EMLSAT00000009674, EMLSAT00000009674-705521 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000009674
Unique Name	EMLSAT00000009674-705521
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s623	supercontig	LSalAtl2s623:293405..297867 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000009674 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000009674	EMLSAG00000009674-692440	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000042912	EMLSAE00000042912-751840	Lepeophtheirus salmonis	exon
EMLSAE00000042913	EMLSAE00000042913-751841	Lepeophtheirus salmonis	exon
EMLSAE00000042914	EMLSAE00000042914-751842	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto775976	auto775976	Lepeophtheirus salmonis	polypeptide
EMLSAP00000009674	EMLSAP00000009674	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s623:293405..297867+

protein sequence of EMLSAP00000009674

>EMLSAP00000009674 ID=EMLSAP00000009674|Name=EMLSAP00000009674|organism=Lepeophtheirus salmonis|type=polypeptide|length=328bp
MSWRDKSVGKPQNLTEIKPLIKSASSNRYSRHFNSPKKSHPRPLTSRVLR
GSTPCLSSNKESRASSGFQGQEDPRYKEDWITSMRVRLESLNLRSSDREE
KPRTVSRPKGLSSVSSNSLSLLPLAREVANSSGKFNSNQCLSNGLRSTMG
RAFRFNEDGFQKARNHPVMIEPQIKIAIEGDRMLSTEKGENFSGNFDNIE
RKNKSNVLNGKVLNQGKPRKVTSYQEDFGIKKLSTSNMRERISQPNGNGN
EFECLASSREHYPTHSYDSNKTMQPVQKDKLTISKPTIQMSSLTTYRKNT
DRPLNFMSLKPALRFNQQYRIPDQIDWI

