATTTGACTTTATATACAATCGATATTTGTAGGAA
AAATTCTAAATACCGAAAGTTAAGACCCGGTCCAAAGAACCGACAGTCCT
AGAAACCGGTCACGATCTTAAGGACTGATAGGATAGGTCTCACGGACCGA
ATGTTTTAAGTATCAGTCTGAAGGAGTCCCAAGCCGAATAAATAAGGCCC
AACACAACACTTCTAACAAGTAATAAAAAGTTTTCTACATTCTTAACCGC
CTCGGAGGAACAAGATTTCCTCCTCGTGTGACAGCGACATTTTTGAATCC
TAATAAATGAAAATATAGCATCGTTTTGAGAACGTTACTGTGTGAAACAT
ACCTTAATAACTTGAGATTCCAGTTAAATGAGATCATGTAAAAATATATC
TGCAAATTCATCATTTCTAAACTTGAGAGCCTTGTATTTAGAACTTAATA
TGTCATAAATATATCTTGTACTAATCCCTTGTTTTTTGTTTTTTTTAGGT
ATCTCAAAGACTTCGATAATTACCAAAGAATGCTCTCTGAGCAAGAAAGG
GACAAAAGTCCCAAGAATTTAAAAAGAACTCGAAATAACTCTGGATGTCT
ATGCTTCTCTGGTAAAACAATTAAAAGCTGA

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