EMLSAT00000009656, EMLSAT00000009656-705503 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009656
Unique NameEMLSAT00000009656-705503
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: no visible phenotype
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
S F164 UN47_9656 female
  1. Adult
 Normal
no visible phenotype 		14.10.2014 - 11:12
14.11.2014 - 00:00
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s620supercontigLSalAtl2s620:108361..109875 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009656 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009656EMLSAG00000009656-692422Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000042817EMLSAE00000042817-751745Lepeophtheirus salmonisexon
EMLSAE00000042818EMLSAE00000042818-751746Lepeophtheirus salmonisexon
EMLSAE00000042819EMLSAE00000042819-751747Lepeophtheirus salmonisexon
EMLSAE00000042820EMLSAE00000042820-751748Lepeophtheirus salmonisexon
EMLSAE00000042821EMLSAE00000042821-751749Lepeophtheirus salmonisexon
EMLSAE00000042822EMLSAE00000042822-751750Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772350auto772350Lepeophtheirus salmonispolypeptide
EMLSAP00000009656EMLSAP00000009656Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009656

>EMLSAP00000009656 ID=EMLSAP00000009656|Name=EMLSAP00000009656|organism=Lepeophtheirus salmonis|type=polypeptide|length=282bp
MKLLLTFSFLVSLGAVNAAZDWYSLRTTFSLLPFTGFWSQPRLEKEARSE
GYTKISDCSDGESFPGNRYIPNYDHPNIVLIYDVNGYIAGIQSIVDQDAW
DNGXVNFHEKSMYQPSTINGKEVFLTTAYFVDPQIICSTGRTRYQYKTQG
TGYTLIFQNGEDISQKNLMEIPLIEEDLKESDFWNEHLCFINMGKHYFNL
HYDPEESCGNLFPVQLIYEEGFLHGFVWQHFGTLPGDLWEHPPALAISRI
IKDPPTCILDAIATVGLSTMHVYFKNYLSICD
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mRNA from alignment at LSalAtl2s620:108361..109875+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009656-705503 ID=EMLSAT00000009656-705503|Name=EMLSAT00000009656|organism=Lepeophtheirus salmonis|type=mRNA|length=1515bp|location=Sequence derived from alignment at LSalAtl2s620:108361..109875+ (Lepeophtheirus salmonis)
TCATCATTTGGTTCATTACAAGTGCCGAACAATGAAACTCCTACTTACAT
TCAGCTTTTTAGTCTCCCTGGTAAGAAAAAAATATTGAATACTTTTTATA
TATTAAATAAATATGTCATTTCAGGGTGCAGTTAATGCCGCTSAAGACTG
GTACTCCCTCAGGACTACCTTTAGTCTCCTTCCATTTACTGGATTCTGGA
GTCAACCTAGGTTAGAAAAAGAGGCCAGATCCGAGGGATATACCAAGATC
AGCGACTGCAGTGACGGAGAATCGTACGTAATAGTACTCAGATCCATGAC
AATCACATTATGGATTTAATCATTATTTTAGGTTCCCTGGGAATCGTTAC
ATTCCAAATTACGATCACCCCAACATTGTTCTCATTTATGACGTTAATGG
ATATATTGCTGGGATTCAAAGTATTGTAGATCAGGTAAGATGGATATCAA
ATTATTTACCACATACTTACAAATTTACAATTCCTTTTAAATATGTATGT
TATTGTTTATGACGTAGGATGCCTGGGACAATGGCTAKGTAAACTTCCAC
GAGAAATCAATGTATCAGCCAAGTACTATTAATGGAAAAGAGGTTTTCCT
AACCACGGCTTATTTCGTGGACCCACAAATTATTTGCTCAACTGGAAGAA
CTCGTTATCAATACAAAACCCAAGGAACAGGATATACACTTATTTTCCAA
AATGGAGAAGACATTTCCCAAAAGAACTTGATGGAAATCCCTCTAATAGA
AGAAGATTTGAAGGAATCTGTAAGTGTACCACTATAATTAGAGTAGTAAA
TAATTTCAAGCACTAATATGGAATGTTTTAAAAAATAACAACTTAAAATA
AATAGACGCAATATCTAAACAGCTTTAGGGGAAAAAAACTCAGACGCTAG
AAGATGCTTATAATTTACAATTTTCACTATAATGTCCAAACTATTGTTAT
ACTTGTATTATTTAGGATTTTTGGAACGAACATCTTTGTTTCATCAACAT
GGGCAAGCATTATTTTAATCTTCATTATGATCCTGAGGAGTCCTGTGGAA
ATCTTTTCCCCGTTCAACTCATTTATGAAGAAGGATTTCTCCATGGATTT
GTTTGGCAACACTTTGGAACTCTTCCAGGAGATTTGTAAGTAGTTGATAT
ATTTGGGGGCTTCTAATTACACTAGTTTGATATTCCAATTTATCTTAATT
CCAGATGGGAGCATCCTCCAGCACTTGCAATTAGCCGGATCATTAAGGAT
CCACCAACCTGTATCTTGGATGCCATTGCCACTGTTGGACTCAGCACCAT
GCATGTTTACTTTAAAAACTACTTATCAATTTGTGATTAATTTTACTTCA
ATAATTGTGGACTCATTTTCTAAAATAATTATTATTGTATATCAAACCAA
AATATTTTGTCAGTTTTATTCCTCAAGGAAGAGTTTGAATTTTTTATTGA
GTAATTACATAATACTGTCAAAATTAATGTTAACAGAATATACTTAATAC
CAAATAGTACAAAGA
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