mRNA from alignment at LSalAtl2s623:293405..297867+

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000009674-705521 ID=EMLSAT00000009674-705521|Name=EMLSAT00000009674|organism=Lepeophtheirus salmonis|type=mRNA|length=4463bp|location=Sequence derived from alignment at LSalAtl2s623:293405..297867+ (Lepeophtheirus salmonis)
ATGTCGTGGAGGGATAAATCAGTCGGAAAACCCCAAAATCTAACAGAAAT
AAAACCTCTCATAAAATCGGCAAGCAGCAATCGTTATAGTCGTCACTTTA
ACAGTCCTAAAAAAAGTCATCCAAGACCTCTCACATCAAGAGTTCTACGT
GGATCCACACCATGTCTTTCATCGAACAAAGAATCTCGCGCATCTTCCGG
ATTTCAAGGACAAGAGGATCCGAGATACAAAGAAGATTGGATCACAAGTA
TGCGTGTTCGGCTTGAGAGTTTGAATTTGAGATCGTCGGATAGAGAGGAA
AAACCCCGCACTGTTAGTCGACCAAAAGGTCTTTCATCAGTGTCTTCAAA
TAGTTTAAGCTTATTACCTCTTGCAAGGGAAGTAGCAAATAGCAGTGGAA
AGTTTAATAGTAATCAATGTCTCAGCAATGGTTTGCGATCGACGATGGGA
AGAGCGTTCAGGTTTTATACCTTATTATTTTTTGCATGAATACCCCTCTC
TTCAAGGATTATAAATATTTAAAAAAAATAAAAAATACCCTTGATTTTTT
AATTTATATATCAAACTCATTTCTCACGTGACTAAATGAATTTTTGAAAA
AGAAACAAAACTATTTATTTAAATGGGATTATGGCTTTTTAAAGTGTTCA
AAAATTCCAATTGCAGCGAAAAATCTTATATTTCTATTTGCAATCCCCCA
AATATTCATATCGAGATCAAACATCCAGTTTGAATAAATTAATTAGAGTT
GTTTATGAGTCCAAATAAACTAAGGAGTTGGTTTAAGTTTCAGTTCAATC
GTGTCTGAAGTCCCAGATTGGACTCAAGTGTGAATCACGTGCTGGAAGTG
CAAAATCTGAGTCAGTCATAATTCAAATTAATAGTAAATCATATAAAAAG
TGAAACCTTTTTTTCAAAATCCTAAAATTGATTTTTTTTTGGGGGGGGGG
GTTAGGTTAAATTTCTCTMCTTTTGTGGGGGTGGGGGGCTMCAGCCTCTC
CTCACCTGCGGACGTCCCTCATATCAATTATATCCTTTCAGATTAACAAA
GTTTGCATAAGTAATAAATTATATCTCTCGTCATTATGCGACAGATTCAT
AAACTTTTTCTTAAAAACTCCGTATAGAAACCATAAGTTGGTGACCAATG
TTTTAATATTACATACATATTATTTTTTGTAAAAAAACGGAAAAGAAGAA
GAAAACACCCCAGTTTTTCACTCACATTCTAATACTATTCTTACATATGT
TTGTAGATCTATTAGAAAACATAACTGTGTCTCATTTTGATTATTTTAAA
TCACTGCTTCAGAGCCCATGAGATCCTCCACTGCTGTGTGGTCTGCAATC
AGGAATTACATTGTATGTTATGTAGACTTAATTGGCCATTATGAAGGAAG
GGACGGAAATAGAGGGGGGAGCAGTTTTTAAAGTTATAATTGGTACTTAT
CGTTTAAAGAAAACAAGAATAAAAACATACACAAGAGTCCAAAGGGGTGT
TCCTTCCCCTTATTATTAGAGCATTTAAAACAGCAAAACAAAAATGCAAA
AATATAAATTTTCTTTTGAAATGAGGGCGCTATTATGCACTTTTTATTAG
TAATAATACCTTACTTTTGGTAAAACATAAGCACTTACAAGGGTTCCAAC
ATATTTTTTTATTATAATACAAAATATGACCAGTAGGCAAGTCAAAGAAA
CATTTATATTTAACATGTTGTTTAAAAAAAATAATCGCGGAACAAACTCA
TAGCTTTTCTCACTCAACTTTTCATTATGTTCATGGGAAATTAAACAAGG
ACGGATTCATAAATTACGCGTACTACTATTATCGACTCGGGTATTAATAT
AATTTTAAATACAAATCGTTGTCAAATACTATAGTTGTACCCTTAAATCA
AGCAAATTTATTTATTAGATAATTAAATAAAGGAACAAATTCATAGTTTT
CCACAACTTTTCATTTGAATTTACAATAGATTCAACGAGGACGGATTTCA
AAAGGCTAGAAATCATCCAGTTATGATTGAACCCCAAATAAAAATTGCTA
TTGAGGGGGACCGTATGTTATCTACGGAAAAAGGTGAGAATTTTTCTGGG
AATTTTGATAATATAGAGCGGAAGAATAAGTCCAACGTATTGAATGGAAA
AGTATTGAATCAAGGCAAGCCTAGGAAAGTGACTTCATATCAAGAAGACT
TTGGAATTAAAAAGTTATCCACGTAATCTTTCTTTTTTAAATAATTTCAA
ATGCACATAATTAATTAATTTATTTACTCTCAATATTTCTAGGAGTAACA
TGCGTGAGAGGATAAGTCAGCCCAATGGGAATGGAAACGAGTTTGAATGT
CTTGCTAGTTCTCGAGAACATTATCCTACCCATAGCTACGATAGTAACAA
AACTATGCAACCTGTTCAAAAGGATAAACTAACAATTTCCAAACCAACTA
TACAAATGTCTTCATTAACAACATATCGTAAAAACACGGATCGGCCACTT
AATTTTATGAGTTTAAAGCCTGCTCTAAGGTTCAATCAACAGTATCGAAT
ACCTGATCAAATCGATTGGATATAAAAAGAAGACATAAATGAGTACAAAT
TGGAAAAGAGTGAATGAACTTCCATCGTTTTATAAACAAAGATTATATTC
AGATAATGATCGTAGGTGTTTCATTGAAATGTGATTTATGGTTCCCCGGT
AAAAACAATTTATTGGAAAAAATTAAACCTTCAGCCTATTGTTGATTTTT
CATATGTTTACAAAAAATCTGAATACTGCCTATATAGACTTAAAAAAATC
CAATATCTTTTAATGTTTTTTACTTTCTTTATTAGACCACAATATTTGAA
TTGGGGCATTGTATCAAGATATTGGCAAATAATATAGGATATTTATCGGT
CCATATAAAAAGTATTTATTGAAATGTGTCTTCATATCTCAGATAGGATG
ATTTCTGACGATTATACATTCTATCAAACCAGTCTCATAAATTATTTATT
ATTAAGTTACAAGCGTAAATATAGGTACTGTATTATACAAAGTAAACAAT
ATAATTATAAATCTCCTATTTAGATAATATGTAATTATATATCTATAATA
ATCATAATCTATTTTAAATAATAATAGCAATAATTAATATGAATTATCAT
TATAATAAATTTAGAATCCAATTCATATATTTGGATACATCAACAAATAT
ACTTTGATCCCTAGAGCAAGTTGTTCCAGAACTCAGTACTCCAGCAAGTT
CGAATGATCCATCTTCATTTTGACAAGACAAGGGGCTTCCTGTATCTAAT
GCAATCTATCGAAATAACCAAAAAAATATATATATATATATTTATTCATA
GTTGTAATAATAAAATTATAATAATTACAAAGCAATTATCTTTGGCCATG
GTATTGTGGGATCGCTTTTCTCCCAGACACACGGTTCCTTGCAATGATCT
ATAAGAACTCTGAATATTATCAGGAGATTCGTTGGAAACTGGAGCGTTTC
GATTGCACTCATCCCTCTCCAGAATACTCAAAACCGTTGTTCTCAAGATC
CCATCCGTCACTTCTGTAAAAATTATTGGGTAGATATTAGAGCTCTCATA
TAAACTAAAGGAGTGATTTACCTGTGGGTATTTCATTTCGAATAGCTCTT
CCGTAGCCAGTGATAGTGCAATTGGATTCCTTGTATGATTTCTTGTCTGA
TTGAGGTAAGCAAAGAAGGCAGACTGTCTCTGTGAGTTCCATATCCTTAT
TTATTTGAATGATTCCTGAAATAGAGGGGGAAATCTATATAAATAAGTAT
GTCAAAGTAATGAAGAATAATTTATTTATTCGAACCAATGTCATTTTCTT
TCGTGAGAAGTCCAAAATCTGGATGCACTTCGACTTTTTTTATGGGTCTT
TCTTGGACTCCAAAGGGTAGATTTATCATTAAATTAGAATCCCCTGCAAC
TACTTTATATTTCTCAATACCACGACTCATTATCCTAAAAAATGATATGG
TATTTGTAGGTGATTGACACAAGAATAAACACACTACTATCTTACTTGCT
TGAACAGGATGCTGTGGTCATCACCAAGTCATTTCTCACTAGAGTCCCCG
TACAAATTAATTTATTCGTCTCCAAATCTACAATGGCAGTCAGCCAACAG
TAAATAACCGTTGATGTTACTTTAGCTTCATCCTTATTGTTGACTCTATG
CTGTGAACTACTGGATGAGGTTTTCCCAGTAACCCACGAGGCTACTAGAT
CTGGCAGAAAATTAGCAGCGGCTCTCCCAAAAGCCTGGAATACAGCTTGA
CCCCCAAGTACTCCACATTTCTCCTCCGACACTAAACGACGTTCAAAAGG
CCTATCTATGGATGGCGTGAGGGTTGTTGTTGCTATGATAGAGGCTTCCG
TCGTTGAAACGGTGGTGGTGGTGGTGGTATCTGTTGTTGATGTATCGGAT
GGGAGAGCAGCGG

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